RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 P01638 115 aa13.19□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Gata3P23772 443 aa13.19□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Ccl24Q9JKC0 119 aa13.19□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Trav7-6A0A075B640 112 aa13.19□□□□□ -0.3
Col17a1-202ENSMUST00000086923 MsmpB1AWI6 139 aa13.19□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Spink6Q8BT20 105 aa13.19□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Igkv4-81A0A0G2JEY5 119 aa13.19□□□□□ -0.3
Col17a1-202ENSMUST00000086923 4930442H23RikQ9D5G7 103 aa13.19□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Prr3Q811B5 190 aaKnown RBP13.19□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Chchd5Q9CQP3 110 aa13.18□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Bcorl1A2AQH4 1781 aa13.18□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Gm17660B9UIU9 90 aa13.18□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Gm28038F7BCN9 126 aa13.18□□□□□ -0.3
Col17a1-202ENSMUST00000086923 IappP12968 93 aa13.18□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Sdhaf1Q3U276 118 aa13.18□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Prdm6Q3UZD5 596 aa13.18□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Ints1Q6P4S8 2195 aa13.18□□□□□ -0.3
Col17a1-202ENSMUST00000086923 RhohQ9D3G9 191 aa13.18□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Ncor2Q9WU42 2472 aaKnown RBP13.17□□□□□ -0.3
Col17a1-202ENSMUST00000086923 1700067P10RikG3X8U2 183 aa13.17□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Med13Q5SWW4 2171 aa13.17□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Vpreb1P13372 142 aa13.17□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Igkv4-57-1A0A075B5M4 119 aa13.17□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Igkv14-130A0A0G2JF45 117 aa13.17□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Tmem210Q9D2F0 147 aa13.17□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Olfr313Q5NC55 308 aa13.17□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Igkv14-111A0A140T8P9 117 aa13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Rnf183Q8QZS5 190 aa13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Spink12Q9D256 87 aa13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Gm15294V9GXA7 121 aa13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Srsf2Q62093 221 aaKnown RBP13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Atp5g3P56384 141 aa13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Atp5g1Q9CR84 136 aa13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Zfp236S4R299 1847 aa13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 P0C1Z5 52 aa13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Lyg1Q9D7Q0 197 aa13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 FancmQ8BGE5 2021 aa13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Scn5aQ9JJV9 2019 aa13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Nxph4G3X9N5 304 aa13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 RtbdnQ8QZY4 247 aa13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Pfn2Q9JJV2 140 aa13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Ovol1Q9WTJ2 267 aa13.16□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Igsf23B2RTN2 239 aa13.15□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Foxs1Q61574 329 aa13.15□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Ralgapa1Q6GYP7 2035 aa13.15□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Igkv6-14A0A140T8P1 115 aa13.15□□□□□ -0.3
Col17a1-202ENSMUST00000086923 Sptbn2Q68FG2 2388 aa13.15□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Pappa2E9PZ87 1789 aa13.14□□□□□ -0.31
Col17a1-202ENSMUST00000086923 PoleQ9WVF7 2283 aa13.14□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Cd27P41272 250 aa13.14□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Znrd1Q791N7 123 aa13.14□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Cox8cA6H666 72 aa13.14□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Igf1P05017 153 aa13.14□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Tex26Q0VB26 296 aa13.14□□□□□ -0.31
Col17a1-202ENSMUST00000086923 TprF6ZDS4 2431 aaKnown RBP13.14□□□□□ -0.31
Col17a1-202ENSMUST00000086923 BtcQ05928 177 aa13.14□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Asphd1Q2TA57 360 aa13.14□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Gm9936Q8C864 160 aa13.14□□□□□ -0.31
Col17a1-202ENSMUST00000086923 NynrinQ5DTZ0 1840 aa13.13□□□□□ -0.31
Col17a1-202ENSMUST00000086923 PhipQ8VDD9 1821 aaKnown RBP13.13□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Gtf3c1Q8K284 2101 aa13.13□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Dopey2Q3UHQ6 2295 aa13.13□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Inafm2A0A1L1STD6 152 aa13.13□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Myod1P10085 318 aa13.13□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Igkv4-68A0A0B4J1I7 117 aa13.12□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Tomm7Q9D173 55 aa13.12□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Stpg1Q9D2F5 341 aa13.12□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Trav14d-3-dv8A0A075B619 120 aa13.12□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Ighv1-19A0A0A6YWX0 117 aa13.12□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Rmi2Q3UPE3 149 aa13.12□□□□□ -0.31
Col17a1-202ENSMUST00000086923 PinlypQ9CQD7 212 aa13.12□□□□□ -0.31
Col17a1-202ENSMUST00000086923 C920008G01RikA0A0B4J1N1 112 aa13.12□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Igkv9-123A0A140T8N8 117 aa13.12□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Gm10645Q3UPY1 145 aa13.12□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Defb29Q8BGW9 78 aa13.12□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Ighv1-34A0A075B5V2 117 aa13.11□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Wdr86D3Z757 380 aa13.11□□□□□ -0.31
Col17a1-202ENSMUST00000086923 BikO70337 150 aa13.11□□□□□ -0.31
Col17a1-202ENSMUST00000086923 CtrlQ9ER05 264 aa13.11□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Vpreb2P13373 142 aa13.11□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Spata46Q4FZF2 204 aa13.11□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Igkv13-84A0A140T8N3 115 aa13.11□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Ighv1-62-3P01754 117 aa13.11□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Mpv17l2Q8VIK2 200 aa13.11□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Fam241bQ9D882 120 aa13.11□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Ahctf1Q8CJF7 2243 aaKnown RBP13.11□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Sdk1Q3UH53 2193 aa13.11□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Rchy1Q9CR50 261 aa13.11□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Lage3Q9CR70 148 aa13.11□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Greb1Q3UHK3 1954 aa13.11□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Gm17359A0A0G2JEB7 487 aa13.1□□□□□ -0.31
Col17a1-202ENSMUST00000086923 7420426K07RikQ3UX66 186 aa13.1□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Tmem86bQ497J1 226 aa13.1□□□□□ -0.31
Col17a1-202ENSMUST00000086923 MylkQ6PDN3 1941 aaKnown RBP13.1□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Gm1968Q3T9I3 115 aa13.09□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Myo9bQ9QY06 2114 aa13.09□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Trav11A0A0B4J1J9 114 aa13.09□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Hoxd3P09027 433 aa13.09□□□□□ -0.31
Col17a1-202ENSMUST00000086923 9230102O04RikA2ASX7 82 aa13.09□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Rpl36aP83882 106 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 51.3 ms