RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 A8MWP4 228 aa6.05□□□□□ -1.44
PHGDH-224ENST00000641711 HCG22E2RYF7 251 aa6.05□□□□□ -1.44
PHGDH-224ENST00000641711 MOBPQ13875 183 aa6.04□□□□□ -1.44
PHGDH-224ENST00000641711 PRR15Q8IV56 129 aa6.04□□□□□ -1.44
PHGDH-224ENST00000641711 PCLOQ9Y6V0 5065 aa6.03□□□□□ -1.44
PHGDH-224ENST00000641711 MT1HL1P0DM35 61 aa6.03□□□□□ -1.44
PHGDH-224ENST00000641711 DEFB116Q30KQ4 102 aa6.03□□□□□ -1.44
PHGDH-224ENST00000641711 NDUFC1O43677 76 aa6.02□□□□□ -1.45
PHGDH-224ENST00000641711 CD164Q04900 197 aa6.02□□□□□ -1.45
PHGDH-224ENST00000641711 SSBP3-AS1Q7Z2R9 100 aa6.02□□□□□ -1.45
PHGDH-224ENST00000641711 Q96NJ1 140 aa6.02□□□□□ -1.45
PHGDH-224ENST00000641711 H7BZZ5 65 aa6.01□□□□□ -1.45
PHGDH-224ENST00000641711 KRTAP10-8P60410 259 aa6.01□□□□□ -1.45
PHGDH-224ENST00000641711 TMEM254Q8TBM7 123 aa6.01□□□□□ -1.45
PHGDH-224ENST00000641711 ANAPC11Q9NYG5 84 aa6.01□□□□□ -1.45
PHGDH-224ENST00000641711 FAT3Q8TDW7 4589 aa6.01□□□□□ -1.45
PHGDH-224ENST00000641711 LRP1Q07954 4544 aaKnown RBP6□□□□□ -1.45
PHGDH-224ENST00000641711 A0A0U1RQV1 116 aa6□□□□□ -1.45
PHGDH-224ENST00000641711 RPS28P62857 69 aaKnown RBP5.99□□□□□ -1.45
PHGDH-224ENST00000641711 NDUFB1O75438 58 aa5.98□□□□□ -1.45
PHGDH-224ENST00000641711 PRR26Q8N8Z3 221 aa5.98□□□□□ -1.45
PHGDH-224ENST00000641711 SNURFQ9Y675 71 aa5.98□□□□□ -1.45
PHGDH-224ENST00000641711 C5orf47Q569G3 176 aa5.97□□□□□ -1.45
PHGDH-224ENST00000641711 CASC2Q6XLA1 102 aa5.97□□□□□ -1.45
PHGDH-224ENST00000641711 A0A087X002 238 aa5.96□□□□□ -1.46
PHGDH-224ENST00000641711 MMP24-AS1A0A0U1RRL7 71 aa5.96□□□□□ -1.46
PHGDH-224ENST00000641711 ASB16-AS1Q495Z4 193 aa5.96□□□□□ -1.46
PHGDH-224ENST00000641711 HRCT1Q6UXD1 115 aa5.96□□□□□ -1.46
PHGDH-224ENST00000641711 WFDC13Q8IUB5 93 aa5.96□□□□□ -1.46
PHGDH-224ENST00000641711 TYMSOSQ8TAI1 123 aa5.96□□□□□ -1.46
PHGDH-224ENST00000641711 FAM236DA0A1B0GTK5 79 aa5.95□□□□□ -1.46
PHGDH-224ENST00000641711 FAM236CP0DP71 79 aa5.95□□□□□ -1.46
PHGDH-224ENST00000641711 ZCCHC13Q8WW36 166 aaKnown RBP5.95□□□□□ -1.46
PHGDH-224ENST00000641711 ATP5EP56381 51 aaPredicted RBP5.94□□□□□ -1.46
PHGDH-224ENST00000641711 KRTAP13-2Q52LG2 175 aa5.94□□□□□ -1.46
PHGDH-224ENST00000641711 A0A1B0GVX0 72 aa5.93□□□□□ -1.46
PHGDH-224ENST00000641711 Q5XG85 94 aa5.93□□□□□ -1.46
PHGDH-224ENST00000641711 TNXBP22105 4242 aa5.93□□□□□ -1.46
PHGDH-224ENST00000641711 SPAG11AQ6PDA7 123 aa5.92□□□□□ -1.46
PHGDH-224ENST00000641711 C8orf17Q9NRJ1 99 aa5.92□□□□□ -1.46
PHGDH-224ENST00000641711 hDV103S1A0JD37 113 aa5.91□□□□□ -1.46
PHGDH-224ENST00000641711 H3BPC8 53 aa5.91□□□□□ -1.46
PHGDH-224ENST00000641711 LINC00304Q8N9R0 145 aa5.91□□□□□ -1.46
PHGDH-224ENST00000641711 MP68P56378 58 aa5.9□□□□□ -1.46
PHGDH-224ENST00000641711 RPS29P62273 56 aaKnown RBP5.89□□□□□ -1.47
PHGDH-224ENST00000641711 TP53AIP1Q9HCN2 124 aa5.88□□□□□ -1.47
PHGDH-224ENST00000641711 SERP1Q9Y6X1 66 aa5.88□□□□□ -1.47
PHGDH-224ENST00000641711 IGHV6-1A0A0B4J1U7 121 aa5.87□□□□□ -1.47
PHGDH-224ENST00000641711 H0Y9P7 68 aa5.86□□□□□ -1.47
PHGDH-224ENST00000641711 SPINK1P00995 79 aa5.86□□□□□ -1.47
PHGDH-224ENST00000641711 C8orf87E5RJ46 101 aa5.85□□□□□ -1.47
PHGDH-224ENST00000641711 MRPL34Q9BQ48 92 aaKnown RBP5.85□□□□□ -1.47
PHGDH-224ENST00000641711 LIMD2Q9BT23 127 aa5.84□□□□□ -1.47
PHGDH-224ENST00000641711 TRAV22A0A0B4J277 110 aa5.83□□□□□ -1.48
PHGDH-224ENST00000641711 LINC00208Q96KT6 92 aa5.83□□□□□ -1.48
PHGDH-224ENST00000641711 C1orf195Q5TG92 126 aa5.82□□□□□ -1.48
PHGDH-224ENST00000641711 NOTCH2NLQ7Z3S9 236 aa5.82□□□□□ -1.48
PHGDH-224ENST00000641711 HERC1Q15751 4861 aa5.81□□□□□ -1.48
PHGDH-224ENST00000641711 C1orf64Q8NEQ6 169 aa5.8□□□□□ -1.48
PHGDH-224ENST00000641711 CYP4F30PQ9H0H9 118 aa5.8□□□□□ -1.48
PHGDH-224ENST00000641711 SPANXA2-OT1Q8N9U9 137 aa5.79□□□□□ -1.48
PHGDH-224ENST00000641711 FP248Q71RG6 208 aaPredicted RBP5.78□□□□□ -1.48
PHGDH-224ENST00000641711 LINC00313P59037 77 aa5.77□□□□□ -1.49
PHGDH-224ENST00000641711 SMIM26A0A096LP01 95 aa5.76□□□□□ -1.49
PHGDH-224ENST00000641711 NDUFS5O43920 106 aa5.76□□□□□ -1.49
PHGDH-224ENST00000641711 KRTAP13-3Q3SY46 172 aa5.75□□□□□ -1.49
PHGDH-224ENST00000641711 Q8N9P0 234 aaPredicted RBP5.75□□□□□ -1.49
PHGDH-224ENST00000641711 KRTAP16-1A8MUX0 517 aa5.73□□□□□ -1.49
PHGDH-224ENST00000641711 PRR4Q16378 134 aa5.73□□□□□ -1.49
PHGDH-224ENST00000641711 LOC101927531A0A1B0GV80 90 aa5.72□□□□□ -1.49
PHGDH-224ENST00000641711 IGLV7-46A0A075B6I9 117 aa5.71□□□□□ -1.5
PHGDH-224ENST00000641711 TPRXLQ17RH7 258 aa5.71□□□□□ -1.5
PHGDH-224ENST00000641711 Q5W150 140 aa5.71□□□□□ -1.5
PHGDH-224ENST00000641711 RETNLBQ9BQ08 111 aa5.69□□□□□ -1.5
PHGDH-224ENST00000641711 HMCN2Q8NDA2 5059 aa5.69□□□□□ -1.5
PHGDH-224ENST00000641711 PCOTHQ58A44 107 aa5.66□□□□□ -1.5
PHGDH-224ENST00000641711 IGKV2-30P06310 120 aa5.63□□□□□ -1.51
PHGDH-224ENST00000641711 C4orf26Q17RF5 130 aa5.63□□□□□ -1.51
PHGDH-224ENST00000641711 LRP2P98164 4655 aa5.61□□□□□ -1.51
PHGDH-224ENST00000641711 Q1T7F1 81 aa5.6□□□□□ -1.51
PHGDH-224ENST00000641711 COA5Q86WW8 74 aa5.59□□□□□ -1.51
PHGDH-224ENST00000641711 LOC100996750A0A140TA64 210 aa5.58□□□□□ -1.52
PHGDH-224ENST00000641711 H3BS24 57 aa5.58□□□□□ -1.52
PHGDH-224ENST00000641711 KRTAP4-6Q9BYQ5 205 aa5.58□□□□□ -1.52
PHGDH-224ENST00000641711 C20orf166-AS1Q96NR2 134 aa5.57□□□□□ -1.52
PHGDH-224ENST00000641711 V9GYY9 64 aa5.57□□□□□ -1.52
PHGDH-224ENST00000641711 A8MUU9 505 aa5.56□□□□□ -1.52
PHGDH-224ENST00000641711 HRES1P13985 223 aa5.56□□□□□ -1.52
PHGDH-224ENST00000641711 MPLKIPQ8TAP9 179 aa5.56□□□□□ -1.52
PHGDH-224ENST00000641711 XP32Q5T750 250 aa5.55□□□□□ -1.52
PHGDH-224ENST00000641711 DMAC1Q96GE9 116 aa5.54□□□□□ -1.52
PHGDH-224ENST00000641711 ACYP2P14621 99 aa5.52□□□□□ -1.53
PHGDH-224ENST00000641711 SEC61BP60468 96 aaKnown RBP5.52□□□□□ -1.53
PHGDH-224ENST00000641711 LPAP08519 4548 aa5.51□□□□□ -1.53
PHGDH-224ENST00000641711 IGKV2D-30A0A075B6S6 120 aa5.5□□□□□ -1.53
PHGDH-224ENST00000641711 C7orf65Q6ZTY9 151 aa5.5□□□□□ -1.53
PHGDH-224ENST00000641711 C9orf92A6NGG3 77 aa5.49□□□□□ -1.53
PHGDH-224ENST00000641711 Q75L30 129 aa5.49□□□□□ -1.53
PHGDH-224ENST00000641711 UBR4Q5T4S7 5183 aa5.47□□□□□ -1.53
PHGDH-224ENST00000641711 RPL37P61927 97 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms