RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 KRTAP13-1Q8IUC0 172 aa0.86□□□□□ -2.27
RNU1-42P-201ENST00000364033 CDC42SE1Q9NRR8 79 aa0.86□□□□□ -2.27
RNU1-42P-201ENST00000364033 USH2AO75445 5202 aa0.85□□□□□ -2.27
RNU1-42P-201ENST00000364033 K7ERS5 55 aa0.85□□□□□ -2.27
RNU1-42P-201ENST00000364033 M0R2T5 61 aa0.85□□□□□ -2.27
RNU1-42P-201ENST00000364033 UQCR11O14957 56 aa0.85□□□□□ -2.27
RNU1-42P-201ENST00000364033 TPRXLQ17RH7 258 aa0.85□□□□□ -2.27
RNU1-42P-201ENST00000364033 KRTAP13-3Q3SY46 172 aa0.85□□□□□ -2.27
RNU1-42P-201ENST00000364033 LCE2CQ5TA81 110 aa0.85□□□□□ -2.27
RNU1-42P-201ENST00000364033 Q5VV11 94 aa0.85□□□□□ -2.27
RNU1-42P-201ENST00000364033 SPATA8Q6RVD6 105 aa0.85□□□□□ -2.27
RNU1-42P-201ENST00000364033 LCA10Q71F78 164 aa0.85□□□□□ -2.27
RNU1-42P-201ENST00000364033 Q96NJ1 140 aa0.85□□□□□ -2.27
RNU1-42P-201ENST00000364033 MUC17Q685J3 4493 aa0.85□□□□□ -2.27
RNU1-42P-201ENST00000364033 SEC61BP60468 96 aaKnown RBP0.84□□□□□ -2.27
RNU1-42P-201ENST00000364033 MT1HP80294 61 aa0.84□□□□□ -2.27
RNU1-42P-201ENST00000364033 MIR22HGQ0VDD5 57 aa0.84□□□□□ -2.27
RNU1-42P-201ENST00000364033 XP32Q5T750 250 aa0.84□□□□□ -2.27
RNU1-42P-201ENST00000364033 Q5W150 140 aa0.84□□□□□ -2.27
RNU1-42P-201ENST00000364033 SSPOA2VEC9 5147 aa0.84□□□□□ -2.28
RNU1-42P-201ENST00000364033 IGKV2D-30A0A075B6S6 120 aa0.83□□□□□ -2.28
RNU1-42P-201ENST00000364033 IGKV2-30P06310 120 aa0.83□□□□□ -2.28
RNU1-42P-201ENST00000364033 SPINK7P58062 85 aa0.83□□□□□ -2.28
RNU1-42P-201ENST00000364033 KRTAP10-6P60371 365 aaPredicted RBP0.83□□□□□ -2.28
RNU1-42P-201ENST00000364033 KRTAP19-2Q3LHN2 52 aa0.83□□□□□ -2.28
RNU1-42P-201ENST00000364033 KRTAP6-3Q3LI67 103 aa0.83□□□□□ -2.28
RNU1-42P-201ENST00000364033 C7orf65Q6ZTY9 151 aa0.83□□□□□ -2.28
RNU1-42P-201ENST00000364033 NOTCH2NLQ7Z3S9 236 aa0.83□□□□□ -2.28
RNU1-42P-201ENST00000364033 KTN1-AS1Q86SY8 53 aa0.83□□□□□ -2.28
RNU1-42P-201ENST00000364033 DMAC1Q96GE9 116 aa0.83□□□□□ -2.28
RNU1-42P-201ENST00000364033 A0A1B0GU33 70 aa0.82□□□□□ -2.28
RNU1-42P-201ENST00000364033 A6NN06 94 aa0.82□□□□□ -2.28
RNU1-42P-201ENST00000364033 KRTAP2-3P0C7H8 128 aa0.82□□□□□ -2.28
RNU1-42P-201ENST00000364033 LORP23490 312 aaPredicted RBP0.82□□□□□ -2.28
RNU1-42P-201ENST00000364033 RPS29P62273 56 aaKnown RBP0.82□□□□□ -2.28
RNU1-42P-201ENST00000364033 COX6B2Q6YFQ2 88 aa0.82□□□□□ -2.28
RNU1-42P-201ENST00000364033 KRTAP2-4Q9BYR9 128 aa0.82□□□□□ -2.28
RNU1-42P-201ENST00000364033 RBM12B-AS1Q9P1G2 102 aa0.82□□□□□ -2.28
RNU1-42P-201ENST00000364033 FCGBPQ9Y6R7 5405 aaPredicted RBP0.82□□□□□ -2.28
RNU1-42P-201ENST00000364033 SPRR5A0A1B0GTR4 108 aa0.81□□□□□ -2.28
RNU1-42P-201ENST00000364033 RPL37P61927 97 aaKnown RBP0.8□□□□□ -2.28
RNU1-42P-201ENST00000364033 LINC01554Q52M75 96 aa0.8□□□□□ -2.28
RNU1-42P-201ENST00000364033 GPR98Q8WXG9 6306 aa0.8□□□□□ -2.28
RNU1-42P-201ENST00000364033 A8MU10 97 aa0.79□□□□□ -2.28
RNU1-42P-201ENST00000364033 A8MUU9 505 aa0.79□□□□□ -2.28
RNU1-42P-201ENST00000364033 KRTAP16-1A8MUX0 517 aa0.79□□□□□ -2.28
RNU1-42P-201ENST00000364033 H1FX-AS1Q4G0G2 97 aa0.79□□□□□ -2.28
RNU1-42P-201ENST00000364033 KRTAP19-1Q8IUB9 90 aa0.79□□□□□ -2.28
RNU1-42P-201ENST00000364033 C20orf166-AS1Q96NR2 134 aa0.79□□□□□ -2.28
RNU1-42P-201ENST00000364033 KRTAP9-8Q9BYQ0 159 aa0.79□□□□□ -2.28
RNU1-42P-201ENST00000364033 CRIPTQ9P021 101 aa0.79□□□□□ -2.28
RNU1-42P-201ENST00000364033 NEBP20929 6669 aa0.79□□□□□ -2.28
RNU1-42P-201ENST00000364033 FLGP20930 4061 aaPredicted RBP0.79□□□□□ -2.28
RNU1-42P-201ENST00000364033 MACF1Q9UPN3 7388 aaKnown RBP0.78□□□□□ -2.28
RNU1-42P-201ENST00000364033 LCE2BO14633 110 aa0.78□□□□□ -2.28
RNU1-42P-201ENST00000364033 KRTAP10-10P60014 251 aa0.78□□□□□ -2.28
RNU1-42P-201ENST00000364033 CSAG1Q6PB30 78 aa0.78□□□□□ -2.28
RNU1-42P-201ENST00000364033 M0QZ58 72 aa0.77□□□□□ -2.29
RNU1-42P-201ENST00000364033 MT2AP02795 61 aa0.77□□□□□ -2.29
RNU1-42P-201ENST00000364033 MT1FP04733 61 aa0.77□□□□□ -2.29
RNU1-42P-201ENST00000364033 ROMO1P60602 79 aa0.77□□□□□ -2.29
RNU1-42P-201ENST00000364033 KRTAP2-2Q9BYT5 123 aa0.77□□□□□ -2.29
RNU1-42P-201ENST00000364033 KRTAP2-1Q9BYU5 128 aa0.77□□□□□ -2.29
RNU1-42P-201ENST00000364033 MUC12Q9UKN1 5478 aa0.77□□□□□ -2.29
RNU1-42P-201ENST00000364033 KRTAP25-1Q3LHN0 102 aa0.76□□□□□ -2.29
RNU1-42P-201ENST00000364033 PRAC1Q96KF2 57 aa0.76□□□□□ -2.29
RNU1-42P-201ENST00000364033 KRTAP9-3Q9BYQ3 159 aa0.76□□□□□ -2.29
RNU1-42P-201ENST00000364033 KRTAP3-1Q9BYR8 98 aa0.76□□□□□ -2.29
RNU1-42P-201ENST00000364033 A0A0D9SG42 100 aa0.75□□□□□ -2.29
RNU1-42P-201ENST00000364033 ADM2Q7Z4H4 148 aa0.75□□□□□ -2.29
RNU1-42P-201ENST00000364033 S4R3F8 94 aa0.75□□□□□ -2.29
RNU1-42P-201ENST00000364033 H0YAA0 97 aa0.74□□□□□ -2.29
RNU1-42P-201ENST00000364033 KRTAP5-7Q6L8G8 165 aa0.74□□□□□ -2.29
RNU1-42P-201ENST00000364033 SPINT4Q6UDR6 99 aa0.74□□□□□ -2.29
RNU1-42P-201ENST00000364033 KMT2DO14686 5537 aa0.73□□□□□ -2.29
RNU1-42P-201ENST00000364033 MDN1Q9NU22 5596 aa0.73□□□□□ -2.29
RNU1-42P-201ENST00000364033 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
RNU1-42P-201ENST00000364033 H3BS24 57 aa0.72□□□□□ -2.29
RNU1-42P-201ENST00000364033 KRTAP19-6Q3LI70 58 aa0.72□□□□□ -2.29
RNU1-42P-201ENST00000364033 KRTAP3-3Q9BYR6 98 aa0.72□□□□□ -2.29
RNU1-42P-201ENST00000364033 KRTAP3-2Q9BYR7 98 aa0.72□□□□□ -2.29
RNU1-42P-201ENST00000364033 R4GN34 69 aa0.72□□□□□ -2.29
RNU1-42P-201ENST00000364033 P0C880 135 aa0.71□□□□□ -2.3
RNU1-42P-201ENST00000364033 LUZP6Q538Z0 58 aa0.71□□□□□ -2.3
RNU1-42P-201ENST00000364033 PP632Q6XCG6 107 aa0.71□□□□□ -2.3
RNU1-42P-201ENST00000364033 CAMK2N1Q7Z7J9 78 aa0.7□□□□□ -2.3
RNU1-42P-201ENST00000364033 PLAC4Q8WY50 150 aa0.7□□□□□ -2.3
RNU1-42P-201ENST00000364033 MT1BP07438 61 aa0.69□□□□□ -2.3
RNU1-42P-201ENST00000364033 KRTAP12-1P59990 96 aa0.69□□□□□ -2.3
RNU1-42P-201ENST00000364033 KRTAP12-2P59991 146 aa0.69□□□□□ -2.3
RNU1-42P-201ENST00000364033 A0A0A0MQY5 61 aa0.68□□□□□ -2.3
RNU1-42P-201ENST00000364033 KRTAP23-1A1A580 65 aa0.68□□□□□ -2.3
RNU1-42P-201ENST00000364033 NDUFAF8A1L188 74 aa0.68□□□□□ -2.3
RNU1-42P-201ENST00000364033 TNP1P09430 55 aa0.68□□□□□ -2.3
RNU1-42P-201ENST00000364033 KRTAP15-1Q3LI76 137 aa0.68□□□□□ -2.3
RNU1-42P-201ENST00000364033 KRTAP13-4Q3LI77 160 aa0.68□□□□□ -2.3
RNU1-42P-201ENST00000364033 KRTAP4-9Q9BYQ8 210 aa0.68□□□□□ -2.3
RNU1-42P-201ENST00000364033 SPRR2EP22531 72 aa0.67□□□□□ -2.3
RNU1-42P-201ENST00000364033 SPRR2BP35325 72 aa0.67□□□□□ -2.3
RNU1-42P-201ENST00000364033 SPRR2AP35326 72 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms