RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 PRO0461Q9UI25 63 aa7.11□□□□□ -1.27
LINC01116-202ENST00000339037 UBL5Q9BZL1 73 aa7.09□□□□□ -1.27
LINC01116-202ENST00000339037 PCP4L1A6NKN8 68 aa7.08□□□□□ -1.28
LINC01116-202ENST00000339037 MT1BP07438 61 aa7.08□□□□□ -1.28
LINC01116-202ENST00000339037 C5orf47Q569G3 176 aa7.08□□□□□ -1.28
LINC01116-202ENST00000339037 KMT2DO14686 5537 aa7.07□□□□□ -1.28
LINC01116-202ENST00000339037 Q5VV11 94 aa7.07□□□□□ -1.28
LINC01116-202ENST00000339037 K7EP34 96 aa7.06□□□□□ -1.28
LINC01116-202ENST00000339037 COL5A1-AS1Q5SY13 56 aa7.05□□□□□ -1.28
LINC01116-202ENST00000339037 KRTAP20-1Q3LI63 56 aa7.03□□□□□ -1.28
LINC01116-202ENST00000339037 SPRR2GQ9BYE4 73 aa7.02□□□□□ -1.29
LINC01116-202ENST00000339037 KRTAP19-8Q3LI54 63 aa7.01□□□□□ -1.29
LINC01116-202ENST00000339037 S4R3F8 94 aa7□□□□□ -1.29
LINC01116-202ENST00000339037 KRTAP10-5P60370 271 aa6.98□□□□□ -1.29
LINC01116-202ENST00000339037 CSAG1Q6PB30 78 aa6.98□□□□□ -1.29
LINC01116-202ENST00000339037 C1orf64Q8NEQ6 169 aa6.98□□□□□ -1.29
LINC01116-202ENST00000339037 LCA10Q71F78 164 aa6.97□□□□□ -1.29
LINC01116-202ENST00000339037 KRTAP5-9P26371 169 aa6.96□□□□□ -1.3
LINC01116-202ENST00000339037 TP53AIP1Q9HCN2 124 aa6.94□□□□□ -1.3
LINC01116-202ENST00000339037 LCE1AQ5T7P2 110 aa6.93□□□□□ -1.3
LINC01116-202ENST00000339037 ETDBQ3ZM63 59 aa6.91□□□□□ -1.3
LINC01116-202ENST00000339037 GTF2H5Q6ZYL4 71 aa6.91□□□□□ -1.3
LINC01116-202ENST00000339037 KLKP1Q107X0 134 aa6.9□□□□□ -1.3
LINC01116-202ENST00000339037 F8W1H4 67 aa6.89□□□□□ -1.31
LINC01116-202ENST00000339037 IMUPQ9GZP8 106 aa6.85□□□□□ -1.31
LINC01116-202ENST00000339037 CYP4F30PQ9H0H9 118 aa6.85□□□□□ -1.31
LINC01116-202ENST00000339037 A0A087WVE0 104 aa6.83□□□□□ -1.32
LINC01116-202ENST00000339037 TRAV22A0A0B4J277 110 aa6.81□□□□□ -1.32
LINC01116-202ENST00000339037 CRIPTQ9P021 101 aa6.79□□□□□ -1.32
LINC01116-202ENST00000339037 LOC101927531A0A1B0GV80 90 aa6.77□□□□□ -1.33
LINC01116-202ENST00000339037 A0A1B0GV90 55 aa6.76□□□□□ -1.33
LINC01116-202ENST00000339037 KRTAP2-3P0C7H8 128 aa6.75□□□□□ -1.33
LINC01116-202ENST00000339037 KRTAP2-4Q9BYR9 128 aa6.75□□□□□ -1.33
LINC01116-202ENST00000339037 ACYP1P07311 99 aa6.73□□□□□ -1.33
LINC01116-202ENST00000339037 HIST1H4AP62805 103 aaKnown RBP6.71□□□□□ -1.34
LINC01116-202ENST00000339037 ATP5EP2Q5VTU8 51 aa6.71□□□□□ -1.34
LINC01116-202ENST00000339037 PRAC1Q96KF2 57 aa6.71□□□□□ -1.34
LINC01116-202ENST00000339037 FAM240AA0A1B0GVK7 77 aa6.7□□□□□ -1.34
LINC01116-202ENST00000339037 H0Y9P7 68 aa6.7□□□□□ -1.34
LINC01116-202ENST00000339037 SPRR2FQ96RM1 72 aa6.69□□□□□ -1.34
LINC01116-202ENST00000339037 UQCRQO14949 82 aa6.68□□□□□ -1.34
LINC01116-202ENST00000339037 SPRR2EP22531 72 aa6.66□□□□□ -1.34
LINC01116-202ENST00000339037 SPRR2BP35325 72 aa6.66□□□□□ -1.34
LINC01116-202ENST00000339037 SPRR2AP35326 72 aa6.66□□□□□ -1.34
LINC01116-202ENST00000339037 ATOX1O00244 68 aa6.65□□□□□ -1.34
LINC01116-202ENST00000339037 NDUFC1O43677 76 aa6.63□□□□□ -1.35
LINC01116-202ENST00000339037 PRO2289Q9P1D8 64 aa6.63□□□□□ -1.35
LINC01116-202ENST00000339037 H0YAA0 97 aa6.62□□□□□ -1.35
LINC01116-202ENST00000339037 LINC00208Q96KT6 92 aa6.58□□□□□ -1.36
LINC01116-202ENST00000339037 A8MUN3 132 aa6.57□□□□□ -1.36
LINC01116-202ENST00000339037 MT1XP80297 61 aa6.57□□□□□ -1.36
LINC01116-202ENST00000339037 ADM2Q7Z4H4 148 aa6.57□□□□□ -1.36
LINC01116-202ENST00000339037 LINC00643Q86TS7 51 aa6.57□□□□□ -1.36
LINC01116-202ENST00000339037 KRTAP8-1Q8IUC2 63 aa6.56□□□□□ -1.36
LINC01116-202ENST00000339037 OCR1Q9BZK8 76 aa6.53□□□□□ -1.36
LINC01116-202ENST00000339037 KRTAP2-2Q9BYT5 123 aa6.52□□□□□ -1.37
LINC01116-202ENST00000339037 KRTAP2-1Q9BYU5 128 aa6.52□□□□□ -1.37
LINC01116-202ENST00000339037 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
LINC01116-202ENST00000339037 MP68P56378 58 aa6.49□□□□□ -1.37
LINC01116-202ENST00000339037 KRTAP12-2P59991 146 aa6.47□□□□□ -1.37
LINC01116-202ENST00000339037 SPRR2DP22532 72 aa6.45□□□□□ -1.38
LINC01116-202ENST00000339037 P0C880 135 aa6.42□□□□□ -1.38
LINC01116-202ENST00000339037 R4GN34 69 aa6.41□□□□□ -1.38
LINC01116-202ENST00000339037 DMAC1Q96GE9 116 aa6.39□□□□□ -1.39
LINC01116-202ENST00000339037 H3BPC8 53 aa6.37□□□□□ -1.39
LINC01116-202ENST00000339037 MT3P25713 68 aa6.37□□□□□ -1.39
LINC01116-202ENST00000339037 M0QZ58 72 aa6.36□□□□□ -1.39
LINC01116-202ENST00000339037 KRTAP5-3Q6L8H2 238 aa6.36□□□□□ -1.39
LINC01116-202ENST00000339037 C20orf197Q8N268 126 aa6.35□□□□□ -1.39
LINC01116-202ENST00000339037 SCGB1A1P11684 91 aa6.3□□□□□ -1.4
LINC01116-202ENST00000339037 J3QR89 54 aa6.29□□□□□ -1.4
LINC01116-202ENST00000339037 LINC01554Q52M75 96 aa6.28□□□□□ -1.4
LINC01116-202ENST00000339037 KRTAP10-7P60409 375 aaPredicted RBP6.26□□□□□ -1.41
LINC01116-202ENST00000339037 NDUFAF8A1L188 74 aa6.25□□□□□ -1.41
LINC01116-202ENST00000339037 K7ERU9 68 aa6.25□□□□□ -1.41
LINC01116-202ENST00000339037 GPR98Q8WXG9 6306 aa6.23□□□□□ -1.41
LINC01116-202ENST00000339037 TRAV7A0A075B6U4 112 aa6.23□□□□□ -1.41
LINC01116-202ENST00000339037 KRTAP10-12P60413 245 aa6.23□□□□□ -1.41
LINC01116-202ENST00000339037 ACYP2P14621 99 aa6.18□□□□□ -1.42
LINC01116-202ENST00000339037 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
LINC01116-202ENST00000339037 MT-ATP8P03928 68 aa6.14□□□□□ -1.43
LINC01116-202ENST00000339037 SPTSSBQ8NFR3 76 aa6.1□□□□□ -1.43
LINC01116-202ENST00000339037 SMIM20Q8N5G0 67 aa6.09□□□□□ -1.43
LINC01116-202ENST00000339037 CHKB-CPT1BH3BT56 60 aa6.06□□□□□ -1.44
LINC01116-202ENST00000339037 SNURFQ9Y675 71 aa6.05□□□□□ -1.44
LINC01116-202ENST00000339037 KRTAP13-4Q3LI77 160 aa5.97□□□□□ -1.45
LINC01116-202ENST00000339037 SPANXA2-OT1Q8N9U9 137 aa5.95□□□□□ -1.46
LINC01116-202ENST00000339037 LCE1FQ5T754 118 aa5.94□□□□□ -1.46
LINC01116-202ENST00000339037 SERP2Q8N6R1 65 aa5.88□□□□□ -1.47
LINC01116-202ENST00000339037 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
LINC01116-202ENST00000339037 KRTAP19-3Q7Z4W3 81 aa5.86□□□□□ -1.47
LINC01116-202ENST00000339037 CAMK2N1Q7Z7J9 78 aa5.86□□□□□ -1.47
LINC01116-202ENST00000339037 HMCN1Q96RW7 5635 aa5.84□□□□□ -1.47
LINC01116-202ENST00000339037 MT1EP04732 61 aa5.84□□□□□ -1.47
LINC01116-202ENST00000339037 COA5Q86WW8 74 aa5.81□□□□□ -1.48
LINC01116-202ENST00000339037 CYSTM1Q9H1C7 97 aa5.76□□□□□ -1.49
LINC01116-202ENST00000339037 A0A0D9SG42 100 aa5.75□□□□□ -1.49
LINC01116-202ENST00000339037 AHNAK2Q8IVF2 5795 aa5.73□□□□□ -1.49
LINC01116-202ENST00000339037 SPATA8Q6RVD6 105 aa5.73□□□□□ -1.49
LINC01116-202ENST00000339037 COX7CP15954 63 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms