RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 C1orf64Q8NEQ6 169 aa6.73□□□□□ -1.33
DDX39A-201ENST00000242776 MPLKIPQ8TAP9 179 aa6.73□□□□□ -1.33
DDX39A-201ENST00000242776 LINC00208Q96KT6 92 aa6.73□□□□□ -1.33
DDX39A-201ENST00000242776 SERP2Q8N6R1 65 aa6.72□□□□□ -1.33
DDX39A-201ENST00000242776 CYP4F30PQ9H0H9 118 aa6.7□□□□□ -1.34
DDX39A-201ENST00000242776 NEBP20929 6669 aa6.68□□□□□ -1.34
DDX39A-201ENST00000242776 ANAPC13Q9BS18 74 aa6.65□□□□□ -1.35
DDX39A-201ENST00000242776 COX7CP15954 63 aa6.63□□□□□ -1.35
DDX39A-201ENST00000242776 C4orf26Q17RF5 130 aa6.61□□□□□ -1.35
DDX39A-201ENST00000242776 C20orf197Q8N268 126 aa6.6□□□□□ -1.35
DDX39A-201ENST00000242776 KLKP1Q107X0 134 aa6.6□□□□□ -1.35
DDX39A-201ENST00000242776 SNURFQ9Y675 71 aa6.59□□□□□ -1.36
DDX39A-201ENST00000242776 PCP4P48539 62 aa6.53□□□□□ -1.36
DDX39A-201ENST00000242776 H1FX-AS1Q4G0G2 97 aa6.53□□□□□ -1.36
DDX39A-201ENST00000242776 A8MUN3 132 aa6.52□□□□□ -1.37
DDX39A-201ENST00000242776 KRTAP20-1Q3LI63 56 aa6.51□□□□□ -1.37
DDX39A-201ENST00000242776 MUC12Q9UKN1 5478 aa6.5□□□□□ -1.37
DDX39A-201ENST00000242776 NDUFC1O43677 76 aa6.5□□□□□ -1.37
DDX39A-201ENST00000242776 KRTAP3-1Q9BYR8 98 aa6.47□□□□□ -1.37
DDX39A-201ENST00000242776 SPANXA2-OT1Q8N9U9 137 aa6.47□□□□□ -1.37
DDX39A-201ENST00000242776 CCDC179H3BU77 68 aa6.45□□□□□ -1.38
DDX39A-201ENST00000242776 DMAC1Q96GE9 116 aa6.45□□□□□ -1.38
DDX39A-201ENST00000242776 S4R3F8 94 aa6.44□□□□□ -1.38
DDX39A-201ENST00000242776 H7BZZ5 65 aa6.41□□□□□ -1.38
DDX39A-201ENST00000242776 ACYP2P14621 99 aa6.41□□□□□ -1.38
DDX39A-201ENST00000242776 A6NN06 94 aa6.4□□□□□ -1.39
DDX39A-201ENST00000242776 CYSTM1Q9H1C7 97 aa6.39□□□□□ -1.39
DDX39A-201ENST00000242776 LCA10Q71F78 164 aa6.37□□□□□ -1.39
DDX39A-201ENST00000242776 CSAG1Q6PB30 78 aa6.33□□□□□ -1.4
DDX39A-201ENST00000242776 ATP5EP56381 51 aaPredicted RBP6.32□□□□□ -1.4
DDX39A-201ENST00000242776 CHKB-CPT1BH3BT56 60 aa6.31□□□□□ -1.4
DDX39A-201ENST00000242776 TMEM258P61165 79 aa6.29□□□□□ -1.4
DDX39A-201ENST00000242776 SPTSSBQ8NFR3 76 aa6.28□□□□□ -1.4
DDX39A-201ENST00000242776 KRTAP3-3Q9BYR6 98 aa6.28□□□□□ -1.4
DDX39A-201ENST00000242776 MT1BP07438 61 aa6.27□□□□□ -1.41
DDX39A-201ENST00000242776 Q5VV11 94 aa6.24□□□□□ -1.41
DDX39A-201ENST00000242776 COA5Q86WW8 74 aa6.24□□□□□ -1.41
DDX39A-201ENST00000242776 MDN1Q9NU22 5596 aa6.23□□□□□ -1.41
DDX39A-201ENST00000242776 KRTAP5-9P26371 169 aa6.22□□□□□ -1.41
DDX39A-201ENST00000242776 KMT2DO14686 5537 aa6.22□□□□□ -1.41
DDX39A-201ENST00000242776 KRTAP10-5P60370 271 aa6.2□□□□□ -1.42
DDX39A-201ENST00000242776 KRTAP2-3P0C7H8 128 aa6.19□□□□□ -1.42
DDX39A-201ENST00000242776 KRTAP2-4Q9BYR9 128 aa6.19□□□□□ -1.42
DDX39A-201ENST00000242776 H0YAA0 97 aa6.15□□□□□ -1.43
DDX39A-201ENST00000242776 KRTAP19-8Q3LI54 63 aa6.15□□□□□ -1.43
DDX39A-201ENST00000242776 SPRR2GQ9BYE4 73 aa6.1□□□□□ -1.43
DDX39A-201ENST00000242776 ADM2Q7Z4H4 148 aa6.09□□□□□ -1.44
DDX39A-201ENST00000242776 SERP1Q9Y6X1 66 aa6.09□□□□□ -1.44
DDX39A-201ENST00000242776 SPRR2EP22531 72 aa6.08□□□□□ -1.44
DDX39A-201ENST00000242776 SPRR2BP35325 72 aa6.08□□□□□ -1.44
DDX39A-201ENST00000242776 SPRR2AP35326 72 aa6.08□□□□□ -1.44
DDX39A-201ENST00000242776 SPRR2FQ96RM1 72 aa6.05□□□□□ -1.44
DDX39A-201ENST00000242776 SEC61GP60059 68 aa6.02□□□□□ -1.44
DDX39A-201ENST00000242776 CRIPTQ9P021 101 aa6.02□□□□□ -1.45
DDX39A-201ENST00000242776 P0C880 135 aa5.97□□□□□ -1.45
DDX39A-201ENST00000242776 KRTAP3-2Q9BYR7 98 aa5.97□□□□□ -1.45
DDX39A-201ENST00000242776 KRTAP2-2Q9BYT5 123 aa5.96□□□□□ -1.46
DDX39A-201ENST00000242776 KRTAP2-1Q9BYU5 128 aa5.96□□□□□ -1.46
DDX39A-201ENST00000242776 A0A1B0GU69 56 aa5.94□□□□□ -1.46
DDX39A-201ENST00000242776 R4GN34 69 aa5.93□□□□□ -1.46
DDX39A-201ENST00000242776 PRR15LQ9BU68 103 aa5.92□□□□□ -1.46
DDX39A-201ENST00000242776 RPS28P62857 69 aaKnown RBP5.91□□□□□ -1.46
DDX39A-201ENST00000242776 LINC01558Q9Y6Z2 57 aa5.91□□□□□ -1.46
DDX39A-201ENST00000242776 V9GYY9 64 aa5.9□□□□□ -1.47
DDX39A-201ENST00000242776 M0QZ58 72 aa5.89□□□□□ -1.47
DDX39A-201ENST00000242776 SMIM26A0A096LP01 95 aa5.88□□□□□ -1.47
DDX39A-201ENST00000242776 LCE1AQ5T7P2 110 aa5.88□□□□□ -1.47
DDX39A-201ENST00000242776 SPRR2DP22532 72 aa5.87□□□□□ -1.47
DDX39A-201ENST00000242776 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
DDX39A-201ENST00000242776 SVIPQ8NHG7 77 aa5.86□□□□□ -1.47
DDX39A-201ENST00000242776 A0A1B0GU33 70 aa5.83□□□□□ -1.48
DDX39A-201ENST00000242776 Q1T7F1 81 aa5.83□□□□□ -1.48
DDX39A-201ENST00000242776 MT1XP80297 61 aa5.77□□□□□ -1.49
DDX39A-201ENST00000242776 LINC01554Q52M75 96 aa5.77□□□□□ -1.49
DDX39A-201ENST00000242776 PRO2289Q9P1D8 64 aa5.77□□□□□ -1.49
DDX39A-201ENST00000242776 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
DDX39A-201ENST00000242776 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
DDX39A-201ENST00000242776 KRTAP4-8A0A0G2JLE6 195 aa5.72□□□□□ -1.49
DDX39A-201ENST00000242776 PSPHP1O15172 72 aa5.72□□□□□ -1.49
DDX39A-201ENST00000242776 KRTAP4-8Q9BYQ9 185 aa5.72□□□□□ -1.49
DDX39A-201ENST00000242776 UQCR11O14957 56 aa5.71□□□□□ -1.49
DDX39A-201ENST00000242776 SPATA8Q6RVD6 105 aa5.71□□□□□ -1.49
DDX39A-201ENST00000242776 PLAC4Q8WY50 150 aa5.7□□□□□ -1.5
DDX39A-201ENST00000242776 GPR98Q8WXG9 6306 aa5.7□□□□□ -1.5
DDX39A-201ENST00000242776 A0A0D9SG42 100 aa5.65□□□□□ -1.5
DDX39A-201ENST00000242776 KRTAP12-2P59991 146 aa5.64□□□□□ -1.51
DDX39A-201ENST00000242776 MIR22HGQ0VDD5 57 aa5.61□□□□□ -1.51
DDX39A-201ENST00000242776 A6NED7 52 aa5.58□□□□□ -1.52
DDX39A-201ENST00000242776 A8MU10 97 aa5.58□□□□□ -1.52
DDX39A-201ENST00000242776 SPINT4Q6UDR6 99 aa5.57□□□□□ -1.52
DDX39A-201ENST00000242776 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
DDX39A-201ENST00000242776 KRTAP10-7P60409 375 aaPredicted RBP5.54□□□□□ -1.52
DDX39A-201ENST00000242776 KRTAP12-1P59990 96 aa5.53□□□□□ -1.52
DDX39A-201ENST00000242776 CAMK2N1Q7Z7J9 78 aa5.51□□□□□ -1.53
DDX39A-201ENST00000242776 KRTAP4-9Q9BYQ8 210 aa5.51□□□□□ -1.53
DDX39A-201ENST00000242776 K7ERS5 55 aa5.47□□□□□ -1.53
DDX39A-201ENST00000242776 CDC42SE1Q9NRR8 79 aa5.45□□□□□ -1.54
DDX39A-201ENST00000242776 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
DDX39A-201ENST00000242776 PRO0628Q9UI54 55 aa5.31□□□□□ -1.56
DDX39A-201ENST00000242776 BRK1Q8WUW1 75 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms