RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 KTN1-AS1Q86SY8 53 aa9.99□□□□□ -0.81
RAB5C-202ENST00000393860 Q1T7F1 81 aa9.98□□□□□ -0.81
RAB5C-202ENST00000393860 MUC17Q685J3 4493 aa9.95□□□□□ -0.82
RAB5C-202ENST00000393860 PSPHP1O15172 72 aa9.92□□□□□ -0.82
RAB5C-202ENST00000393860 H3BS24 57 aa9.9□□□□□ -0.82
RAB5C-202ENST00000393860 PRR15LQ9BU68 103 aa9.88□□□□□ -0.83
RAB5C-202ENST00000393860 LINC01558Q9Y6Z2 57 aa9.86□□□□□ -0.83
RAB5C-202ENST00000393860 H1FX-AS1Q4G0G2 97 aa9.83□□□□□ -0.84
RAB5C-202ENST00000393860 LCA10Q71F78 164 aa9.83□□□□□ -0.84
RAB5C-202ENST00000393860 S4R3F8 94 aa9.82□□□□□ -0.84
RAB5C-202ENST00000393860 SPTSSBQ8NFR3 76 aa9.8□□□□□ -0.84
RAB5C-202ENST00000393860 Q5VV11 94 aa9.78□□□□□ -0.84
RAB5C-202ENST00000393860 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
RAB5C-202ENST00000393860 A0A1B0GU69 56 aa9.72□□□□□ -0.85
RAB5C-202ENST00000393860 MUC2Q02817 5179 aa9.69□□□□□ -0.86
RAB5C-202ENST00000393860 A6NN06 94 aa9.68□□□□□ -0.86
RAB5C-202ENST00000393860 KRTAP19-2Q3LHN2 52 aa9.67□□□□□ -0.86
RAB5C-202ENST00000393860 A6NED7 52 aa9.57□□□□□ -0.88
RAB5C-202ENST00000393860 UBR4Q5T4S7 5183 aa9.55□□□□□ -0.88
RAB5C-202ENST00000393860 A8MU10 97 aa9.54□□□□□ -0.88
RAB5C-202ENST00000393860 CSAG1Q6PB30 78 aa9.54□□□□□ -0.88
RAB5C-202ENST00000393860 RNF213Q63HN8 5207 aa9.51□□□□□ -0.89
RAB5C-202ENST00000393860 LCE2DQ5TA82 110 aaPredicted RBP9.5□□□□□ -0.89
RAB5C-202ENST00000393860 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
RAB5C-202ENST00000393860 KRTAP10-6P60371 365 aaPredicted RBP9.44□□□□□ -0.9
RAB5C-202ENST00000393860 LCE2CQ5TA81 110 aa9.43□□□□□ -0.9
RAB5C-202ENST00000393860 ADM2Q7Z4H4 148 aa9.43□□□□□ -0.9
RAB5C-202ENST00000393860 CDC42SE1Q9NRR8 79 aa9.43□□□□□ -0.9
RAB5C-202ENST00000393860 UQCR11O14957 56 aa9.41□□□□□ -0.9
RAB5C-202ENST00000393860 P0C880 135 aa9.41□□□□□ -0.9
RAB5C-202ENST00000393860 A0A1B0GU33 70 aa9.4□□□□□ -0.9
RAB5C-202ENST00000393860 LINC01554Q52M75 96 aa9.39□□□□□ -0.91
RAB5C-202ENST00000393860 FLGP20930 4061 aaPredicted RBP9.39□□□□□ -0.91
RAB5C-202ENST00000393860 MIR22HGQ0VDD5 57 aa9.35□□□□□ -0.91
RAB5C-202ENST00000393860 SPATA8Q6RVD6 105 aa9.32□□□□□ -0.92
RAB5C-202ENST00000393860 H0YAA0 97 aa9.31□□□□□ -0.92
RAB5C-202ENST00000393860 FAT4Q6V0I7 4981 aa9.3□□□□□ -0.92
RAB5C-202ENST00000393860 KRTAP13-4Q3LI77 160 aa9.25□□□□□ -0.93
RAB5C-202ENST00000393860 MT1HP80294 61 aa9.23□□□□□ -0.93
RAB5C-202ENST00000393860 M0R2T5 61 aa9.19□□□□□ -0.94
RAB5C-202ENST00000393860 LORP23490 312 aaPredicted RBP9.15□□□□□ -0.94
RAB5C-202ENST00000393860 A0A0D9SG42 100 aa9.12□□□□□ -0.95
RAB5C-202ENST00000393860 PRAC1Q96KF2 57 aa9.11□□□□□ -0.95
RAB5C-202ENST00000393860 M0QZ58 72 aa9.07□□□□□ -0.96
RAB5C-202ENST00000393860 R4GN34 69 aa9.04□□□□□ -0.96
RAB5C-202ENST00000393860 A0A0A0MQY5 61 aa8.93□□□□□ -0.98
RAB5C-202ENST00000393860 MT2AP02795 61 aa8.9□□□□□ -0.99
RAB5C-202ENST00000393860 KRTAP9-8Q9BYQ0 159 aa8.89□□□□□ -0.99
RAB5C-202ENST00000393860 KRTAP12-2P59991 146 aa8.88□□□□□ -0.99
RAB5C-202ENST00000393860 MT1FP04733 61 aa8.87□□□□□ -0.99
RAB5C-202ENST00000393860 SPINT4Q6UDR6 99 aa8.87□□□□□ -0.99
RAB5C-202ENST00000393860 KRTAP12-1P59990 96 aa8.86□□□□□ -0.99
RAB5C-202ENST00000393860 K7ERS5 55 aa8.84□□□□□ -0.99
RAB5C-202ENST00000393860 KRTAP10-10P60014 251 aa8.84□□□□□ -1
RAB5C-202ENST00000393860 CRIPTQ9P021 101 aa8.82□□□□□ -1
RAB5C-202ENST00000393860 LCE2AQ5TA79 106 aaPredicted RBP8.76□□□□□ -1.01
RAB5C-202ENST00000393860 ROMO1P60602 79 aa8.75□□□□□ -1.01
RAB5C-202ENST00000393860 KRTAP19-1Q8IUB9 90 aa8.71□□□□□ -1.02
RAB5C-202ENST00000393860 SPRR2GQ9BYE4 73 aa8.69□□□□□ -1.02
RAB5C-202ENST00000393860 KRTAP9-3Q9BYQ3 159 aa8.56□□□□□ -1.04
RAB5C-202ENST00000393860 KRTAP25-1Q3LHN0 102 aa8.52□□□□□ -1.05
RAB5C-202ENST00000393860 CAMK2N1Q7Z7J9 78 aa8.5□□□□□ -1.05
RAB5C-202ENST00000393860 PLAC4Q8WY50 150 aa8.45□□□□□ -1.06
RAB5C-202ENST00000393860 KRTAP19-8Q3LI54 63 aa8.44□□□□□ -1.06
RAB5C-202ENST00000393860 MT1BP07438 61 aa8.39□□□□□ -1.07
RAB5C-202ENST00000393860 C10orf95Q9H7T3 257 aa8.39□□□□□ -1.07
RAB5C-202ENST00000393860 LCE2BO14633 110 aa8.35□□□□□ -1.07
RAB5C-202ENST00000393860 MT1XP80297 61 aa8.14□□□□□ -1.11
RAB5C-202ENST00000393860 KRTAP10-5P60370 271 aa8.13□□□□□ -1.11
RAB5C-202ENST00000393860 NDUFAF8A1L188 74 aa8.1□□□□□ -1.11
RAB5C-202ENST00000393860 USH2AO75445 5202 aa8.08□□□□□ -1.12
RAB5C-202ENST00000393860 TNP1P09430 55 aa8.05□□□□□ -1.12
RAB5C-202ENST00000393860 KRTAP15-1Q3LI76 137 aa8.05□□□□□ -1.12
RAB5C-202ENST00000393860 LUZP6Q538Z0 58 aa7.99□□□□□ -1.13
RAB5C-202ENST00000393860 PRO2289Q9P1D8 64 aa7.95□□□□□ -1.14
RAB5C-202ENST00000393860 KRTAP10-7P60409 375 aaPredicted RBP7.86□□□□□ -1.15
RAB5C-202ENST00000393860 SSPOA2VEC9 5147 aa7.83□□□□□ -1.16
RAB5C-202ENST00000393860 LCE3AQ5TA76 89 aa7.79□□□□□ -1.16
RAB5C-202ENST00000393860 PP632Q6XCG6 107 aa7.79□□□□□ -1.16
RAB5C-202ENST00000393860 FSIP2Q5CZC0 6907 aa7.77□□□□□ -1.17
RAB5C-202ENST00000393860 KRTAP10-12P60413 245 aa7.74□□□□□ -1.17
RAB5C-202ENST00000393860 KRTAP19-6Q3LI70 58 aa7.74□□□□□ -1.17
RAB5C-202ENST00000393860 KRTAP23-1A1A580 65 aa7.72□□□□□ -1.17
RAB5C-202ENST00000393860 KRTAP9-2Q9BYQ4 174 aa7.61□□□□□ -1.19
RAB5C-202ENST00000393860 KRTAP4-8A0A0G2JLE6 195 aa7.56□□□□□ -1.2
RAB5C-202ENST00000393860 KRTAP4-8Q9BYQ9 185 aa7.56□□□□□ -1.2
RAB5C-202ENST00000393860 KMT2DO14686 5537 aa7.53□□□□□ -1.2
RAB5C-202ENST00000393860 KRTAP8-1Q8IUC2 63 aa7.52□□□□□ -1.2
RAB5C-202ENST00000393860 LOC100996750A0A140TA64 210 aa7.48□□□□□ -1.21
RAB5C-202ENST00000393860 KRTAP4-6Q9BYQ5 205 aa7.48□□□□□ -1.21
RAB5C-202ENST00000393860 FCGBPQ9Y6R7 5405 aaPredicted RBP7.45□□□□□ -1.22
RAB5C-202ENST00000393860 KRTAP12-3P60328 96 aa7.42□□□□□ -1.22
RAB5C-202ENST00000393860 KRTAP19-5Q3LI72 72 aa7.4□□□□□ -1.22
RAB5C-202ENST00000393860 CRCT1Q9UGL9 99 aa7.34□□□□□ -1.23
RAB5C-202ENST00000393860 KRTAP19-7Q3SYF9 63 aa7.25□□□□□ -1.25
RAB5C-202ENST00000393860 MT1EP04732 61 aa7.12□□□□□ -1.27
RAB5C-202ENST00000393860 MACF1Q9UPN3 7388 aaKnown RBP7.08□□□□□ -1.28
RAB5C-202ENST00000393860 MT1LQ93083 61 aa6.99□□□□□ -1.29
RAB5C-202ENST00000393860 SPRR5A0A1B0GTR4 108 aa6.97□□□□□ -1.29
RAB5C-202ENST00000393860 SPRR2FQ96RM1 72 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms