RNA–Protein interactions for RNA: ENST00000369518.1

SYCP1-201, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYCP1, Length 3,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-201ENST00000369518 UBR4Q5T4S7 5183 aa3.26□□□□□ -1.89
SYCP1-201ENST00000369518 IGKV2-24A0A0C4DH68 120 aa3.26□□□□□ -1.89
SYCP1-201ENST00000369518 RPS29P62273 56 aaKnown RBP3.26□□□□□ -1.89
SYCP1-201ENST00000369518 R4GN34 69 aa3.25□□□□□ -1.89
SYCP1-201ENST00000369518 KRTAP9-6A0A140TA67 174 aa3.25□□□□□ -1.89
SYCP1-201ENST00000369518 C10orf95Q9H7T3 257 aa3.25□□□□□ -1.89
SYCP1-201ENST00000369518 Q8IZM0 81 aa3.24□□□□□ -1.89
SYCP1-201ENST00000369518 SPRR4Q96PI1 79 aa3.24□□□□□ -1.89
SYCP1-201ENST00000369518 K7EQZ3 153 aa3.24□□□□□ -1.89
SYCP1-201ENST00000369518 KRTAP13-1Q8IUC0 172 aa3.23□□□□□ -1.89
SYCP1-201ENST00000369518 SPATA8Q6RVD6 105 aa3.23□□□□□ -1.89
SYCP1-201ENST00000369518 C6orf48Q9UBA6 75 aa3.23□□□□□ -1.89
SYCP1-201ENST00000369518 HRES1P13985 223 aa3.23□□□□□ -1.89
SYCP1-201ENST00000369518 KRTAP7-1Q8IUC3 87 aa3.21□□□□□ -1.9
SYCP1-201ENST00000369518 LRP2P98164 4655 aa3.19□□□□□ -1.9
SYCP1-201ENST00000369518 COX17Q14061 63 aa3.19□□□□□ -1.9
SYCP1-201ENST00000369518 FAT4Q6V0I7 4981 aa3.18□□□□□ -1.9
SYCP1-201ENST00000369518 LOC110117498A0A087WWA1 95 aa3.18□□□□□ -1.9
SYCP1-201ENST00000369518 SPANXA2-OT1Q8N9U9 137 aa3.18□□□□□ -1.9
SYCP1-201ENST00000369518 UNQ6190/PRO20217Q6UXQ8 127 aa3.17□□□□□ -1.9
SYCP1-201ENST00000369518 KRTAP11-1Q8IUC1 163 aa3.17□□□□□ -1.9
SYCP1-201ENST00000369518 LCE2BO14633 110 aa3.16□□□□□ -1.9
SYCP1-201ENST00000369518 KCNQ1DNQ9H478 68 aa3.16□□□□□ -1.9
SYCP1-201ENST00000369518 SPINK1P00995 79 aa3.14□□□□□ -1.91
SYCP1-201ENST00000369518 KRTAP13-2Q52LG2 175 aa3.14□□□□□ -1.91
SYCP1-201ENST00000369518 KRTAP13-3Q3SY46 172 aa3.13□□□□□ -1.91
SYCP1-201ENST00000369518 Q6ZRX8 168 aa3.13□□□□□ -1.91
SYCP1-201ENST00000369518 A0A087WSZ3 146 aa3.13□□□□□ -1.91
SYCP1-201ENST00000369518 IGLV6-57P01721 117 aa3.13□□□□□ -1.91
SYCP1-201ENST00000369518 SPRR1AP35321 89 aa3.12□□□□□ -1.91
SYCP1-201ENST00000369518 DSCR10P59022 87 aa3.11□□□□□ -1.91
SYCP1-201ENST00000369518 A0A1B0GU33 70 aa3.11□□□□□ -1.91
SYCP1-201ENST00000369518 CRCT1Q9UGL9 99 aa3.09□□□□□ -1.91
SYCP1-201ENST00000369518 LPAP08519 4548 aa3.09□□□□□ -1.91
SYCP1-201ENST00000369518 SPRR1BP22528 89 aa3.06□□□□□ -1.92
SYCP1-201ENST00000369518 IGFL1Q6UW32 110 aa3.05□□□□□ -1.92
SYCP1-201ENST00000369518 PRLHP81277 87 aa3.03□□□□□ -1.92
SYCP1-201ENST00000369518 KRTAP19-2Q3LHN2 52 aa3.03□□□□□ -1.92
SYCP1-201ENST00000369518 LORP23490 312 aaPredicted RBP3.01□□□□□ -1.93
SYCP1-201ENST00000369518 MT1HP80294 61 aa3□□□□□ -1.93
SYCP1-201ENST00000369518 KRTAP4-1Q9BYQ7 146 aa2.99□□□□□ -1.93
SYCP1-201ENST00000369518 H0YAA0 97 aa2.99□□□□□ -1.93
SYCP1-201ENST00000369518 KRTAP10-6P60371 365 aaPredicted RBP2.99□□□□□ -1.93
SYCP1-201ENST00000369518 PRO2289Q9P1D8 64 aa2.99□□□□□ -1.93
SYCP1-201ENST00000369518 KRTAP3-1Q9BYR8 98 aa2.97□□□□□ -1.93
SYCP1-201ENST00000369518 RPL37P61927 97 aaKnown RBP2.96□□□□□ -1.93
SYCP1-201ENST00000369518 ANAPC11Q9NYG5 84 aa2.96□□□□□ -1.93
SYCP1-201ENST00000369518 A0A0D9SG42 100 aa2.96□□□□□ -1.94
SYCP1-201ENST00000369518 IGLV5-48A0A075B6I7 105 aa2.93□□□□□ -1.94
SYCP1-201ENST00000369518 LOC100996750A0A140TA64 210 aa2.9□□□□□ -1.95
SYCP1-201ENST00000369518 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.95
SYCP1-201ENST00000369518 FLGP20930 4061 aaPredicted RBP2.89□□□□□ -1.95
SYCP1-201ENST00000369518 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.89□□□□□ -1.95
SYCP1-201ENST00000369518 PLAC4Q8WY50 150 aa2.89□□□□□ -1.95
SYCP1-201ENST00000369518 MRPL34Q9BQ48 92 aaKnown RBP2.88□□□□□ -1.95
SYCP1-201ENST00000369518 KRTAP9-7A8MTY7 169 aa2.88□□□□□ -1.95
SYCP1-201ENST00000369518 MUC2Q02817 5179 aa2.86□□□□□ -1.95
SYCP1-201ENST00000369518 IGKV2-30P06310 120 aa2.84□□□□□ -1.96
SYCP1-201ENST00000369518 IGKV2D-30A0A075B6S6 120 aa2.83□□□□□ -1.96
SYCP1-201ENST00000369518 KRTAP9-8Q9BYQ0 159 aa2.83□□□□□ -1.96
SYCP1-201ENST00000369518 H1FX-AS1Q4G0G2 97 aa2.83□□□□□ -1.96
SYCP1-201ENST00000369518 COX6B2Q6YFQ2 88 aa2.83□□□□□ -1.96
SYCP1-201ENST00000369518 MMP24-AS1A0A0U1RRL7 71 aa2.83□□□□□ -1.96
SYCP1-201ENST00000369518 M0R2T5 61 aa2.81□□□□□ -1.96
SYCP1-201ENST00000369518 C9orf92A6NGG3 77 aa2.79□□□□□ -1.96
SYCP1-201ENST00000369518 KRTAP19-6Q3LI70 58 aa2.79□□□□□ -1.96
SYCP1-201ENST00000369518 TP53AIP1Q9HCN2 124 aa2.77□□□□□ -1.97
SYCP1-201ENST00000369518 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
SYCP1-201ENST00000369518 KRTAP9-3Q9BYQ3 159 aa2.77□□□□□ -1.97
SYCP1-201ENST00000369518 MT2AP02795 61 aa2.76□□□□□ -1.97
SYCP1-201ENST00000369518 SSPOA2VEC9 5147 aa2.75□□□□□ -1.97
SYCP1-201ENST00000369518 KRTAP19-1Q8IUB9 90 aa2.75□□□□□ -1.97
SYCP1-201ENST00000369518 MT1FP04733 61 aa2.7□□□□□ -1.98
SYCP1-201ENST00000369518 USH2AO75445 5202 aa2.67□□□□□ -1.98
SYCP1-201ENST00000369518 KRTAP10-10P60014 251 aa2.65□□□□□ -1.98
SYCP1-201ENST00000369518 FCGBPQ9Y6R7 5405 aaPredicted RBP2.63□□□□□ -1.99
SYCP1-201ENST00000369518 INE1O15225 51 aa2.62□□□□□ -1.99
SYCP1-201ENST00000369518 S4R3F8 94 aa2.61□□□□□ -1.99
SYCP1-201ENST00000369518 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
SYCP1-201ENST00000369518 KRTAP5-9P26371 169 aa2.59□□□□□ -1.99
SYCP1-201ENST00000369518 KRTAP13-4Q3LI77 160 aa2.59□□□□□ -1.99
SYCP1-201ENST00000369518 PP632Q6XCG6 107 aa2.59□□□□□ -1.99
SYCP1-201ENST00000369518 KRTAP12-2P59991 146 aa2.58□□□□□ -2
SYCP1-201ENST00000369518 KRTAP19-8Q3LI54 63 aa2.58□□□□□ -2
SYCP1-201ENST00000369518 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
SYCP1-201ENST00000369518 KRTAP12-1P59990 96 aa2.57□□□□□ -2
SYCP1-201ENST00000369518 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
SYCP1-201ENST00000369518 NEBP20929 6669 aa2.55□□□□□ -2
SYCP1-201ENST00000369518 SPRR2GQ9BYE4 73 aa2.54□□□□□ -2
SYCP1-201ENST00000369518 KRTAP10-5P60370 271 aa2.53□□□□□ -2
SYCP1-201ENST00000369518 KRTAP2-3P0C7H8 128 aa2.51□□□□□ -2.01
SYCP1-201ENST00000369518 KRTAP2-4Q9BYR9 128 aa2.51□□□□□ -2.01
SYCP1-201ENST00000369518 FSIP2Q5CZC0 6907 aa2.51□□□□□ -2.01
SYCP1-201ENST00000369518 MT1BP07438 61 aa2.49□□□□□ -2.01
SYCP1-201ENST00000369518 MACF1Q9UPN3 7388 aaKnown RBP2.48□□□□□ -2.01
SYCP1-201ENST00000369518 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
SYCP1-201ENST00000369518 LCE3CQ5T5A8 94 aa2.45□□□□□ -2.02
SYCP1-201ENST00000369518 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
SYCP1-201ENST00000369518 LCE1AQ5T7P2 110 aa2.41□□□□□ -2.02
SYCP1-201ENST00000369518 KRTAP2-2Q9BYT5 123 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms