RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 IGLV6-57P01721 117 aa5.72□□□□□ -1.49
PHGDH-212ENST00000641247 MPLKIPQ8TAP9 179 aa5.72□□□□□ -1.49
PHGDH-212ENST00000641247 FAM168BA1KXE4 195 aa5.71□□□□□ -1.5
PHGDH-212ENST00000641247 NKAPP1Q8N9T2 125 aa5.71□□□□□ -1.5
PHGDH-212ENST00000641247 ELOF1P60002 83 aaKnown RBP5.7□□□□□ -1.5
PHGDH-212ENST00000641247 KRTAP7-1Q8IUC3 87 aa5.7□□□□□ -1.5
PHGDH-212ENST00000641247 LIMD2Q9BT23 127 aa5.7□□□□□ -1.5
PHGDH-212ENST00000641247 CYP4F30PQ9H0H9 118 aa5.7□□□□□ -1.5
PHGDH-212ENST00000641247 hDV103S1A0JD37 113 aa5.69□□□□□ -1.5
PHGDH-212ENST00000641247 UBE2AP49459 152 aa5.69□□□□□ -1.5
PHGDH-212ENST00000641247 RETNLBQ9BQ08 111 aa5.69□□□□□ -1.5
PHGDH-212ENST00000641247 KRTAP4-1Q9BYQ7 146 aa5.69□□□□□ -1.5
PHGDH-212ENST00000641247 OCR1Q9BZK8 76 aa5.69□□□□□ -1.5
PHGDH-212ENST00000641247 H3BPC8 53 aa5.68□□□□□ -1.5
PHGDH-212ENST00000641247 Q6ZQY7 126 aa5.67□□□□□ -1.5
PHGDH-212ENST00000641247 A0A087X002 238 aa5.66□□□□□ -1.5
PHGDH-212ENST00000641247 KCNQ1DNQ9H478 68 aa5.66□□□□□ -1.5
PHGDH-212ENST00000641247 ETDCA0A1B0GVM5 59 aa5.65□□□□□ -1.5
PHGDH-212ENST00000641247 ZNF73O43830 326 aaPredicted RBP5.65□□□□□ -1.5
PHGDH-212ENST00000641247 RPL37AP8A6NKH3 93 aa5.64□□□□□ -1.51
PHGDH-212ENST00000641247 IGKV4-1P06312 121 aa5.64□□□□□ -1.51
PHGDH-212ENST00000641247 MP68P56378 58 aa5.64□□□□□ -1.51
PHGDH-212ENST00000641247 TPRXLQ17RH7 258 aa5.63□□□□□ -1.51
PHGDH-212ENST00000641247 ATP11AUNQ6ZP68 121 aa5.63□□□□□ -1.51
PHGDH-212ENST00000641247 SPRR1AP35321 89 aa5.62□□□□□ -1.51
PHGDH-212ENST00000641247 KTN1-AS1Q86SY8 53 aa5.62□□□□□ -1.51
PHGDH-212ENST00000641247 SPANXA2-OT1Q8N9U9 137 aa5.62□□□□□ -1.51
PHGDH-212ENST00000641247 KRTAP9-7A8MTY7 169 aa5.61□□□□□ -1.51
PHGDH-212ENST00000641247 LCE2CQ5TA81 110 aa5.61□□□□□ -1.51
PHGDH-212ENST00000641247 ANAPC11Q9NYG5 84 aa5.61□□□□□ -1.51
PHGDH-212ENST00000641247 IGLV7-46A0A075B6I9 117 aa5.6□□□□□ -1.51
PHGDH-212ENST00000641247 KRTAP4-16G5E9R7 235 aaPredicted RBP5.6□□□□□ -1.51
PHGDH-212ENST00000641247 C1orf64Q8NEQ6 169 aa5.6□□□□□ -1.51
PHGDH-212ENST00000641247 HIGD2AQ9BW72 106 aa5.6□□□□□ -1.51
PHGDH-212ENST00000641247 TRAV22A0A0B4J277 110 aa5.59□□□□□ -1.51
PHGDH-212ENST00000641247 HCG22E2RYF7 251 aa5.59□□□□□ -1.51
PHGDH-212ENST00000641247 ZNF861PO60384 105 aa5.59□□□□□ -1.51
PHGDH-212ENST00000641247 FAM229BQ4G0N7 80 aa5.58□□□□□ -1.52
PHGDH-212ENST00000641247 KRTAP13-2Q52LG2 175 aa5.58□□□□□ -1.52
PHGDH-212ENST00000641247 Q6ZRX8 168 aa5.58□□□□□ -1.52
PHGDH-212ENST00000641247 TYMSOSQ8TAI1 123 aa5.58□□□□□ -1.52
PHGDH-212ENST00000641247 ZCCHC13Q8WW36 166 aaKnown RBP5.58□□□□□ -1.52
PHGDH-212ENST00000641247 Q9BRP9 147 aa5.58□□□□□ -1.52
PHGDH-212ENST00000641247 DHRS4-AS1Q9P1J3 65 aa5.58□□□□□ -1.52
PHGDH-212ENST00000641247 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
PHGDH-212ENST00000641247 IGLV5-48A0A075B6I7 105 aa5.56□□□□□ -1.52
PHGDH-212ENST00000641247 KRTAP19-2Q3LHN2 52 aa5.55□□□□□ -1.52
PHGDH-212ENST00000641247 ASB16-AS1Q495Z4 193 aa5.55□□□□□ -1.52
PHGDH-212ENST00000641247 CHKB-CPT1BH3BT56 60 aa5.53□□□□□ -1.52
PHGDH-212ENST00000641247 MT1HP80294 61 aa5.53□□□□□ -1.52
PHGDH-212ENST00000641247 PRLHP81277 87 aa5.53□□□□□ -1.52
PHGDH-212ENST00000641247 PSPHP1O15172 72 aa5.52□□□□□ -1.53
PHGDH-212ENST00000641247 LORP23490 312 aaPredicted RBP5.52□□□□□ -1.53
PHGDH-212ENST00000641247 Q75L30 129 aa5.52□□□□□ -1.53
PHGDH-212ENST00000641247 SMIM29Q86T20 159 aa5.52□□□□□ -1.53
PHGDH-212ENST00000641247 LINC00208Q96KT6 92 aa5.52□□□□□ -1.53
PHGDH-212ENST00000641247 KRTAP13-1Q8IUC0 172 aa5.51□□□□□ -1.53
PHGDH-212ENST00000641247 LINC00304Q8N9R0 145 aa5.51□□□□□ -1.53
PHGDH-212ENST00000641247 LOC101927531A0A1B0GV80 90 aa5.5□□□□□ -1.53
PHGDH-212ENST00000641247 C7orf65Q6ZTY9 151 aa5.5□□□□□ -1.53
PHGDH-212ENST00000641247 Q8NBF4 154 aa5.5□□□□□ -1.53
PHGDH-212ENST00000641247 SPRR4Q96PI1 79 aa5.5□□□□□ -1.53
PHGDH-212ENST00000641247 KRTAP13-3Q3SY46 172 aa5.49□□□□□ -1.53
PHGDH-212ENST00000641247 CDC42SE1Q9NRR8 79 aa5.49□□□□□ -1.53
PHGDH-212ENST00000641247 A8MUN3 132 aa5.48□□□□□ -1.53
PHGDH-212ENST00000641247 KRTAP10-6P60371 365 aaPredicted RBP5.48□□□□□ -1.53
PHGDH-212ENST00000641247 Q5VV11 94 aa5.48□□□□□ -1.53
PHGDH-212ENST00000641247 LCA10Q71F78 164 aa5.48□□□□□ -1.53
PHGDH-212ENST00000641247 ST20-AS1Q8NBB2 130 aa5.48□□□□□ -1.53
PHGDH-212ENST00000641247 RBM12B-AS1Q9P1G2 102 aa5.48□□□□□ -1.53
PHGDH-212ENST00000641247 A6NED7 52 aa5.47□□□□□ -1.53
PHGDH-212ENST00000641247 Q8N377 158 aa5.47□□□□□ -1.53
PHGDH-212ENST00000641247 Q8N9P0 234 aaPredicted RBP5.47□□□□□ -1.53
PHGDH-212ENST00000641247 DEFB105AQ8NG35 78 aa5.47□□□□□ -1.53
PHGDH-212ENST00000641247 Q8N9L7 120 aa5.45□□□□□ -1.54
PHGDH-212ENST00000641247 PRR15LQ9BU68 103 aa5.45□□□□□ -1.54
PHGDH-212ENST00000641247 SPRR1BP22528 89 aa5.44□□□□□ -1.54
PHGDH-212ENST00000641247 SPTSSBQ8NFR3 76 aa5.44□□□□□ -1.54
PHGDH-212ENST00000641247 ZNF706Q9Y5V0 76 aaPredicted RBP5.44□□□□□ -1.54
PHGDH-212ENST00000641247 TP53AIP1Q9HCN2 124 aa5.43□□□□□ -1.54
PHGDH-212ENST00000641247 SEC61BP60468 96 aaKnown RBP5.42□□□□□ -1.54
PHGDH-212ENST00000641247 LINC01558Q9Y6Z2 57 aa5.42□□□□□ -1.54
PHGDH-212ENST00000641247 A6NN06 94 aa5.41□□□□□ -1.54
PHGDH-212ENST00000641247 DSCR10P59022 87 aa5.41□□□□□ -1.54
PHGDH-212ENST00000641247 LINC00483Q53H64 154 aa5.41□□□□□ -1.54
PHGDH-212ENST00000641247 H0Y9P7 68 aa5.4□□□□□ -1.54
PHGDH-212ENST00000641247 CASC2Q6XLA1 102 aa5.4□□□□□ -1.54
PHGDH-212ENST00000641247 A0A1W2PNM2 257 aa5.39□□□□□ -1.55
PHGDH-212ENST00000641247 C4orf48Q5BLP8 95 aa5.39□□□□□ -1.55
PHGDH-212ENST00000641247 SSPOA2VEC9 5147 aa5.39□□□□□ -1.55
PHGDH-212ENST00000641247 IGLV8-61A0A075B6I0 122 aa5.37□□□□□ -1.55
PHGDH-212ENST00000641247 K7EQZ3 153 aa5.37□□□□□ -1.55
PHGDH-212ENST00000641247 XP32Q5T750 250 aa5.36□□□□□ -1.55
PHGDH-212ENST00000641247 COA5Q86WW8 74 aa5.36□□□□□ -1.55
PHGDH-212ENST00000641247 USH2AO75445 5202 aa5.36□□□□□ -1.55
PHGDH-212ENST00000641247 IGLV9-49A0A0B4J1Y8 123 aa5.33□□□□□ -1.56
PHGDH-212ENST00000641247 A8MWP4 228 aa5.33□□□□□ -1.56
PHGDH-212ENST00000641247 SPAG11AQ6PDA7 123 aa5.33□□□□□ -1.56
PHGDH-212ENST00000641247 IGFL1Q6UW32 110 aa5.33□□□□□ -1.56
PHGDH-212ENST00000641247 MOBPQ13875 183 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms