RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 A0A087WVE0 104 aa7.36□□□□□ -1.23
SMN2-201ENST00000380741 KMT2DO14686 5537 aa7.35□□□□□ -1.23
SMN2-201ENST00000380741 KRTAP20-1Q3LI63 56 aa7.35□□□□□ -1.23
SMN2-201ENST00000380741 COL5A1-AS1Q5SY13 56 aa7.35□□□□□ -1.23
SMN2-201ENST00000380741 CRIPTQ9P021 101 aa7.34□□□□□ -1.23
SMN2-201ENST00000380741 IMUPQ9GZP8 106 aa7.33□□□□□ -1.24
SMN2-201ENST00000380741 MDN1Q9NU22 5596 aa7.31□□□□□ -1.24
SMN2-201ENST00000380741 TRAV22A0A0B4J277 110 aa7.28□□□□□ -1.24
SMN2-201ENST00000380741 LOC101927531A0A1B0GV80 90 aa7.27□□□□□ -1.25
SMN2-201ENST00000380741 ETDBQ3ZM63 59 aa7.25□□□□□ -1.25
SMN2-201ENST00000380741 LCE3BQ5TA77 95 aa7.24□□□□□ -1.25
SMN2-201ENST00000380741 GTF2H5Q6ZYL4 71 aa7.23□□□□□ -1.25
SMN2-201ENST00000380741 F8W1H4 67 aa7.22□□□□□ -1.25
SMN2-201ENST00000380741 H0YAA0 97 aa7.2□□□□□ -1.26
SMN2-201ENST00000380741 NDUFC1O43677 76 aa7.2□□□□□ -1.26
SMN2-201ENST00000380741 H0Y9P7 68 aa7.14□□□□□ -1.27
SMN2-201ENST00000380741 ADM2Q7Z4H4 148 aa7.14□□□□□ -1.27
SMN2-201ENST00000380741 ATOX1O00244 68 aa7.13□□□□□ -1.27
SMN2-201ENST00000380741 UQCRQO14949 82 aa7.13□□□□□ -1.27
SMN2-201ENST00000380741 A8MUN3 132 aa7.12□□□□□ -1.27
SMN2-201ENST00000380741 SPRR2FQ96RM1 72 aa7.12□□□□□ -1.27
SMN2-201ENST00000380741 ACYP1P07311 99 aa7.1□□□□□ -1.27
SMN2-201ENST00000380741 HIST1H4AP62805 103 aaKnown RBP7.1□□□□□ -1.27
SMN2-201ENST00000380741 MT1XP80297 61 aa7.1□□□□□ -1.27
SMN2-201ENST00000380741 PRO2289Q9P1D8 64 aa7.1□□□□□ -1.27
SMN2-201ENST00000380741 KRTAP2-3P0C7H8 128 aa7.09□□□□□ -1.27
SMN2-201ENST00000380741 ATP5EP2Q5VTU8 51 aa7.09□□□□□ -1.27
SMN2-201ENST00000380741 KRTAP2-4Q9BYR9 128 aa7.09□□□□□ -1.27
SMN2-201ENST00000380741 SPRR2EP22531 72 aa7.05□□□□□ -1.28
SMN2-201ENST00000380741 SPRR2BP35325 72 aa7.05□□□□□ -1.28
SMN2-201ENST00000380741 SPRR2AP35326 72 aa7.05□□□□□ -1.28
SMN2-201ENST00000380741 KRTAP9-9Q9BYP9 154 aa7.05□□□□□ -1.28
SMN2-201ENST00000380741 KRTAP9-4Q9BYQ2 154 aa7.05□□□□□ -1.28
SMN2-201ENST00000380741 FAM240AA0A1B0GVK7 77 aa7.04□□□□□ -1.28
SMN2-201ENST00000380741 PLAC4Q8WY50 150 aa7.03□□□□□ -1.28
SMN2-201ENST00000380741 LINC00208Q96KT6 92 aa7.01□□□□□ -1.29
SMN2-201ENST00000380741 KRTAP8-1Q8IUC2 63 aa7□□□□□ -1.29
SMN2-201ENST00000380741 PCP4L1A6NKN8 68 aa6.98□□□□□ -1.29
SMN2-201ENST00000380741 R4GN34 69 aa6.97□□□□□ -1.29
SMN2-201ENST00000380741 P0C880 135 aa6.95□□□□□ -1.3
SMN2-201ENST00000380741 KRTAP12-2P59991 146 aa6.95□□□□□ -1.3
SMN2-201ENST00000380741 LCE1AQ5T7P2 110 aa6.94□□□□□ -1.3
SMN2-201ENST00000380741 LCE4AQ5TA78 99 aa6.93□□□□□ -1.3
SMN2-201ENST00000380741 MP68P56378 58 aa6.92□□□□□ -1.3
SMN2-201ENST00000380741 M0QZ58 72 aa6.91□□□□□ -1.3
SMN2-201ENST00000380741 OCR1Q9BZK8 76 aa6.91□□□□□ -1.3
SMN2-201ENST00000380741 LINC00643Q86TS7 51 aa6.9□□□□□ -1.3
SMN2-201ENST00000380741 C20orf197Q8N268 126 aa6.9□□□□□ -1.3
SMN2-201ENST00000380741 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
SMN2-201ENST00000380741 KRTAP2-2Q9BYT5 123 aa6.85□□□□□ -1.31
SMN2-201ENST00000380741 KRTAP2-1Q9BYU5 128 aa6.85□□□□□ -1.31
SMN2-201ENST00000380741 SPRR2DP22532 72 aa6.83□□□□□ -1.32
SMN2-201ENST00000380741 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
SMN2-201ENST00000380741 DMAC1Q96GE9 116 aa6.82□□□□□ -1.32
SMN2-201ENST00000380741 LCE1DQ5T752 114 aa6.81□□□□□ -1.32
SMN2-201ENST00000380741 H3BPC8 53 aa6.77□□□□□ -1.33
SMN2-201ENST00000380741 KRTAP10-7P60409 375 aaPredicted RBP6.77□□□□□ -1.33
SMN2-201ENST00000380741 KRTAP10-12P60413 245 aa6.73□□□□□ -1.33
SMN2-201ENST00000380741 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
SMN2-201ENST00000380741 TRAV7A0A075B6U4 112 aa6.65□□□□□ -1.34
SMN2-201ENST00000380741 SCGB1A1P11684 91 aa6.65□□□□□ -1.34
SMN2-201ENST00000380741 MT-ATP8P03928 68 aa6.63□□□□□ -1.35
SMN2-201ENST00000380741 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
SMN2-201ENST00000380741 ACYP2P14621 99 aa6.59□□□□□ -1.35
SMN2-201ENST00000380741 A0A1B0GV90 55 aa6.58□□□□□ -1.36
SMN2-201ENST00000380741 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
SMN2-201ENST00000380741 SPTSSBQ8NFR3 76 aa6.55□□□□□ -1.36
SMN2-201ENST00000380741 KRTAP4-9Q9BYQ8 210 aa6.55□□□□□ -1.36
SMN2-201ENST00000380741 J3QR89 54 aa6.53□□□□□ -1.36
SMN2-201ENST00000380741 CHKB-CPT1BH3BT56 60 aa6.47□□□□□ -1.37
SMN2-201ENST00000380741 KRTAP13-4Q3LI77 160 aa6.41□□□□□ -1.38
SMN2-201ENST00000380741 SMIM20Q8N5G0 67 aa6.39□□□□□ -1.39
SMN2-201ENST00000380741 KRTAP4-11Q9BYQ6 195 aa6.38□□□□□ -1.39
SMN2-201ENST00000380741 CAMK2N1Q7Z7J9 78 aa6.37□□□□□ -1.39
SMN2-201ENST00000380741 DSTQ03001 7570 aaKnown RBP6.35□□□□□ -1.39
SMN2-201ENST00000380741 KRTAP19-7Q3SYF9 63 aa6.35□□□□□ -1.39
SMN2-201ENST00000380741 SNURFQ9Y675 71 aa6.35□□□□□ -1.39
SMN2-201ENST00000380741 GPR98Q8WXG9 6306 aa6.32□□□□□ -1.4
SMN2-201ENST00000380741 MT1EP04732 61 aa6.31□□□□□ -1.4
SMN2-201ENST00000380741 KRTAP4-2Q9BYR5 136 aa6.31□□□□□ -1.4
SMN2-201ENST00000380741 KRTAP19-3Q7Z4W3 81 aa6.29□□□□□ -1.4
SMN2-201ENST00000380741 SPANXA2-OT1Q8N9U9 137 aa6.27□□□□□ -1.41
SMN2-201ENST00000380741 A0A0D9SG42 100 aa6.18□□□□□ -1.42
SMN2-201ENST00000380741 K7ERU9 68 aa6.17□□□□□ -1.42
SMN2-201ENST00000380741 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
SMN2-201ENST00000380741 CYSTM1Q9H1C7 97 aa6.16□□□□□ -1.42
SMN2-201ENST00000380741 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
SMN2-201ENST00000380741 COA5Q86WW8 74 aa6.13□□□□□ -1.43
SMN2-201ENST00000380741 SPATA8Q6RVD6 105 aa6.11□□□□□ -1.43
SMN2-201ENST00000380741 SERP2Q8N6R1 65 aa6.11□□□□□ -1.43
SMN2-201ENST00000380741 MT1GP13640 62 aa6.1□□□□□ -1.43
SMN2-201ENST00000380741 SERP1Q9Y6X1 66 aa6.1□□□□□ -1.43
SMN2-201ENST00000380741 SEC61GP60059 68 aa6.09□□□□□ -1.43
SMN2-201ENST00000380741 SPINT4Q6UDR6 99 aa6.09□□□□□ -1.43
SMN2-201ENST00000380741 PP632Q6XCG6 107 aa6.05□□□□□ -1.44
SMN2-201ENST00000380741 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
SMN2-201ENST00000380741 A0A1B0GU33 70 aa6.03□□□□□ -1.44
SMN2-201ENST00000380741 MT1MQ8N339 61 aa6.02□□□□□ -1.45
SMN2-201ENST00000380741 HMCN1Q96RW7 5635 aa6.01□□□□□ -1.45
SMN2-201ENST00000380741 MT4P47944 62 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms