RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 SPTSSBQ8NFR3 76 aa5.27□□□□□ -1.57
DDX39B-202ENST00000396172 C7orf65Q6ZTY9 151 aa5.26□□□□□ -1.57
DDX39B-202ENST00000396172 LRP2P98164 4655 aa5.24□□□□□ -1.57
DDX39B-202ENST00000396172 RBM12B-AS1Q9P1G2 102 aa5.23□□□□□ -1.57
DDX39B-202ENST00000396172 ACYP2P14621 99 aa5.23□□□□□ -1.57
DDX39B-202ENST00000396172 Q5W150 140 aa5.22□□□□□ -1.57
DDX39B-202ENST00000396172 SPINK7P58062 85 aa5.2□□□□□ -1.58
DDX39B-202ENST00000396172 DMAC1Q96GE9 116 aa5.19□□□□□ -1.58
DDX39B-202ENST00000396172 MUC17Q685J3 4493 aa5.18□□□□□ -1.58
DDX39B-202ENST00000396172 IGKV2D-30A0A075B6S6 120 aa5.15□□□□□ -1.59
DDX39B-202ENST00000396172 IGKV2-30P06310 120 aa5.15□□□□□ -1.59
DDX39B-202ENST00000396172 KRTAP3-3Q9BYR6 98 aa5.13□□□□□ -1.59
DDX39B-202ENST00000396172 KRTAP3-2Q9BYR7 98 aa5.13□□□□□ -1.59
DDX39B-202ENST00000396172 SPATA8Q6RVD6 105 aa5.12□□□□□ -1.59
DDX39B-202ENST00000396172 KRTAP4-1Q9BYQ7 146 aa5.1□□□□□ -1.59
DDX39B-202ENST00000396172 A0A1B0GU69 56 aa5.09□□□□□ -1.59
DDX39B-202ENST00000396172 UBR4Q5T4S7 5183 aa5.09□□□□□ -1.59
DDX39B-202ENST00000396172 H3BS24 57 aa5.07□□□□□ -1.6
DDX39B-202ENST00000396172 UQCR11O14957 56 aa5.06□□□□□ -1.6
DDX39B-202ENST00000396172 MIR22HGQ0VDD5 57 aa5.04□□□□□ -1.6
DDX39B-202ENST00000396172 RNF213Q63HN8 5207 aa5.03□□□□□ -1.6
DDX39B-202ENST00000396172 COX6B2Q6YFQ2 88 aa5.03□□□□□ -1.6
DDX39B-202ENST00000396172 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
DDX39B-202ENST00000396172 ADM2Q7Z4H4 148 aa4.97□□□□□ -1.61
DDX39B-202ENST00000396172 MUC2Q02817 5179 aa4.97□□□□□ -1.61
DDX39B-202ENST00000396172 LINC01554Q52M75 96 aa4.97□□□□□ -1.61
DDX39B-202ENST00000396172 KRTAP19-2Q3LHN2 52 aa4.95□□□□□ -1.62
DDX39B-202ENST00000396172 H1FX-AS1Q4G0G2 97 aa4.94□□□□□ -1.62
DDX39B-202ENST00000396172 LCE2CQ5TA81 110 aa4.91□□□□□ -1.62
DDX39B-202ENST00000396172 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
DDX39B-202ENST00000396172 S4R3F8 94 aa4.88□□□□□ -1.63
DDX39B-202ENST00000396172 FLGP20930 4061 aaPredicted RBP4.88□□□□□ -1.63
DDX39B-202ENST00000396172 MT1HP80294 61 aa4.85□□□□□ -1.63
DDX39B-202ENST00000396172 M0R2T5 61 aa4.85□□□□□ -1.63
DDX39B-202ENST00000396172 CSAG1Q6PB30 78 aa4.84□□□□□ -1.63
DDX39B-202ENST00000396172 FAT4Q6V0I7 4981 aa4.82□□□□□ -1.64
DDX39B-202ENST00000396172 H0YAA0 97 aa4.81□□□□□ -1.64
DDX39B-202ENST00000396172 LCE2AQ5TA79 106 aaPredicted RBP4.81□□□□□ -1.64
DDX39B-202ENST00000396172 A0A1B0GU33 70 aa4.78□□□□□ -1.64
DDX39B-202ENST00000396172 KRTAP25-1Q3LHN0 102 aa4.77□□□□□ -1.65
DDX39B-202ENST00000396172 K7ERS5 55 aa4.73□□□□□ -1.65
DDX39B-202ENST00000396172 KRTAP10-6P60371 365 aaPredicted RBP4.72□□□□□ -1.65
DDX39B-202ENST00000396172 LORP23490 312 aaPredicted RBP4.69□□□□□ -1.66
DDX39B-202ENST00000396172 ROMO1P60602 79 aa4.65□□□□□ -1.67
DDX39B-202ENST00000396172 KRTAP9-8Q9BYQ0 159 aa4.63□□□□□ -1.67
DDX39B-202ENST00000396172 MT2AP02795 61 aa4.61□□□□□ -1.67
DDX39B-202ENST00000396172 KRTAP10-10P60014 251 aa4.6□□□□□ -1.67
DDX39B-202ENST00000396172 MT1FP04733 61 aa4.57□□□□□ -1.68
DDX39B-202ENST00000396172 CRIPTQ9P021 101 aa4.57□□□□□ -1.68
DDX39B-202ENST00000396172 KRTAP13-4Q3LI77 160 aa4.56□□□□□ -1.68
DDX39B-202ENST00000396172 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
DDX39B-202ENST00000396172 P0C880 135 aa4.51□□□□□ -1.69
DDX39B-202ENST00000396172 R4GN34 69 aa4.49□□□□□ -1.69
DDX39B-202ENST00000396172 A0A0D9SG42 100 aa4.49□□□□□ -1.69
DDX39B-202ENST00000396172 KRTAP9-3Q9BYQ3 159 aa4.48□□□□□ -1.69
DDX39B-202ENST00000396172 LCE2BO14633 110 aa4.47□□□□□ -1.69
DDX39B-202ENST00000396172 M0QZ58 72 aa4.46□□□□□ -1.69
DDX39B-202ENST00000396172 SPRR2GQ9BYE4 73 aa4.46□□□□□ -1.7
DDX39B-202ENST00000396172 KRTAP19-1Q8IUB9 90 aa4.42□□□□□ -1.7
DDX39B-202ENST00000396172 SPINT4Q6UDR6 99 aa4.41□□□□□ -1.7
DDX39B-202ENST00000396172 KRTAP12-2P59991 146 aa4.4□□□□□ -1.7
DDX39B-202ENST00000396172 C10orf95Q9H7T3 257 aa4.4□□□□□ -1.7
DDX39B-202ENST00000396172 KRTAP15-1Q3LI76 137 aa4.38□□□□□ -1.71
DDX39B-202ENST00000396172 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
DDX39B-202ENST00000396172 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
DDX39B-202ENST00000396172 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
DDX39B-202ENST00000396172 PLAC4Q8WY50 150 aa4.31□□□□□ -1.72
DDX39B-202ENST00000396172 MT1BP07438 61 aa4.28□□□□□ -1.72
DDX39B-202ENST00000396172 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
DDX39B-202ENST00000396172 USH2AO75445 5202 aa4.24□□□□□ -1.73
DDX39B-202ENST00000396172 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
DDX39B-202ENST00000396172 PRO2289Q9P1D8 64 aa4.2□□□□□ -1.74
DDX39B-202ENST00000396172 CRCT1Q9UGL9 99 aa4.2□□□□□ -1.74
DDX39B-202ENST00000396172 CAMK2N1Q7Z7J9 78 aa4.19□□□□□ -1.74
DDX39B-202ENST00000396172 SSPOA2VEC9 5147 aa4.15□□□□□ -1.75
DDX39B-202ENST00000396172 KRTAP10-5P60370 271 aa4.15□□□□□ -1.75
DDX39B-202ENST00000396172 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
DDX39B-202ENST00000396172 KRTAP9-6A0A140TA67 174 aa4.12□□□□□ -1.75
DDX39B-202ENST00000396172 MT1XP80297 61 aa4.11□□□□□ -1.75
DDX39B-202ENST00000396172 FSIP2Q5CZC0 6907 aa4.1□□□□□ -1.75
DDX39B-202ENST00000396172 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
DDX39B-202ENST00000396172 LUZP6Q538Z0 58 aa4.03□□□□□ -1.76
DDX39B-202ENST00000396172 FCGBPQ9Y6R7 5405 aaPredicted RBP4□□□□□ -1.77
DDX39B-202ENST00000396172 TNP1P09430 55 aa3.95□□□□□ -1.78
DDX39B-202ENST00000396172 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
DDX39B-202ENST00000396172 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
DDX39B-202ENST00000396172 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.89□□□□□ -1.79
DDX39B-202ENST00000396172 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
DDX39B-202ENST00000396172 LOC100996750A0A140TA64 210 aa3.86□□□□□ -1.79
DDX39B-202ENST00000396172 KRTAP4-6Q9BYQ5 205 aa3.86□□□□□ -1.79
DDX39B-202ENST00000396172 KRTAP8-1Q8IUC2 63 aa3.82□□□□□ -1.8
DDX39B-202ENST00000396172 KRTAP4-8A0A0G2JLE6 195 aa3.78□□□□□ -1.8
DDX39B-202ENST00000396172 KRTAP4-8Q9BYQ9 185 aa3.78□□□□□ -1.8
DDX39B-202ENST00000396172 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
DDX39B-202ENST00000396172 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
DDX39B-202ENST00000396172 KRTAP6-3Q3LI67 103 aa3.76□□□□□ -1.81
DDX39B-202ENST00000396172 KRTAP9-7A8MTY7 169 aa3.74□□□□□ -1.81
DDX39B-202ENST00000396172 KRTAP5-9P26371 169 aa3.74□□□□□ -1.81
DDX39B-202ENST00000396172 KMT2DO14686 5537 aa3.72□□□□□ -1.81
DDX39B-202ENST00000396172 SPRR2FQ96RM1 72 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms