RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 C20orf166-AS1Q96NR2 134 aa11.48□□□□□ -0.57
SCN1B-206ENST00000638536 H3BT86 120 aa11.47□□□□□ -0.57
SCN1B-206ENST00000638536 LCE2CQ5TA81 110 aa11.47□□□□□ -0.57
SCN1B-206ENST00000638536 A8MUU9 505 aa11.46□□□□□ -0.57
SCN1B-206ENST00000638536 KRTAP16-1A8MUX0 517 aa11.46□□□□□ -0.58
SCN1B-206ENST00000638536 LINC00313P59037 77 aa11.46□□□□□ -0.58
SCN1B-206ENST00000638536 IGHV6-1A0A0B4J1U7 121 aa11.44□□□□□ -0.58
SCN1B-206ENST00000638536 J3QR89 54 aa11.44□□□□□ -0.58
SCN1B-206ENST00000638536 PDE6GP18545 87 aa11.43□□□□□ -0.58
SCN1B-206ENST00000638536 ATP11AUNQ6ZP68 121 aa11.43□□□□□ -0.58
SCN1B-206ENST00000638536 SMCPP49901 116 aaPredicted RBP11.42□□□□□ -0.58
SCN1B-206ENST00000638536 PRO0461Q9UI25 63 aa11.4□□□□□ -0.58
SCN1B-206ENST00000638536 C21orf62-AS1Q17RA5 79 aa11.39□□□□□ -0.59
SCN1B-206ENST00000638536 A0A1B0GVX0 72 aa11.38□□□□□ -0.59
SCN1B-206ENST00000638536 A0A1B0GW54 56 aa11.38□□□□□ -0.59
SCN1B-206ENST00000638536 J3KT08 172 aa11.35□□□□□ -0.59
SCN1B-206ENST00000638536 ETDBQ3ZM63 59 aa11.33□□□□□ -0.6
SCN1B-206ENST00000638536 PCP4P48539 62 aa11.32□□□□□ -0.6
SCN1B-206ENST00000638536 FLGP20930 4061 aaPredicted RBP11.31□□□□□ -0.6
SCN1B-206ENST00000638536 C8orf87E5RJ46 101 aa11.3□□□□□ -0.6
SCN1B-206ENST00000638536 NREPQ16612 68 aa11.29□□□□□ -0.6
SCN1B-206ENST00000638536 IGKV3D-7A0A0C4DH55 119 aa11.28□□□□□ -0.6
SCN1B-206ENST00000638536 MT1HP80294 61 aa11.27□□□□□ -0.6
SCN1B-206ENST00000638536 A8MWP4 228 aa11.27□□□□□ -0.61
SCN1B-206ENST00000638536 NDUFB1O75438 58 aa11.24□□□□□ -0.61
SCN1B-206ENST00000638536 C8orf17Q9NRJ1 99 aa11.22□□□□□ -0.61
SCN1B-206ENST00000638536 PRR15Q8IV56 129 aa11.2□□□□□ -0.62
SCN1B-206ENST00000638536 COX6B2Q6YFQ2 88 aa11.19□□□□□ -0.62
SCN1B-206ENST00000638536 SCGB1A1P11684 91 aa11.18□□□□□ -0.62
SCN1B-206ENST00000638536 K7EQZ3 153 aa11.16□□□□□ -0.62
SCN1B-206ENST00000638536 Q6ZVQ6 151 aa11.16□□□□□ -0.62
SCN1B-206ENST00000638536 Q8N9P0 234 aaPredicted RBP11.16□□□□□ -0.62
SCN1B-206ENST00000638536 MMP24-AS1A0A0U1RRL7 71 aa11.13□□□□□ -0.63
SCN1B-206ENST00000638536 LINC00846Q9NV44 126 aa11.11□□□□□ -0.63
SCN1B-206ENST00000638536 BPY2O14599 106 aa11.1□□□□□ -0.63
SCN1B-206ENST00000638536 ZCCHC13Q8WW36 166 aaKnown RBP11.1□□□□□ -0.63
SCN1B-206ENST00000638536 Q8N9L7 120 aa11.08□□□□□ -0.64
SCN1B-206ENST00000638536 HRES1P13985 223 aa11.06□□□□□ -0.64
SCN1B-206ENST00000638536 KRTAP9-2Q9BYQ4 174 aa11.05□□□□□ -0.64
SCN1B-206ENST00000638536 TMEM254Q8TBM7 123 aa11.03□□□□□ -0.64
SCN1B-206ENST00000638536 MRPL34Q9BQ48 92 aaKnown RBP11.03□□□□□ -0.64
SCN1B-206ENST00000638536 hDV103S1A0JD37 113 aa11.02□□□□□ -0.65
SCN1B-206ENST00000638536 M0R2T5 61 aa11.02□□□□□ -0.65
SCN1B-206ENST00000638536 MPLKIPQ8TAP9 179 aa11.02□□□□□ -0.65
SCN1B-206ENST00000638536 FAM240AA0A1B0GVK7 77 aa11.01□□□□□ -0.65
SCN1B-206ENST00000638536 KRTAP10-6P60371 365 aaPredicted RBP11.01□□□□□ -0.65
SCN1B-206ENST00000638536 LORP23490 312 aaPredicted RBP10.99□□□□□ -0.65
SCN1B-206ENST00000638536 UBL5Q9BZL1 73 aa10.98□□□□□ -0.65
SCN1B-206ENST00000638536 SPINK7P58062 85 aa10.97□□□□□ -0.65
SCN1B-206ENST00000638536 WFDC13Q8IUB5 93 aa10.96□□□□□ -0.65
SCN1B-206ENST00000638536 ACYP1P07311 99 aa10.95□□□□□ -0.66
SCN1B-206ENST00000638536 NDUFS5O43920 106 aa10.92□□□□□ -0.66
SCN1B-206ENST00000638536 MT-ATP8P03928 68 aa10.92□□□□□ -0.66
SCN1B-206ENST00000638536 FAM236DA0A1B0GTK5 79 aa10.9□□□□□ -0.66
SCN1B-206ENST00000638536 FAM236CP0DP71 79 aa10.9□□□□□ -0.66
SCN1B-206ENST00000638536 CASC2Q6XLA1 102 aa10.9□□□□□ -0.66
SCN1B-206ENST00000638536 RBM12B-AS1Q9P1G2 102 aa10.89□□□□□ -0.67
SCN1B-206ENST00000638536 Q5W150 140 aa10.87□□□□□ -0.67
SCN1B-206ENST00000638536 HCG22E2RYF7 251 aa10.83□□□□□ -0.68
SCN1B-206ENST00000638536 LCE2DQ5TA82 110 aaPredicted RBP10.83□□□□□ -0.68
SCN1B-206ENST00000638536 CXCL6P80162 114 aa10.78□□□□□ -0.68
SCN1B-206ENST00000638536 IMUPQ9GZP8 106 aa10.78□□□□□ -0.68
SCN1B-206ENST00000638536 LINC00643Q86TS7 51 aa10.77□□□□□ -0.68
SCN1B-206ENST00000638536 IGKV2D-30A0A075B6S6 120 aa10.73□□□□□ -0.69
SCN1B-206ENST00000638536 IGKV2-30P06310 120 aa10.73□□□□□ -0.69
SCN1B-206ENST00000638536 KRTAP9-8Q9BYQ0 159 aa10.73□□□□□ -0.69
SCN1B-206ENST00000638536 FSIP2Q5CZC0 6907 aa10.72□□□□□ -0.69
SCN1B-206ENST00000638536 ANAPC13Q9BS18 74 aa10.71□□□□□ -0.69
SCN1B-206ENST00000638536 C7orf65Q6ZTY9 151 aa10.66□□□□□ -0.7
SCN1B-206ENST00000638536 MT2AP02795 61 aa10.58□□□□□ -0.72
SCN1B-206ENST00000638536 ATP5EP2Q5VTU8 51 aa10.57□□□□□ -0.72
SCN1B-206ENST00000638536 KRTAP9-6A0A140TA67 174 aa10.56□□□□□ -0.72
SCN1B-206ENST00000638536 TP53AIP1Q9HCN2 124 aa10.55□□□□□ -0.72
SCN1B-206ENST00000638536 C4orf26Q17RF5 130 aa10.55□□□□□ -0.72
SCN1B-206ENST00000638536 HIST1H4AP62805 103 aaKnown RBP10.54□□□□□ -0.72
SCN1B-206ENST00000638536 FAM236AA0A1B0GUQ0 79 aa10.52□□□□□ -0.73
SCN1B-206ENST00000638536 FAM236BA0A1B0GV22 79 aa10.52□□□□□ -0.73
SCN1B-206ENST00000638536 H1FX-AS1Q4G0G2 97 aa10.52□□□□□ -0.73
SCN1B-206ENST00000638536 MT1FP04733 61 aa10.51□□□□□ -0.73
SCN1B-206ENST00000638536 A0A087WVE0 104 aa10.49□□□□□ -0.73
SCN1B-206ENST00000638536 ATOX1O00244 68 aa10.47□□□□□ -0.73
SCN1B-206ENST00000638536 CRCT1Q9UGL9 99 aa10.46□□□□□ -0.74
SCN1B-206ENST00000638536 KRTAP3-1Q9BYR8 98 aa10.45□□□□□ -0.74
SCN1B-206ENST00000638536 USH2AO75445 5202 aa10.42□□□□□ -0.74
SCN1B-206ENST00000638536 CCDC179H3BU77 68 aa10.42□□□□□ -0.74
SCN1B-206ENST00000638536 KRTAP10-10P60014 251 aa10.42□□□□□ -0.74
SCN1B-206ENST00000638536 UQCRQO14949 82 aa10.4□□□□□ -0.74
SCN1B-206ENST00000638536 TRAV22A0A0B4J277 110 aa10.38□□□□□ -0.75
SCN1B-206ENST00000638536 KRTAP9-3Q9BYQ3 159 aa10.37□□□□□ -0.75
SCN1B-206ENST00000638536 CYP4F30PQ9H0H9 118 aa10.37□□□□□ -0.75
SCN1B-206ENST00000638536 COX7CP15954 63 aa10.36□□□□□ -0.75
SCN1B-206ENST00000638536 C1orf64Q8NEQ6 169 aa10.35□□□□□ -0.75
SCN1B-206ENST00000638536 SERP2Q8N6R1 65 aa10.32□□□□□ -0.76
SCN1B-206ENST00000638536 LCE2BO14633 110 aa10.3□□□□□ -0.76
SCN1B-206ENST00000638536 SSPOA2VEC9 5147 aa10.29□□□□□ -0.76
SCN1B-206ENST00000638536 LOC101927531A0A1B0GV80 90 aa10.29□□□□□ -0.76
SCN1B-206ENST00000638536 H0Y9P7 68 aa10.29□□□□□ -0.76
SCN1B-206ENST00000638536 SMIM20Q8N5G0 67 aa10.25□□□□□ -0.77
SCN1B-206ENST00000638536 OCR1Q9BZK8 76 aa10.24□□□□□ -0.77
SCN1B-206ENST00000638536 C5orf47Q569G3 176 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms