RNA–Protein interactions for RNA: ENST00000289175.10

LRRFIP1-202, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-202ENST00000289175 HRES1P13985 223 aa7.5□□□□□ -1.21
LRRFIP1-202ENST00000289175 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
LRRFIP1-202ENST00000289175 CDC42SE1Q9NRR8 79 aa7.48□□□□□ -1.21
LRRFIP1-202ENST00000289175 RPL37P61927 97 aaKnown RBP7.46□□□□□ -1.22
LRRFIP1-202ENST00000289175 ASB16-AS1Q495Z4 193 aa7.45□□□□□ -1.22
LRRFIP1-202ENST00000289175 ACYP2P14621 99 aa7.44□□□□□ -1.22
LRRFIP1-202ENST00000289175 Q75L30 129 aa7.44□□□□□ -1.22
LRRFIP1-202ENST00000289175 RPS29P62273 56 aaKnown RBP7.43□□□□□ -1.22
LRRFIP1-202ENST00000289175 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
LRRFIP1-202ENST00000289175 FAT4Q6V0I7 4981 aa7.38□□□□□ -1.23
LRRFIP1-202ENST00000289175 TNXBP22105 4242 aa7.36□□□□□ -1.23
LRRFIP1-202ENST00000289175 FSIP2Q5CZC0 6907 aa7.36□□□□□ -1.23
LRRFIP1-202ENST00000289175 A8MUU9 505 aa7.36□□□□□ -1.23
LRRFIP1-202ENST00000289175 LINC01558Q9Y6Z2 57 aa7.35□□□□□ -1.23
LRRFIP1-202ENST00000289175 C20orf166-AS1Q96NR2 134 aa7.34□□□□□ -1.23
LRRFIP1-202ENST00000289175 ADM2Q7Z4H4 148 aa7.34□□□□□ -1.23
LRRFIP1-202ENST00000289175 LINC01554Q52M75 96 aa7.34□□□□□ -1.24
LRRFIP1-202ENST00000289175 MIR22HGQ0VDD5 57 aa7.32□□□□□ -1.24
LRRFIP1-202ENST00000289175 UQCR11O14957 56 aa7.3□□□□□ -1.24
LRRFIP1-202ENST00000289175 A6NN06 94 aa7.28□□□□□ -1.24
LRRFIP1-202ENST00000289175 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.25
LRRFIP1-202ENST00000289175 CSAG1Q6PB30 78 aa7.21□□□□□ -1.26
LRRFIP1-202ENST00000289175 H3BS24 57 aa7.2□□□□□ -1.26
LRRFIP1-202ENST00000289175 HMCN2Q8NDA2 5059 aa7.19□□□□□ -1.26
LRRFIP1-202ENST00000289175 CRIPTQ9P021 101 aa7.18□□□□□ -1.26
LRRFIP1-202ENST00000289175 A0A0D9SG42 100 aa7.17□□□□□ -1.26
LRRFIP1-202ENST00000289175 S4R3F8 94 aa7.17□□□□□ -1.26
LRRFIP1-202ENST00000289175 K7ERS5 55 aa7.14□□□□□ -1.27
LRRFIP1-202ENST00000289175 H1FX-AS1Q4G0G2 97 aa7.05□□□□□ -1.28
LRRFIP1-202ENST00000289175 KRTAP3-1Q9BYR8 98 aa7.05□□□□□ -1.28
LRRFIP1-202ENST00000289175 DMAC1Q96GE9 116 aa7.03□□□□□ -1.28
LRRFIP1-202ENST00000289175 SPATA8Q6RVD6 105 aa6.97□□□□□ -1.29
LRRFIP1-202ENST00000289175 SPINT4Q6UDR6 99 aa6.97□□□□□ -1.29
LRRFIP1-202ENST00000289175 A0A1B0GU33 70 aa6.93□□□□□ -1.3
LRRFIP1-202ENST00000289175 KRTAP10-10P60014 251 aa6.93□□□□□ -1.3
LRRFIP1-202ENST00000289175 R4GN34 69 aa6.88□□□□□ -1.31
LRRFIP1-202ENST00000289175 M0QZ58 72 aa6.87□□□□□ -1.31
LRRFIP1-202ENST00000289175 P0C880 135 aa6.87□□□□□ -1.31
LRRFIP1-202ENST00000289175 KRTAP25-1Q3LHN0 102 aa6.73□□□□□ -1.33
LRRFIP1-202ENST00000289175 USH2AO75445 5202 aa6.7□□□□□ -1.34
LRRFIP1-202ENST00000289175 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
LRRFIP1-202ENST00000289175 H0YAA0 97 aa6.69□□□□□ -1.34
LRRFIP1-202ENST00000289175 MT1HP80294 61 aa6.69□□□□□ -1.34
LRRFIP1-202ENST00000289175 KRTAP3-3Q9BYR6 98 aa6.69□□□□□ -1.34
LRRFIP1-202ENST00000289175 ROMO1P60602 79 aa6.68□□□□□ -1.34
LRRFIP1-202ENST00000289175 CAMK2N1Q7Z7J9 78 aa6.67□□□□□ -1.34
LRRFIP1-202ENST00000289175 MUC17Q685J3 4493 aa6.65□□□□□ -1.34
LRRFIP1-202ENST00000289175 C10orf95Q9H7T3 257 aa6.58□□□□□ -1.36
LRRFIP1-202ENST00000289175 LCE2CQ5TA81 110 aa6.58□□□□□ -1.36
LRRFIP1-202ENST00000289175 NDUFAF8A1L188 74 aa6.55□□□□□ -1.36
LRRFIP1-202ENST00000289175 KRTAP13-4Q3LI77 160 aa6.52□□□□□ -1.37
LRRFIP1-202ENST00000289175 KRTAP19-2Q3LHN2 52 aa6.51□□□□□ -1.37
LRRFIP1-202ENST00000289175 KRTAP10-6P60371 365 aaPredicted RBP6.46□□□□□ -1.37
LRRFIP1-202ENST00000289175 MT1FP04733 61 aa6.46□□□□□ -1.38
LRRFIP1-202ENST00000289175 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
LRRFIP1-202ENST00000289175 MT2AP02795 61 aa6.42□□□□□ -1.38
LRRFIP1-202ENST00000289175 KRTAP3-2Q9BYR7 98 aa6.42□□□□□ -1.38
LRRFIP1-202ENST00000289175 FLGP20930 4061 aaPredicted RBP6.41□□□□□ -1.38
LRRFIP1-202ENST00000289175 KRTAP12-2P59991 146 aa6.31□□□□□ -1.4
LRRFIP1-202ENST00000289175 KRTAP9-8Q9BYQ0 159 aa6.27□□□□□ -1.41
LRRFIP1-202ENST00000289175 LUZP6Q538Z0 58 aa6.21□□□□□ -1.42
LRRFIP1-202ENST00000289175 LCE2AQ5TA79 106 aaPredicted RBP6.17□□□□□ -1.42
LRRFIP1-202ENST00000289175 KRTAP12-1P59990 96 aa6.15□□□□□ -1.42
LRRFIP1-202ENST00000289175 KMT2DO14686 5537 aa6.13□□□□□ -1.43
LRRFIP1-202ENST00000289175 KRTAP19-1Q8IUB9 90 aa6.11□□□□□ -1.43
LRRFIP1-202ENST00000289175 LCE2BO14633 110 aa6.09□□□□□ -1.44
LRRFIP1-202ENST00000289175 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
LRRFIP1-202ENST00000289175 KRTAP9-2Q9BYQ4 174 aa6□□□□□ -1.45
LRRFIP1-202ENST00000289175 A0A0A0MQY5 61 aa5.98□□□□□ -1.45
LRRFIP1-202ENST00000289175 SSPOA2VEC9 5147 aa5.98□□□□□ -1.45
LRRFIP1-202ENST00000289175 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
LRRFIP1-202ENST00000289175 SYNE2Q8WXH0 6885 aaKnown RBP5.94□□□□□ -1.46
LRRFIP1-202ENST00000289175 TNP1P09430 55 aa5.91□□□□□ -1.46
LRRFIP1-202ENST00000289175 SPRR2GQ9BYE4 73 aa5.9□□□□□ -1.46
LRRFIP1-202ENST00000289175 DSTQ03001 7570 aaKnown RBP5.9□□□□□ -1.46
LRRFIP1-202ENST00000289175 PRO2289Q9P1D8 64 aa5.89□□□□□ -1.47
LRRFIP1-202ENST00000289175 MT1BP07438 61 aa5.89□□□□□ -1.47
LRRFIP1-202ENST00000289175 MACF1Q9UPN3 7388 aaKnown RBP5.81□□□□□ -1.48
LRRFIP1-202ENST00000289175 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
LRRFIP1-202ENST00000289175 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
LRRFIP1-202ENST00000289175 FCGBPQ9Y6R7 5405 aaPredicted RBP5.79□□□□□ -1.48
LRRFIP1-202ENST00000289175 OBSCNQ5VST9 7968 aa5.77□□□□□ -1.49
LRRFIP1-202ENST00000289175 CRCT1Q9UGL9 99 aa5.75□□□□□ -1.49
LRRFIP1-202ENST00000289175 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
LRRFIP1-202ENST00000289175 MUC12Q9UKN1 5478 aa5.71□□□□□ -1.5
LRRFIP1-202ENST00000289175 MT1XP80297 61 aa5.7□□□□□ -1.5
LRRFIP1-202ENST00000289175 KRTAP10-5P60370 271 aa5.66□□□□□ -1.5
LRRFIP1-202ENST00000289175 KRTAP19-8Q3LI54 63 aa5.66□□□□□ -1.5
LRRFIP1-202ENST00000289175 LCE3AQ5TA76 89 aa5.65□□□□□ -1.5
LRRFIP1-202ENST00000289175 KRTAP10-12P60413 245 aa5.65□□□□□ -1.51
LRRFIP1-202ENST00000289175 PP632Q6XCG6 107 aa5.59□□□□□ -1.51
LRRFIP1-202ENST00000289175 KRTAP8-1Q8IUC2 63 aa5.58□□□□□ -1.52
LRRFIP1-202ENST00000289175 SPRR2FQ96RM1 72 aa5.56□□□□□ -1.52
LRRFIP1-202ENST00000289175 KRTAP9-6A0A140TA67 174 aa5.53□□□□□ -1.52
LRRFIP1-202ENST00000289175 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
LRRFIP1-202ENST00000289175 LCE2DQ5TA82 110 aaPredicted RBP5.46□□□□□ -1.54
LRRFIP1-202ENST00000289175 MDN1Q9NU22 5596 aa5.42□□□□□ -1.54
LRRFIP1-202ENST00000289175 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
LRRFIP1-202ENST00000289175 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
LRRFIP1-202ENST00000289175 KRTAP19-6Q3LI70 58 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms