RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 FAT4Q6V0I7 4981 aa9.58□□□□□ -0.88
SDF4-201ENST00000263741 HRES1P13985 223 aa9.53□□□□□ -0.88
SDF4-201ENST00000263741 LINC01558Q9Y6Z2 57 aa9.53□□□□□ -0.88
SDF4-201ENST00000263741 Q5W150 140 aa9.51□□□□□ -0.89
SDF4-201ENST00000263741 A6NED7 52 aa9.49□□□□□ -0.89
SDF4-201ENST00000263741 KRTAP19-2Q3LHN2 52 aa9.49□□□□□ -0.89
SDF4-201ENST00000263741 ACYP2P14621 99 aa9.46□□□□□ -0.89
SDF4-201ENST00000263741 KTN1-AS1Q86SY8 53 aa9.46□□□□□ -0.9
SDF4-201ENST00000263741 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
SDF4-201ENST00000263741 DMAC1Q96GE9 116 aa9.4□□□□□ -0.9
SDF4-201ENST00000263741 CDC42SE1Q9NRR8 79 aa9.4□□□□□ -0.9
SDF4-201ENST00000263741 IGKV2-30P06310 120 aa9.38□□□□□ -0.91
SDF4-201ENST00000263741 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
SDF4-201ENST00000263741 COX6B2Q6YFQ2 88 aa9.38□□□□□ -0.91
SDF4-201ENST00000263741 SPINK7P58062 85 aa9.36□□□□□ -0.91
SDF4-201ENST00000263741 A8MU10 97 aa9.35□□□□□ -0.91
SDF4-201ENST00000263741 LCA10Q71F78 164 aa9.35□□□□□ -0.91
SDF4-201ENST00000263741 SPTSSBQ8NFR3 76 aa9.35□□□□□ -0.91
SDF4-201ENST00000263741 MT1HP80294 61 aa9.3□□□□□ -0.92
SDF4-201ENST00000263741 IGKV2D-30A0A075B6S6 120 aa9.28□□□□□ -0.92
SDF4-201ENST00000263741 FLGP20930 4061 aaPredicted RBP9.26□□□□□ -0.93
SDF4-201ENST00000263741 C7orf65Q6ZTY9 151 aa9.22□□□□□ -0.93
SDF4-201ENST00000263741 A0A1B0GU69 56 aa9.2□□□□□ -0.94
SDF4-201ENST00000263741 A6NN06 94 aa9.19□□□□□ -0.94
SDF4-201ENST00000263741 M0R2T5 61 aa9.16□□□□□ -0.94
SDF4-201ENST00000263741 UQCR11O14957 56 aa9.05□□□□□ -0.96
SDF4-201ENST00000263741 KRTAP10-6P60371 365 aaPredicted RBP9.04□□□□□ -0.96
SDF4-201ENST00000263741 SPATA8Q6RVD6 105 aa9.03□□□□□ -0.96
SDF4-201ENST00000263741 LORP23490 312 aaPredicted RBP9.01□□□□□ -0.97
SDF4-201ENST00000263741 MIR22HGQ0VDD5 57 aa9.01□□□□□ -0.97
SDF4-201ENST00000263741 H1FX-AS1Q4G0G2 97 aa8.96□□□□□ -0.97
SDF4-201ENST00000263741 LINC01554Q52M75 96 aa8.95□□□□□ -0.98
SDF4-201ENST00000263741 KRTAP3-1Q9BYR8 98 aa8.95□□□□□ -0.98
SDF4-201ENST00000263741 KRTAP9-8Q9BYQ0 159 aa8.85□□□□□ -0.99
SDF4-201ENST00000263741 KRTAP9-2Q9BYQ4 174 aa8.8□□□□□ -1
SDF4-201ENST00000263741 MT2AP02795 61 aa8.79□□□□□ -1
SDF4-201ENST00000263741 S4R3F8 94 aa8.78□□□□□ -1
SDF4-201ENST00000263741 MT1FP04733 61 aa8.74□□□□□ -1.01
SDF4-201ENST00000263741 PRAC1Q96KF2 57 aa8.71□□□□□ -1.02
SDF4-201ENST00000263741 LCE2DQ5TA82 110 aaPredicted RBP8.7□□□□□ -1.02
SDF4-201ENST00000263741 A0A1B0GU33 70 aa8.68□□□□□ -1.02
SDF4-201ENST00000263741 KRTAP10-10P60014 251 aa8.67□□□□□ -1.02
SDF4-201ENST00000263741 KRTAP3-3Q9BYR6 98 aa8.66□□□□□ -1.02
SDF4-201ENST00000263741 H0YAA0 97 aa8.65□□□□□ -1.03
SDF4-201ENST00000263741 ADM2Q7Z4H4 148 aa8.64□□□□□ -1.03
SDF4-201ENST00000263741 CSAG1Q6PB30 78 aa8.62□□□□□ -1.03
SDF4-201ENST00000263741 FSIP2Q5CZC0 6907 aa8.56□□□□□ -1.04
SDF4-201ENST00000263741 KRTAP9-3Q9BYQ3 159 aa8.55□□□□□ -1.04
SDF4-201ENST00000263741 K7ERS5 55 aa8.54□□□□□ -1.04
SDF4-201ENST00000263741 LCE2BO14633 110 aa8.46□□□□□ -1.05
SDF4-201ENST00000263741 USH2AO75445 5202 aa8.39□□□□□ -1.07
SDF4-201ENST00000263741 CRCT1Q9UGL9 99 aa8.36□□□□□ -1.07
SDF4-201ENST00000263741 KRTAP9-6A0A140TA67 174 aa8.35□□□□□ -1.07
SDF4-201ENST00000263741 KRTAP25-1Q3LHN0 102 aa8.33□□□□□ -1.08
SDF4-201ENST00000263741 KRTAP19-1Q8IUB9 90 aa8.31□□□□□ -1.08
SDF4-201ENST00000263741 ROMO1P60602 79 aa8.29□□□□□ -1.08
SDF4-201ENST00000263741 KRTAP3-2Q9BYR7 98 aa8.26□□□□□ -1.09
SDF4-201ENST00000263741 SSPOA2VEC9 5147 aa8.26□□□□□ -1.09
SDF4-201ENST00000263741 P0C880 135 aa8.22□□□□□ -1.09
SDF4-201ENST00000263741 SPRR2GQ9BYE4 73 aa8.22□□□□□ -1.09
SDF4-201ENST00000263741 A0A0D9SG42 100 aa8.2□□□□□ -1.1
SDF4-201ENST00000263741 KRTAP13-4Q3LI77 160 aa8.2□□□□□ -1.1
SDF4-201ENST00000263741 CRIPTQ9P021 101 aa8.16□□□□□ -1.1
SDF4-201ENST00000263741 MT1BP07438 61 aa8.11□□□□□ -1.11
SDF4-201ENST00000263741 KRTAP19-8Q3LI54 63 aa8.1□□□□□ -1.11
SDF4-201ENST00000263741 LUZP6Q538Z0 58 aa8.06□□□□□ -1.12
SDF4-201ENST00000263741 R4GN34 69 aa8.06□□□□□ -1.12
SDF4-201ENST00000263741 M0QZ58 72 aa8.04□□□□□ -1.12
SDF4-201ENST00000263741 KRTAP19-6Q3LI70 58 aa8.03□□□□□ -1.12
SDF4-201ENST00000263741 FCGBPQ9Y6R7 5405 aaPredicted RBP7.99□□□□□ -1.13
SDF4-201ENST00000263741 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
SDF4-201ENST00000263741 SPINT4Q6UDR6 99 aa7.96□□□□□ -1.13
SDF4-201ENST00000263741 KRTAP12-1P59990 96 aa7.95□□□□□ -1.14
SDF4-201ENST00000263741 KRTAP10-5P60370 271 aa7.8□□□□□ -1.16
SDF4-201ENST00000263741 C10orf95Q9H7T3 257 aa7.8□□□□□ -1.16
SDF4-201ENST00000263741 PLAC4Q8WY50 150 aa7.8□□□□□ -1.16
SDF4-201ENST00000263741 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.79□□□□□ -1.16
SDF4-201ENST00000263741 NDUFAF8A1L188 74 aa7.75□□□□□ -1.17
SDF4-201ENST00000263741 MACF1Q9UPN3 7388 aaKnown RBP7.73□□□□□ -1.17
SDF4-201ENST00000263741 MT1XP80297 61 aa7.7□□□□□ -1.18
SDF4-201ENST00000263741 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
SDF4-201ENST00000263741 PRO2289Q9P1D8 64 aa7.61□□□□□ -1.19
SDF4-201ENST00000263741 SYNE2Q8WXH0 6885 aaKnown RBP7.61□□□□□ -1.19
SDF4-201ENST00000263741 KRTAP15-1Q3LI76 137 aa7.59□□□□□ -1.19
SDF4-201ENST00000263741 KRTAP9-7A8MTY7 169 aa7.56□□□□□ -1.2
SDF4-201ENST00000263741 KRTAP23-1A1A580 65 aa7.45□□□□□ -1.22
SDF4-201ENST00000263741 KMT2DO14686 5537 aa7.39□□□□□ -1.23
SDF4-201ENST00000263741 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
SDF4-201ENST00000263741 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
SDF4-201ENST00000263741 KRTAP6-3Q3LI67 103 aa7.35□□□□□ -1.23
SDF4-201ENST00000263741 KRTAP4-8A0A0G2JLE6 195 aa7.29□□□□□ -1.24
SDF4-201ENST00000263741 KRTAP4-8Q9BYQ9 185 aa7.29□□□□□ -1.24
SDF4-201ENST00000263741 KRTAP10-12P60413 245 aa7.28□□□□□ -1.24
SDF4-201ENST00000263741 KRTAP8-1Q8IUC2 63 aa7.21□□□□□ -1.25
SDF4-201ENST00000263741 KRTAP5-9P26371 169 aa7.19□□□□□ -1.26
SDF4-201ENST00000263741 TNP1P09430 55 aa7.17□□□□□ -1.26
SDF4-201ENST00000263741 SPRR2FQ96RM1 72 aa7.14□□□□□ -1.27
SDF4-201ENST00000263741 MUC12Q9UKN1 5478 aa7.13□□□□□ -1.27
SDF4-201ENST00000263741 NEBP20929 6669 aa7.03□□□□□ -1.28
SDF4-201ENST00000263741 MDN1Q9NU22 5596 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms