RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 LINC00643Q86TS7 51 aa7.81□□□□□ -1.16
SNRPA1-202ENST00000394082 LCA10Q71F78 164 aa7.8□□□□□ -1.16
SNRPA1-202ENST00000394082 C1orf64Q8NEQ6 169 aa7.8□□□□□ -1.16
SNRPA1-202ENST00000394082 J3QR89 54 aa7.78□□□□□ -1.16
SNRPA1-202ENST00000394082 KLKP1Q107X0 134 aa7.77□□□□□ -1.17
SNRPA1-202ENST00000394082 KRTAP5-9P26371 169 aa7.76□□□□□ -1.17
SNRPA1-202ENST00000394082 TRAV22A0A0B4J277 110 aa7.72□□□□□ -1.17
SNRPA1-202ENST00000394082 KRTAP20-1Q3LI63 56 aa7.72□□□□□ -1.17
SNRPA1-202ENST00000394082 A0A087WVE0 104 aa7.7□□□□□ -1.18
SNRPA1-202ENST00000394082 CRIPTQ9P021 101 aa7.7□□□□□ -1.18
SNRPA1-202ENST00000394082 UQCRQO14949 82 aa7.69□□□□□ -1.18
SNRPA1-202ENST00000394082 LOC101927531A0A1B0GV80 90 aa7.68□□□□□ -1.18
SNRPA1-202ENST00000394082 KMT2DO14686 5537 aa7.66□□□□□ -1.18
SNRPA1-202ENST00000394082 CYP4F30PQ9H0H9 118 aa7.66□□□□□ -1.18
SNRPA1-202ENST00000394082 ATOX1O00244 68 aa7.65□□□□□ -1.18
SNRPA1-202ENST00000394082 MDN1Q9NU22 5596 aa7.63□□□□□ -1.19
SNRPA1-202ENST00000394082 H0Y9P7 68 aa7.63□□□□□ -1.19
SNRPA1-202ENST00000394082 IMUPQ9GZP8 106 aa7.57□□□□□ -1.2
SNRPA1-202ENST00000394082 MP68P56378 58 aa7.55□□□□□ -1.2
SNRPA1-202ENST00000394082 K7ERU9 68 aa7.54□□□□□ -1.2
SNRPA1-202ENST00000394082 OCR1Q9BZK8 76 aa7.54□□□□□ -1.2
SNRPA1-202ENST00000394082 H0YAA0 97 aa7.53□□□□□ -1.2
SNRPA1-202ENST00000394082 SCGB1A1P11684 91 aa7.53□□□□□ -1.2
SNRPA1-202ENST00000394082 LINC00208Q96KT6 92 aa7.52□□□□□ -1.21
SNRPA1-202ENST00000394082 KRTAP2-3P0C7H8 128 aa7.48□□□□□ -1.21
SNRPA1-202ENST00000394082 KRTAP2-4Q9BYR9 128 aa7.48□□□□□ -1.21
SNRPA1-202ENST00000394082 NDUFC1O43677 76 aa7.45□□□□□ -1.22
SNRPA1-202ENST00000394082 H3BPC8 53 aa7.44□□□□□ -1.22
SNRPA1-202ENST00000394082 PRO2289Q9P1D8 64 aa7.43□□□□□ -1.22
SNRPA1-202ENST00000394082 A8MUN3 132 aa7.42□□□□□ -1.22
SNRPA1-202ENST00000394082 MT-ATP8P03928 68 aa7.42□□□□□ -1.22
SNRPA1-202ENST00000394082 SPRR2FQ96RM1 72 aa7.39□□□□□ -1.23
SNRPA1-202ENST00000394082 MT1XP80297 61 aa7.35□□□□□ -1.23
SNRPA1-202ENST00000394082 SMIM20Q8N5G0 67 aa7.35□□□□□ -1.23
SNRPA1-202ENST00000394082 SPRR2EP22531 72 aa7.34□□□□□ -1.23
SNRPA1-202ENST00000394082 SPRR2BP35325 72 aa7.34□□□□□ -1.23
SNRPA1-202ENST00000394082 SPRR2AP35326 72 aa7.34□□□□□ -1.23
SNRPA1-202ENST00000394082 ADM2Q7Z4H4 148 aa7.34□□□□□ -1.23
SNRPA1-202ENST00000394082 TRAV7A0A075B6U4 112 aa7.3□□□□□ -1.24
SNRPA1-202ENST00000394082 KRTAP12-2P59991 146 aa7.3□□□□□ -1.24
SNRPA1-202ENST00000394082 PLAC4Q8WY50 150 aa7.29□□□□□ -1.24
SNRPA1-202ENST00000394082 KRTAP8-1Q8IUC2 63 aa7.28□□□□□ -1.24
SNRPA1-202ENST00000394082 LCE1AQ5T7P2 110 aa7.25□□□□□ -1.25
SNRPA1-202ENST00000394082 DMAC1Q96GE9 116 aa7.25□□□□□ -1.25
SNRPA1-202ENST00000394082 KRTAP2-2Q9BYT5 123 aa7.23□□□□□ -1.25
SNRPA1-202ENST00000394082 KRTAP2-1Q9BYU5 128 aa7.23□□□□□ -1.25
SNRPA1-202ENST00000394082 R4GN34 69 aa7.2□□□□□ -1.26
SNRPA1-202ENST00000394082 C20orf197Q8N268 126 aa7.19□□□□□ -1.26
SNRPA1-202ENST00000394082 SNURFQ9Y675 71 aa7.14□□□□□ -1.27
SNRPA1-202ENST00000394082 P0C880 135 aa7.13□□□□□ -1.27
SNRPA1-202ENST00000394082 ACYP2P14621 99 aa7.13□□□□□ -1.27
SNRPA1-202ENST00000394082 SERP2Q8N6R1 65 aa7.13□□□□□ -1.27
SNRPA1-202ENST00000394082 M0QZ58 72 aa7.1□□□□□ -1.27
SNRPA1-202ENST00000394082 SPRR2DP22532 72 aa7.1□□□□□ -1.27
SNRPA1-202ENST00000394082 KRTAP4-8A0A0G2JLE6 195 aa7.09□□□□□ -1.27
SNRPA1-202ENST00000394082 KRTAP4-8Q9BYQ9 185 aa7.09□□□□□ -1.27
SNRPA1-202ENST00000394082 SPTSSBQ8NFR3 76 aa7.06□□□□□ -1.28
SNRPA1-202ENST00000394082 CHKB-CPT1BH3BT56 60 aa7.05□□□□□ -1.28
SNRPA1-202ENST00000394082 SPANXA2-OT1Q8N9U9 137 aa7.02□□□□□ -1.29
SNRPA1-202ENST00000394082 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
SNRPA1-202ENST00000394082 KRTAP10-7P60409 375 aaPredicted RBP6.98□□□□□ -1.29
SNRPA1-202ENST00000394082 LINC01554Q52M75 96 aa6.97□□□□□ -1.29
SNRPA1-202ENST00000394082 LCE3BQ5TA77 95 aa6.95□□□□□ -1.3
SNRPA1-202ENST00000394082 COX7CP15954 63 aa6.94□□□□□ -1.3
SNRPA1-202ENST00000394082 COA5Q86WW8 74 aa6.82□□□□□ -1.32
SNRPA1-202ENST00000394082 ANAPC13Q9BS18 74 aa6.82□□□□□ -1.32
SNRPA1-202ENST00000394082 LOC100996750A0A140TA64 210 aa6.81□□□□□ -1.32
SNRPA1-202ENST00000394082 KRTAP4-6Q9BYQ5 205 aa6.81□□□□□ -1.32
SNRPA1-202ENST00000394082 H7BZZ5 65 aa6.79□□□□□ -1.32
SNRPA1-202ENST00000394082 CYSTM1Q9H1C7 97 aa6.75□□□□□ -1.33
SNRPA1-202ENST00000394082 SEC61GP60059 68 aa6.7□□□□□ -1.34
SNRPA1-202ENST00000394082 DSTQ03001 7570 aaKnown RBP6.7□□□□□ -1.34
SNRPA1-202ENST00000394082 SERP1Q9Y6X1 66 aa6.66□□□□□ -1.34
SNRPA1-202ENST00000394082 LCE5AQ5TCM9 118 aa6.64□□□□□ -1.35
SNRPA1-202ENST00000394082 CCDC179H3BU77 68 aa6.63□□□□□ -1.35
SNRPA1-202ENST00000394082 GPR98Q8WXG9 6306 aa6.62□□□□□ -1.35
SNRPA1-202ENST00000394082 KRTAP19-7Q3SYF9 63 aa6.59□□□□□ -1.35
SNRPA1-202ENST00000394082 KRTAP13-4Q3LI77 160 aa6.58□□□□□ -1.36
SNRPA1-202ENST00000394082 ATP5EP56381 51 aaPredicted RBP6.56□□□□□ -1.36
SNRPA1-202ENST00000394082 KRTAP19-3Q7Z4W3 81 aa6.56□□□□□ -1.36
SNRPA1-202ENST00000394082 CAMK2N1Q7Z7J9 78 aa6.55□□□□□ -1.36
SNRPA1-202ENST00000394082 MT1EP04732 61 aa6.54□□□□□ -1.36
SNRPA1-202ENST00000394082 A0A1B0GU33 70 aa6.51□□□□□ -1.37
SNRPA1-202ENST00000394082 A0A1B0GU69 56 aa6.5□□□□□ -1.37
SNRPA1-202ENST00000394082 KRTAP4-9Q9BYQ8 210 aa6.49□□□□□ -1.37
SNRPA1-202ENST00000394082 A0A0D9SG42 100 aa6.47□□□□□ -1.37
SNRPA1-202ENST00000394082 SPATA8Q6RVD6 105 aa6.45□□□□□ -1.38
SNRPA1-202ENST00000394082 TMEM258P61165 79 aa6.43□□□□□ -1.38
SNRPA1-202ENST00000394082 MT1GP13640 62 aa6.4□□□□□ -1.38
SNRPA1-202ENST00000394082 PRR15LQ9BU68 103 aa6.38□□□□□ -1.39
SNRPA1-202ENST00000394082 SPINT4Q6UDR6 99 aa6.37□□□□□ -1.39
SNRPA1-202ENST00000394082 LCE1DQ5T752 114 aa6.36□□□□□ -1.39
SNRPA1-202ENST00000394082 SMIM26A0A096LP01 95 aa6.35□□□□□ -1.39
SNRPA1-202ENST00000394082 PP632Q6XCG6 107 aa6.35□□□□□ -1.39
SNRPA1-202ENST00000394082 LCE4AQ5TA78 99 aa6.33□□□□□ -1.4
SNRPA1-202ENST00000394082 KRTAP19-5Q3LI72 72 aa6.31□□□□□ -1.4
SNRPA1-202ENST00000394082 KRTAP12-1P59990 96 aa6.29□□□□□ -1.4
SNRPA1-202ENST00000394082 LINC01558Q9Y6Z2 57 aa6.29□□□□□ -1.4
SNRPA1-202ENST00000394082 HMCN1Q96RW7 5635 aa6.28□□□□□ -1.4
SNRPA1-202ENST00000394082 A8MU10 97 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms