RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 LINC00643Q86TS7 51 aa9.42□□□□□ -0.9
SMNDC1-201ENST00000369592 CSAG1Q6PB30 78 aa9.41□□□□□ -0.9
SMNDC1-201ENST00000369592 NEBP20929 6669 aa9.41□□□□□ -0.9
SMNDC1-201ENST00000369592 UQCRQO14949 82 aa9.4□□□□□ -0.9
SMNDC1-201ENST00000369592 KRTAP4-8A0A0G2JLE6 195 aa9.39□□□□□ -0.91
SMNDC1-201ENST00000369592 A0A087WVE0 104 aa9.37□□□□□ -0.91
SMNDC1-201ENST00000369592 H0Y9P7 68 aa9.32□□□□□ -0.92
SMNDC1-201ENST00000369592 ATOX1O00244 68 aa9.32□□□□□ -0.92
SMNDC1-201ENST00000369592 SPRR2GQ9BYE4 73 aa9.29□□□□□ -0.92
SMNDC1-201ENST00000369592 FAM236AA0A1B0GUQ0 79 aa9.27□□□□□ -0.93
SMNDC1-201ENST00000369592 FAM236BA0A1B0GV22 79 aa9.27□□□□□ -0.93
SMNDC1-201ENST00000369592 OCR1Q9BZK8 76 aa9.26□□□□□ -0.93
SMNDC1-201ENST00000369592 MT1BP07438 61 aa9.24□□□□□ -0.93
SMNDC1-201ENST00000369592 KRTAP19-8Q3LI54 63 aa9.24□□□□□ -0.93
SMNDC1-201ENST00000369592 KRTAP20-1Q3LI63 56 aa9.24□□□□□ -0.93
SMNDC1-201ENST00000369592 MUC12Q9UKN1 5478 aa9.23□□□□□ -0.93
SMNDC1-201ENST00000369592 KLKP1Q107X0 134 aa9.21□□□□□ -0.94
SMNDC1-201ENST00000369592 LINC00208Q96KT6 92 aa9.18□□□□□ -0.94
SMNDC1-201ENST00000369592 A8MUN3 132 aa9.15□□□□□ -0.94
SMNDC1-201ENST00000369592 J3QR89 54 aa9.14□□□□□ -0.95
SMNDC1-201ENST00000369592 Q5VV11 94 aa9.12□□□□□ -0.95
SMNDC1-201ENST00000369592 H0YAA0 97 aa9.11□□□□□ -0.95
SMNDC1-201ENST00000369592 MP68P56378 58 aa9.11□□□□□ -0.95
SMNDC1-201ENST00000369592 IMUPQ9GZP8 106 aa9.1□□□□□ -0.95
SMNDC1-201ENST00000369592 NDUFC1O43677 76 aa9.09□□□□□ -0.95
SMNDC1-201ENST00000369592 CRIPTQ9P021 101 aa9.09□□□□□ -0.95
SMNDC1-201ENST00000369592 KRTAP4-7Q9BYR0 210 aa9.06□□□□□ -0.96
SMNDC1-201ENST00000369592 H3BPC8 53 aa9.05□□□□□ -0.96
SMNDC1-201ENST00000369592 LCE1DQ5T752 114 aa9.05□□□□□ -0.96
SMNDC1-201ENST00000369592 A6NN06 94 aa8.99□□□□□ -0.97
SMNDC1-201ENST00000369592 KRTAP10-5P60370 271 aa8.99□□□□□ -0.97
SMNDC1-201ENST00000369592 DMAC1Q96GE9 116 aa8.94□□□□□ -0.98
SMNDC1-201ENST00000369592 SCGB1A1P11684 91 aa8.93□□□□□ -0.98
SMNDC1-201ENST00000369592 ADM2Q7Z4H4 148 aa8.92□□□□□ -0.98
SMNDC1-201ENST00000369592 MT-ATP8P03928 68 aa8.9□□□□□ -0.98
SMNDC1-201ENST00000369592 MDN1Q9NU22 5596 aa8.86□□□□□ -0.99
SMNDC1-201ENST00000369592 K7ERU9 68 aa8.84□□□□□ -0.99
SMNDC1-201ENST00000369592 KRTAP4-9Q9BYQ8 210 aa8.83□□□□□ -1
SMNDC1-201ENST00000369592 KMT2DO14686 5537 aa8.81□□□□□ -1
SMNDC1-201ENST00000369592 TRAV7A0A075B6U4 112 aa8.8□□□□□ -1
SMNDC1-201ENST00000369592 P0C880 135 aa8.79□□□□□ -1
SMNDC1-201ENST00000369592 SMIM20Q8N5G0 67 aa8.77□□□□□ -1.01
SMNDC1-201ENST00000369592 KRTAP5-9P26371 169 aa8.76□□□□□ -1.01
SMNDC1-201ENST00000369592 KRTAP2-3P0C7H8 128 aa8.74□□□□□ -1.01
SMNDC1-201ENST00000369592 KRTAP2-4Q9BYR9 128 aa8.74□□□□□ -1.01
SMNDC1-201ENST00000369592 KRTAP4-2Q9BYR5 136 aa8.7□□□□□ -1.02
SMNDC1-201ENST00000369592 C20orf197Q8N268 126 aa8.69□□□□□ -1.02
SMNDC1-201ENST00000369592 LCE4AQ5TA78 99 aa8.68□□□□□ -1.02
SMNDC1-201ENST00000369592 ACYP2P14621 99 aa8.67□□□□□ -1.02
SMNDC1-201ENST00000369592 MT1XP80297 61 aa8.66□□□□□ -1.02
SMNDC1-201ENST00000369592 R4GN34 69 aa8.66□□□□□ -1.02
SMNDC1-201ENST00000369592 M0QZ58 72 aa8.61□□□□□ -1.03
SMNDC1-201ENST00000369592 PLAC4Q8WY50 150 aa8.58□□□□□ -1.04
SMNDC1-201ENST00000369592 SNURFQ9Y675 71 aa8.58□□□□□ -1.04
SMNDC1-201ENST00000369592 PRO2289Q9P1D8 64 aa8.57□□□□□ -1.04
SMNDC1-201ENST00000369592 SPANXA2-OT1Q8N9U9 137 aa8.52□□□□□ -1.05
SMNDC1-201ENST00000369592 SERP2Q8N6R1 65 aa8.51□□□□□ -1.05
SMNDC1-201ENST00000369592 SPTSSBQ8NFR3 76 aa8.51□□□□□ -1.05
SMNDC1-201ENST00000369592 KRTAP4-11Q9BYQ6 195 aa8.49□□□□□ -1.05
SMNDC1-201ENST00000369592 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
SMNDC1-201ENST00000369592 CHKB-CPT1BH3BT56 60 aa8.43□□□□□ -1.06
SMNDC1-201ENST00000369592 SPRR2EP22531 72 aa8.43□□□□□ -1.06
SMNDC1-201ENST00000369592 SPRR2BP35325 72 aa8.43□□□□□ -1.06
SMNDC1-201ENST00000369592 SPRR2AP35326 72 aa8.43□□□□□ -1.06
SMNDC1-201ENST00000369592 LINC01554Q52M75 96 aa8.43□□□□□ -1.06
SMNDC1-201ENST00000369592 KRTAP2-2Q9BYT5 123 aa8.42□□□□□ -1.06
SMNDC1-201ENST00000369592 KRTAP2-1Q9BYU5 128 aa8.42□□□□□ -1.06
SMNDC1-201ENST00000369592 SPRR2FQ96RM1 72 aa8.36□□□□□ -1.07
SMNDC1-201ENST00000369592 GPR98Q8WXG9 6306 aa8.29□□□□□ -1.08
SMNDC1-201ENST00000369592 KRTAP8-1Q8IUC2 63 aa8.27□□□□□ -1.09
SMNDC1-201ENST00000369592 COX7CP15954 63 aa8.26□□□□□ -1.09
SMNDC1-201ENST00000369592 KRTAP13-4Q3LI77 160 aa8.26□□□□□ -1.09
SMNDC1-201ENST00000369592 KRTAP10-7P60409 375 aaPredicted RBP8.24□□□□□ -1.09
SMNDC1-201ENST00000369592 KRTAP10-12P60413 245 aa8.24□□□□□ -1.09
SMNDC1-201ENST00000369592 COA5Q86WW8 74 aa8.24□□□□□ -1.09
SMNDC1-201ENST00000369592 LCE5AQ5TCM9 118 aa8.23□□□□□ -1.09
SMNDC1-201ENST00000369592 KRTAP19-4Q3LI73 84 aa8.19□□□□□ -1.1
SMNDC1-201ENST00000369592 LCE1AQ5T7P2 110 aa8.18□□□□□ -1.1
SMNDC1-201ENST00000369592 CYSTM1Q9H1C7 97 aa8.18□□□□□ -1.1
SMNDC1-201ENST00000369592 H7BZZ5 65 aa8.16□□□□□ -1.1
SMNDC1-201ENST00000369592 SPRR2DP22532 72 aa8.15□□□□□ -1.1
SMNDC1-201ENST00000369592 SEC61GP60059 68 aa7.98□□□□□ -1.13
SMNDC1-201ENST00000369592 SERP1Q9Y6X1 66 aa7.98□□□□□ -1.13
SMNDC1-201ENST00000369592 CAMK2N1Q7Z7J9 78 aa7.94□□□□□ -1.14
SMNDC1-201ENST00000369592 A0A1B0GU33 70 aa7.93□□□□□ -1.14
SMNDC1-201ENST00000369592 SPATA8Q6RVD6 105 aa7.92□□□□□ -1.14
SMNDC1-201ENST00000369592 ANAPC13Q9BS18 74 aa7.91□□□□□ -1.14
SMNDC1-201ENST00000369592 A0A0D9SG42 100 aa7.88□□□□□ -1.15
SMNDC1-201ENST00000369592 KRTAP5-3Q6L8H2 238 aa7.84□□□□□ -1.15
SMNDC1-201ENST00000369592 CCDC179H3BU77 68 aa7.83□□□□□ -1.16
SMNDC1-201ENST00000369592 KRTAP12-1P59990 96 aa7.83□□□□□ -1.16
SMNDC1-201ENST00000369592 H3BS24 57 aa7.77□□□□□ -1.17
SMNDC1-201ENST00000369592 DSTQ03001 7570 aaKnown RBP7.77□□□□□ -1.17
SMNDC1-201ENST00000369592 A0A1B0GU69 56 aa7.76□□□□□ -1.17
SMNDC1-201ENST00000369592 KRTAP19-7Q3SYF9 63 aa7.76□□□□□ -1.17
SMNDC1-201ENST00000369592 SPINT4Q6UDR6 99 aa7.75□□□□□ -1.17
SMNDC1-201ENST00000369592 ATP5EP56381 51 aaPredicted RBP7.69□□□□□ -1.18
SMNDC1-201ENST00000369592 SMIM26A0A096LP01 95 aa7.67□□□□□ -1.18
SMNDC1-201ENST00000369592 MT1EP04732 61 aa7.67□□□□□ -1.18
SMNDC1-201ENST00000369592 A8MU10 97 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms