RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 MUC17Q685J3 4493 aa2.21□□□□□ -2.06
RGPD4-201ENST00000408999 M0R2T5 61 aa2.21□□□□□ -2.06
RGPD4-201ENST00000408999 SPINK7P58062 85 aa2.2□□□□□ -2.06
RGPD4-201ENST00000408999 Q75L30 129 aa2.2□□□□□ -2.06
RGPD4-201ENST00000408999 ASB16-AS1Q495Z4 193 aa2.2□□□□□ -2.06
RGPD4-201ENST00000408999 A0A1B0GU33 70 aa2.2□□□□□ -2.06
RGPD4-201ENST00000408999 SEC61BP60468 96 aaKnown RBP2.19□□□□□ -2.06
RGPD4-201ENST00000408999 KTN1-AS1Q86SY8 53 aa2.19□□□□□ -2.06
RGPD4-201ENST00000408999 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
RGPD4-201ENST00000408999 P0C880 135 aa2.19□□□□□ -2.06
RGPD4-201ENST00000408999 LINC01558Q9Y6Z2 57 aa2.19□□□□□ -2.06
RGPD4-201ENST00000408999 CSAG1Q6PB30 78 aa2.18□□□□□ -2.06
RGPD4-201ENST00000408999 KRTAP29-1A8MX34 341 aaPredicted RBP2.18□□□□□ -2.06
RGPD4-201ENST00000408999 KRTAP13-1Q8IUC0 172 aa2.18□□□□□ -2.06
RGPD4-201ENST00000408999 NOTCH2NLQ7Z3S9 236 aa2.17□□□□□ -2.06
RGPD4-201ENST00000408999 DMAC1Q96GE9 116 aa2.17□□□□□ -2.06
RGPD4-201ENST00000408999 SSPOA2VEC9 5147 aa2.16□□□□□ -2.06
RGPD4-201ENST00000408999 KRTAP13-2Q52LG2 175 aa2.16□□□□□ -2.06
RGPD4-201ENST00000408999 Q5VV11 94 aa2.16□□□□□ -2.06
RGPD4-201ENST00000408999 HERC2O95714 4834 aa2.16□□□□□ -2.06
RGPD4-201ENST00000408999 CAMK2N1Q7Z7J9 78 aa2.16□□□□□ -2.06
RGPD4-201ENST00000408999 LCE2DQ5TA82 110 aaPredicted RBP2.15□□□□□ -2.06
RGPD4-201ENST00000408999 KRTAP10-8P60410 259 aa2.14□□□□□ -2.07
RGPD4-201ENST00000408999 FCGBPQ9Y6R7 5405 aaPredicted RBP2.13□□□□□ -2.07
RGPD4-201ENST00000408999 A6NN06 94 aa2.13□□□□□ -2.07
RGPD4-201ENST00000408999 H1FX-AS1Q4G0G2 97 aa2.13□□□□□ -2.07
RGPD4-201ENST00000408999 R4GN34 69 aa2.13□□□□□ -2.07
RGPD4-201ENST00000408999 M0QZ58 72 aa2.12□□□□□ -2.07
RGPD4-201ENST00000408999 RPL37P61927 97 aaKnown RBP2.11□□□□□ -2.07
RGPD4-201ENST00000408999 KRTAP17-1Q9BYP8 105 aa2.11□□□□□ -2.07
RGPD4-201ENST00000408999 SPATA8Q6RVD6 105 aa2.1□□□□□ -2.07
RGPD4-201ENST00000408999 PRAC1Q96KF2 57 aa2.1□□□□□ -2.07
RGPD4-201ENST00000408999 KRTAP13-3Q3SY46 172 aa2.1□□□□□ -2.07
RGPD4-201ENST00000408999 ROMO1P60602 79 aa2.08□□□□□ -2.08
RGPD4-201ENST00000408999 H3BS24 57 aa2.08□□□□□ -2.08
RGPD4-201ENST00000408999 KRTAP1-4P0C5Y4 121 aa2.08□□□□□ -2.08
RGPD4-201ENST00000408999 PLAC4Q8WY50 150 aa2.07□□□□□ -2.08
RGPD4-201ENST00000408999 SYNE1Q8NF91 8797 aaKnown RBP2.06□□□□□ -2.08
RGPD4-201ENST00000408999 A8MUU9 505 aa2.06□□□□□ -2.08
RGPD4-201ENST00000408999 C20orf166-AS1Q96NR2 134 aa2.06□□□□□ -2.08
RGPD4-201ENST00000408999 LUZP6Q538Z0 58 aa2.05□□□□□ -2.08
RGPD4-201ENST00000408999 XP32Q5T750 250 aa2.04□□□□□ -2.08
RGPD4-201ENST00000408999 A0A1B0GVY2 172 aa2.04□□□□□ -2.08
RGPD4-201ENST00000408999 KRTAP16-1A8MUX0 517 aa2.02□□□□□ -2.09
RGPD4-201ENST00000408999 MUC12Q9UKN1 5478 aa2□□□□□ -2.09
RGPD4-201ENST00000408999 TPRXLQ17RH7 258 aa2□□□□□ -2.09
RGPD4-201ENST00000408999 MDN1Q9NU22 5596 aa1.97□□□□□ -2.09
RGPD4-201ENST00000408999 KRTAP25-1Q3LHN0 102 aa1.97□□□□□ -2.09
RGPD4-201ENST00000408999 KRTAP3-1Q9BYR8 98 aa1.96□□□□□ -2.1
RGPD4-201ENST00000408999 A0A0A0MQY5 61 aa1.94□□□□□ -2.1
RGPD4-201ENST00000408999 KRTAP13-4Q3LI77 160 aa1.94□□□□□ -2.1
RGPD4-201ENST00000408999 KRTAP3-2Q9BYR7 98 aa1.94□□□□□ -2.1
RGPD4-201ENST00000408999 TNP1P09430 55 aa1.93□□□□□ -2.1
RGPD4-201ENST00000408999 H0YAA0 97 aa1.93□□□□□ -2.1
RGPD4-201ENST00000408999 FSIP2Q5CZC0 6907 aa1.92□□□□□ -2.1
RGPD4-201ENST00000408999 KRTAP10-10P60014 251 aa1.9□□□□□ -2.1
RGPD4-201ENST00000408999 PP632Q6XCG6 107 aa1.9□□□□□ -2.11
RGPD4-201ENST00000408999 C10orf95Q9H7T3 257 aa1.88□□□□□ -2.11
RGPD4-201ENST00000408999 KRTAP3-3Q9BYR6 98 aa1.86□□□□□ -2.11
RGPD4-201ENST00000408999 KRTAP15-1Q3LI76 137 aa1.86□□□□□ -2.11
RGPD4-201ENST00000408999 PRO2289Q9P1D8 64 aa1.85□□□□□ -2.11
RGPD4-201ENST00000408999 KRTAP12-2P59991 146 aa1.84□□□□□ -2.11
RGPD4-201ENST00000408999 NDUFAF8A1L188 74 aa1.84□□□□□ -2.12
RGPD4-201ENST00000408999 KRTAP10-6P60371 365 aaPredicted RBP1.82□□□□□ -2.12
RGPD4-201ENST00000408999 KRTAP19-2Q3LHN2 52 aa1.82□□□□□ -2.12
RGPD4-201ENST00000408999 MT1HL1P0DM35 61 aa1.82□□□□□ -2.12
RGPD4-201ENST00000408999 KRTAP10-4P60372 401 aaPredicted RBP1.81□□□□□ -2.12
RGPD4-201ENST00000408999 KRTAP4-5Q9BYR2 181 aa1.8□□□□□ -2.12
RGPD4-201ENST00000408999 LCE2BO14633 110 aa1.79□□□□□ -2.12
RGPD4-201ENST00000408999 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
RGPD4-201ENST00000408999 KRTAP9-6A0A140TA67 174 aa1.78□□□□□ -2.12
RGPD4-201ENST00000408999 LCE2AQ5TA79 106 aaPredicted RBP1.78□□□□□ -2.12
RGPD4-201ENST00000408999 LORP23490 312 aaPredicted RBP1.76□□□□□ -2.13
RGPD4-201ENST00000408999 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
RGPD4-201ENST00000408999 LCE2CQ5TA81 110 aa1.71□□□□□ -2.14
RGPD4-201ENST00000408999 KRTAP23-1A1A580 65 aa1.7□□□□□ -2.14
RGPD4-201ENST00000408999 KRTAP9-6A8MVA2 160 aa1.69□□□□□ -2.14
RGPD4-201ENST00000408999 KRTAP10-12P60413 245 aa1.66□□□□□ -2.14
RGPD4-201ENST00000408999 SPRR5A0A1B0GTR4 108 aa1.63□□□□□ -2.15
RGPD4-201ENST00000408999 KRTAP4-1Q9BYQ7 146 aa1.63□□□□□ -2.15
RGPD4-201ENST00000408999 KRTAP9-2Q9BYQ4 174 aa1.62□□□□□ -2.15
RGPD4-201ENST00000408999 LCE3AQ5TA76 89 aa1.61□□□□□ -2.15
RGPD4-201ENST00000408999 MT1HP80294 61 aa1.61□□□□□ -2.15
RGPD4-201ENST00000408999 CRCT1Q9UGL9 99 aa1.6□□□□□ -2.15
RGPD4-201ENST00000408999 LOC100996750A0A140TA64 210 aa1.59□□□□□ -2.15
RGPD4-201ENST00000408999 KRTAP4-6Q9BYQ5 205 aa1.59□□□□□ -2.15
RGPD4-201ENST00000408999 KRTAP12-3P60328 96 aa1.59□□□□□ -2.16
RGPD4-201ENST00000408999 INE1O15225 51 aa1.56□□□□□ -2.16
RGPD4-201ENST00000408999 KRTAP19-4Q3LI73 84 aa1.56□□□□□ -2.16
RGPD4-201ENST00000408999 MT2AP02795 61 aa1.55□□□□□ -2.16
RGPD4-201ENST00000408999 KRTAP8-1Q8IUC2 63 aa1.54□□□□□ -2.16
RGPD4-201ENST00000408999 MT1FP04733 61 aa1.53□□□□□ -2.16
RGPD4-201ENST00000408999 SPRR2GQ9BYE4 73 aa1.53□□□□□ -2.17
RGPD4-201ENST00000408999 KRTAP9-7A8MTY7 169 aa1.5□□□□□ -2.17
RGPD4-201ENST00000408999 KRTAP9-8Q9BYQ0 159 aa1.49□□□□□ -2.17
RGPD4-201ENST00000408999 KRTAP19-5Q3LI72 72 aa1.46□□□□□ -2.17
RGPD4-201ENST00000408999 KRTAP4-7Q9BYR0 210 aa1.44□□□□□ -2.18
RGPD4-201ENST00000408999 SPRR2FQ96RM1 72 aa1.44□□□□□ -2.18
RGPD4-201ENST00000408999 KRTAP10-5P60370 271 aa1.44□□□□□ -2.18
RGPD4-201ENST00000408999 KRTAP19-8Q3LI54 63 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms