RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 MMP24-AS1A0A0U1RRL7 71 aa4□□□□□ -1.77
YBX3-204ENST00000366290 ACYP1P07311 99 aa4□□□□□ -1.77
YBX3-204ENST00000366290 MT1HP80294 61 aa3.99□□□□□ -1.77
YBX3-204ENST00000366290 ATP11AUNQ6ZP68 121 aa3.98□□□□□ -1.77
YBX3-204ENST00000366290 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
YBX3-204ENST00000366290 TMEM254Q8TBM7 123 aa3.96□□□□□ -1.78
YBX3-204ENST00000366290 hDV103S1A0JD37 113 aa3.95□□□□□ -1.78
YBX3-204ENST00000366290 MRPL34Q9BQ48 92 aaKnown RBP3.95□□□□□ -1.78
YBX3-204ENST00000366290 WFDC13Q8IUB5 93 aa3.94□□□□□ -1.78
YBX3-204ENST00000366290 HCG22E2RYF7 251 aa3.93□□□□□ -1.78
YBX3-204ENST00000366290 J3QR89 54 aa3.93□□□□□ -1.78
YBX3-204ENST00000366290 LINC00643Q86TS7 51 aa3.93□□□□□ -1.78
YBX3-204ENST00000366290 ATP5EP2Q5VTU8 51 aa3.92□□□□□ -1.78
YBX3-204ENST00000366290 CASC2Q6XLA1 102 aa3.92□□□□□ -1.78
YBX3-204ENST00000366290 ZCCHC13Q8WW36 166 aaKnown RBP3.92□□□□□ -1.78
YBX3-204ENST00000366290 Q5W150 140 aa3.9□□□□□ -1.79
YBX3-204ENST00000366290 COX6B2Q6YFQ2 88 aa3.9□□□□□ -1.79
YBX3-204ENST00000366290 A0A087WVE0 104 aa3.88□□□□□ -1.79
YBX3-204ENST00000366290 K7ERU9 68 aa3.88□□□□□ -1.79
YBX3-204ENST00000366290 NDUFS5O43920 106 aa3.88□□□□□ -1.79
YBX3-204ENST00000366290 C5orf47Q569G3 176 aa3.88□□□□□ -1.79
YBX3-204ENST00000366290 HRES1P13985 223 aa3.87□□□□□ -1.79
YBX3-204ENST00000366290 HIST1H4AP62805 103 aaKnown RBP3.87□□□□□ -1.79
YBX3-204ENST00000366290 M0R2T5 61 aa3.85□□□□□ -1.79
YBX3-204ENST00000366290 SPINK7P58062 85 aa3.85□□□□□ -1.79
YBX3-204ENST00000366290 MT-ATP8P03928 68 aa3.84□□□□□ -1.79
YBX3-204ENST00000366290 TP53AIP1Q9HCN2 124 aa3.82□□□□□ -1.8
YBX3-204ENST00000366290 USH2AO75445 5202 aa3.81□□□□□ -1.8
YBX3-204ENST00000366290 IMUPQ9GZP8 106 aa3.8□□□□□ -1.8
YBX3-204ENST00000366290 SSPOA2VEC9 5147 aa3.8□□□□□ -1.8
YBX3-204ENST00000366290 C7orf65Q6ZTY9 151 aa3.79□□□□□ -1.8
YBX3-204ENST00000366290 RBM12B-AS1Q9P1G2 102 aa3.79□□□□□ -1.8
YBX3-204ENST00000366290 UQCRQO14949 82 aa3.78□□□□□ -1.8
YBX3-204ENST00000366290 SMIM26A0A096LP01 95 aa3.77□□□□□ -1.81
YBX3-204ENST00000366290 TRAV22A0A0B4J277 110 aa3.77□□□□□ -1.81
YBX3-204ENST00000366290 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
YBX3-204ENST00000366290 FCGBPQ9Y6R7 5405 aaPredicted RBP3.75□□□□□ -1.81
YBX3-204ENST00000366290 FAM236DA0A1B0GTK5 79 aa3.75□□□□□ -1.81
YBX3-204ENST00000366290 H0Y9P7 68 aa3.75□□□□□ -1.81
YBX3-204ENST00000366290 FAM236CP0DP71 79 aa3.75□□□□□ -1.81
YBX3-204ENST00000366290 CYP4F30PQ9H0H9 118 aa3.75□□□□□ -1.81
YBX3-204ENST00000366290 FAM236AA0A1B0GUQ0 79 aa3.74□□□□□ -1.81
YBX3-204ENST00000366290 FAM236BA0A1B0GV22 79 aa3.74□□□□□ -1.81
YBX3-204ENST00000366290 LOC101927531A0A1B0GV80 90 aa3.72□□□□□ -1.81
YBX3-204ENST00000366290 MT2AP02795 61 aa3.72□□□□□ -1.81
YBX3-204ENST00000366290 C4orf26Q17RF5 130 aa3.72□□□□□ -1.81
YBX3-204ENST00000366290 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
YBX3-204ENST00000366290 SPRR5A0A1B0GTR4 108 aa3.71□□□□□ -1.82
YBX3-204ENST00000366290 ATOX1O00244 68 aa3.71□□□□□ -1.82
YBX3-204ENST00000366290 SCGB1A1P11684 91 aa3.71□□□□□ -1.82
YBX3-204ENST00000366290 C1orf64Q8NEQ6 169 aa3.7□□□□□ -1.82
YBX3-204ENST00000366290 LINC00208Q96KT6 92 aa3.7□□□□□ -1.82
YBX3-204ENST00000366290 TRAV7A0A075B6U4 112 aa3.69□□□□□ -1.82
YBX3-204ENST00000366290 MT1FP04733 61 aa3.69□□□□□ -1.82
YBX3-204ENST00000366290 MP68P56378 58 aa3.68□□□□□ -1.82
YBX3-204ENST00000366290 KLKP1Q107X0 134 aa3.68□□□□□ -1.82
YBX3-204ENST00000366290 H1FX-AS1Q4G0G2 97 aa3.68□□□□□ -1.82
YBX3-204ENST00000366290 H3BPC8 53 aa3.67□□□□□ -1.82
YBX3-204ENST00000366290 SMIM20Q8N5G0 67 aa3.66□□□□□ -1.82
YBX3-204ENST00000366290 KRTAP10-10P60014 251 aa3.65□□□□□ -1.83
YBX3-204ENST00000366290 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
YBX3-204ENST00000366290 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.83
YBX3-204ENST00000366290 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
YBX3-204ENST00000366290 SERP2Q8N6R1 65 aa3.63□□□□□ -1.83
YBX3-204ENST00000366290 SPANXA2-OT1Q8N9U9 137 aa3.61□□□□□ -1.83
YBX3-204ENST00000366290 SNURFQ9Y675 71 aa3.61□□□□□ -1.83
YBX3-204ENST00000366290 LCA10Q71F78 164 aa3.6□□□□□ -1.83
YBX3-204ENST00000366290 S4R3F8 94 aa3.6□□□□□ -1.83
YBX3-204ENST00000366290 C20orf197Q8N268 126 aa3.59□□□□□ -1.83
YBX3-204ENST00000366290 A8MUN3 132 aa3.58□□□□□ -1.84
YBX3-204ENST00000366290 COX7CP15954 63 aa3.58□□□□□ -1.84
YBX3-204ENST00000366290 PSPHP1O15172 72 aa3.57□□□□□ -1.84
YBX3-204ENST00000366290 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
YBX3-204ENST00000366290 DMAC1Q96GE9 116 aa3.57□□□□□ -1.84
YBX3-204ENST00000366290 CYSTM1Q9H1C7 97 aa3.55□□□□□ -1.84
YBX3-204ENST00000366290 V9GYY9 64 aa3.55□□□□□ -1.84
YBX3-204ENST00000366290 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
YBX3-204ENST00000366290 CSAG1Q6PB30 78 aa3.53□□□□□ -1.84
YBX3-204ENST00000366290 ANAPC13Q9BS18 74 aa3.53□□□□□ -1.84
YBX3-204ENST00000366290 H7BZZ5 65 aa3.51□□□□□ -1.85
YBX3-204ENST00000366290 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
YBX3-204ENST00000366290 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
YBX3-204ENST00000366290 CCDC179H3BU77 68 aa3.5□□□□□ -1.85
YBX3-204ENST00000366290 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
YBX3-204ENST00000366290 NDUFC1O43677 76 aa3.49□□□□□ -1.85
YBX3-204ENST00000366290 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
YBX3-204ENST00000366290 ACYP2P14621 99 aa3.48□□□□□ -1.85
YBX3-204ENST00000366290 SPINT4Q6UDR6 99 aa3.47□□□□□ -1.85
YBX3-204ENST00000366290 H0YAA0 97 aa3.45□□□□□ -1.86
YBX3-204ENST00000366290 SPRR2GQ9BYE4 73 aa3.45□□□□□ -1.86
YBX3-204ENST00000366290 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
YBX3-204ENST00000366290 NEBP20929 6669 aa3.43□□□□□ -1.86
YBX3-204ENST00000366290 COA5Q86WW8 74 aa3.42□□□□□ -1.86
YBX3-204ENST00000366290 MT1BP07438 61 aa3.41□□□□□ -1.86
YBX3-204ENST00000366290 ADM2Q7Z4H4 148 aa3.41□□□□□ -1.86
YBX3-204ENST00000366290 CHKB-CPT1BH3BT56 60 aa3.4□□□□□ -1.87
YBX3-204ENST00000366290 P0C880 135 aa3.4□□□□□ -1.87
YBX3-204ENST00000366290 CRIPTQ9P021 101 aa3.4□□□□□ -1.87
YBX3-204ENST00000366290 MUC12Q9UKN1 5478 aa3.4□□□□□ -1.87
YBX3-204ENST00000366290 Q5VV11 94 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms