RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 KRTAP19-2Q3LHN2 52 aa5.5□□□□□ -1.53
BRCC3-204ENST00000369462 FAT4Q6V0I7 4981 aa5.5□□□□□ -1.53
BRCC3-204ENST00000369462 KRTAP3-1Q9BYR8 98 aa5.49□□□□□ -1.53
BRCC3-204ENST00000369462 SPANXA2-OT1Q8N9U9 137 aa5.45□□□□□ -1.54
BRCC3-204ENST00000369462 SMIM26A0A096LP01 95 aa5.45□□□□□ -1.54
BRCC3-204ENST00000369462 H1FX-AS1Q4G0G2 97 aa5.44□□□□□ -1.54
BRCC3-204ENST00000369462 DMAC1Q96GE9 116 aa5.43□□□□□ -1.54
BRCC3-204ENST00000369462 A8MUN3 132 aa5.42□□□□□ -1.54
BRCC3-204ENST00000369462 FLGP20930 4061 aaPredicted RBP5.42□□□□□ -1.54
BRCC3-204ENST00000369462 ACYP2P14621 99 aa5.38□□□□□ -1.55
BRCC3-204ENST00000369462 PRO0628Q9UI54 55 aa5.38□□□□□ -1.55
BRCC3-204ENST00000369462 TMEM258P61165 79 aa5.37□□□□□ -1.55
BRCC3-204ENST00000369462 MT1HP80294 61 aa5.36□□□□□ -1.55
BRCC3-204ENST00000369462 S4R3F8 94 aa5.36□□□□□ -1.55
BRCC3-204ENST00000369462 LCA10Q71F78 164 aa5.35□□□□□ -1.55
BRCC3-204ENST00000369462 M0R2T5 61 aa5.33□□□□□ -1.56
BRCC3-204ENST00000369462 ATP5EP56381 51 aaPredicted RBP5.33□□□□□ -1.56
BRCC3-204ENST00000369462 RPS28P62857 69 aaKnown RBP5.33□□□□□ -1.56
BRCC3-204ENST00000369462 CHKB-CPT1BH3BT56 60 aa5.3□□□□□ -1.56
BRCC3-204ENST00000369462 COA5Q86WW8 74 aa5.3□□□□□ -1.56
BRCC3-204ENST00000369462 PMAIP1Q13794 54 aa5.28□□□□□ -1.56
BRCC3-204ENST00000369462 CSAG1Q6PB30 78 aa5.27□□□□□ -1.57
BRCC3-204ENST00000369462 SPTSSBQ8NFR3 76 aa5.22□□□□□ -1.57
BRCC3-204ENST00000369462 SERP1Q9Y6X1 66 aa5.2□□□□□ -1.58
BRCC3-204ENST00000369462 KRTAP10-6P60371 365 aaPredicted RBP5.19□□□□□ -1.58
BRCC3-204ENST00000369462 KRTAP9-8Q9BYQ0 159 aa5.14□□□□□ -1.59
BRCC3-204ENST00000369462 PSPHP1O15172 72 aa5.11□□□□□ -1.59
BRCC3-204ENST00000369462 ADM2Q7Z4H4 148 aa5.11□□□□□ -1.59
BRCC3-204ENST00000369462 H0YAA0 97 aa5.1□□□□□ -1.59
BRCC3-204ENST00000369462 MT2AP02795 61 aa5.1□□□□□ -1.59
BRCC3-204ENST00000369462 KRTAP10-10P60014 251 aa5.08□□□□□ -1.6
BRCC3-204ENST00000369462 MT1FP04733 61 aa5.08□□□□□ -1.6
BRCC3-204ENST00000369462 P0C880 135 aa5.06□□□□□ -1.6
BRCC3-204ENST00000369462 A0A1B0GU69 56 aa5.03□□□□□ -1.6
BRCC3-204ENST00000369462 LINC01558Q9Y6Z2 57 aa5.02□□□□□ -1.61
BRCC3-204ENST00000369462 Q1T7F1 81 aa4.98□□□□□ -1.61
BRCC3-204ENST00000369462 PRR15LQ9BU68 103 aa4.97□□□□□ -1.61
BRCC3-204ENST00000369462 KRTAP9-3Q9BYQ3 159 aa4.96□□□□□ -1.62
BRCC3-204ENST00000369462 R4GN34 69 aa4.96□□□□□ -1.62
BRCC3-204ENST00000369462 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
BRCC3-204ENST00000369462 CRIPTQ9P021 101 aa4.95□□□□□ -1.62
BRCC3-204ENST00000369462 A0A1B0GU33 70 aa4.93□□□□□ -1.62
BRCC3-204ENST00000369462 M0QZ58 72 aa4.93□□□□□ -1.62
BRCC3-204ENST00000369462 KRTAP19-1Q8IUB9 90 aa4.92□□□□□ -1.62
BRCC3-204ENST00000369462 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
BRCC3-204ENST00000369462 LUZP6Q538Z0 58 aa4.9□□□□□ -1.63
BRCC3-204ENST00000369462 KRTAP13-4Q3LI77 160 aa4.89□□□□□ -1.63
BRCC3-204ENST00000369462 Q5VV11 94 aa4.87□□□□□ -1.63
BRCC3-204ENST00000369462 SPATA8Q6RVD6 105 aa4.87□□□□□ -1.63
BRCC3-204ENST00000369462 LINC01554Q52M75 96 aa4.87□□□□□ -1.63
BRCC3-204ENST00000369462 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
BRCC3-204ENST00000369462 KRTAP4-6Q9BYQ5 205 aa4.87□□□□□ -1.63
BRCC3-204ENST00000369462 A6NED7 52 aa4.85□□□□□ -1.63
BRCC3-204ENST00000369462 BRK1Q8WUW1 75 aa4.85□□□□□ -1.63
BRCC3-204ENST00000369462 UQCR11O14957 56 aa4.84□□□□□ -1.63
BRCC3-204ENST00000369462 USH2AO75445 5202 aa4.82□□□□□ -1.64
BRCC3-204ENST00000369462 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
BRCC3-204ENST00000369462 A0A0D9SG42 100 aa4.81□□□□□ -1.64
BRCC3-204ENST00000369462 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
BRCC3-204ENST00000369462 KRTAP9-2Q9BYQ4 174 aa4.79□□□□□ -1.64
BRCC3-204ENST00000369462 A8MU10 97 aa4.78□□□□□ -1.64
BRCC3-204ENST00000369462 KTN1-AS1Q86SY8 53 aa4.77□□□□□ -1.65
BRCC3-204ENST00000369462 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
BRCC3-204ENST00000369462 MT1BP07438 61 aa4.76□□□□□ -1.65
BRCC3-204ENST00000369462 A6NN06 94 aa4.72□□□□□ -1.65
BRCC3-204ENST00000369462 CAMK2N1Q7Z7J9 78 aa4.72□□□□□ -1.65
BRCC3-204ENST00000369462 PLAC4Q8WY50 150 aa4.72□□□□□ -1.65
BRCC3-204ENST00000369462 SPINT4Q6UDR6 99 aa4.7□□□□□ -1.66
BRCC3-204ENST00000369462 SSPOA2VEC9 5147 aa4.69□□□□□ -1.66
BRCC3-204ENST00000369462 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
BRCC3-204ENST00000369462 KRTAP12-2P59991 146 aa4.68□□□□□ -1.66
BRCC3-204ENST00000369462 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
BRCC3-204ENST00000369462 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.67
BRCC3-204ENST00000369462 K7ERS5 55 aa4.59□□□□□ -1.67
BRCC3-204ENST00000369462 KRTAP19-6Q3LI70 58 aa4.59□□□□□ -1.67
BRCC3-204ENST00000369462 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
BRCC3-204ENST00000369462 MT1XP80297 61 aa4.57□□□□□ -1.68
BRCC3-204ENST00000369462 KRTAP10-5P60370 271 aa4.55□□□□□ -1.68
BRCC3-204ENST00000369462 PRO2289Q9P1D8 64 aa4.54□□□□□ -1.68
BRCC3-204ENST00000369462 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
BRCC3-204ENST00000369462 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.68
BRCC3-204ENST00000369462 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
BRCC3-204ENST00000369462 KRTAP9-6A0A140TA67 174 aa4.48□□□□□ -1.69
BRCC3-204ENST00000369462 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.69
BRCC3-204ENST00000369462 C10orf95Q9H7T3 257 aa4.45□□□□□ -1.7
BRCC3-204ENST00000369462 LCE5AQ5TCM9 118 aa4.44□□□□□ -1.7
BRCC3-204ENST00000369462 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
BRCC3-204ENST00000369462 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
BRCC3-204ENST00000369462 KRTAP10-7P60409 375 aaPredicted RBP4.38□□□□□ -1.71
BRCC3-204ENST00000369462 KRTAP25-1Q3LHN0 102 aa4.37□□□□□ -1.71
BRCC3-204ENST00000369462 KRTAP4-8Q9BYQ9 185 aa4.37□□□□□ -1.71
BRCC3-204ENST00000369462 ROMO1P60602 79 aa4.36□□□□□ -1.71
BRCC3-204ENST00000369462 KMT2DO14686 5537 aa4.36□□□□□ -1.71
BRCC3-204ENST00000369462 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
BRCC3-204ENST00000369462 TNP1P09430 55 aa4.35□□□□□ -1.71
BRCC3-204ENST00000369462 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
BRCC3-204ENST00000369462 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
BRCC3-204ENST00000369462 KRTAP4-8A0A0G2JLE6 195 aa4.27□□□□□ -1.73
BRCC3-204ENST00000369462 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
BRCC3-204ENST00000369462 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms