RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 A0A1B0GVY2 172 aa9.63□□□□□ -0.87
CTSD-213ENST00000637915 H0Y9P7 68 aa9.63□□□□□ -0.87
CTSD-213ENST00000637915 LINC00208Q96KT6 92 aa9.61□□□□□ -0.87
CTSD-213ENST00000637915 NOTCH2NLQ7Z3S9 236 aa9.61□□□□□ -0.87
CTSD-213ENST00000637915 RYR2Q92736 4967 aa9.6□□□□□ -0.87
CTSD-213ENST00000637915 H3BPC8 53 aa9.58□□□□□ -0.88
CTSD-213ENST00000637915 TRAV22A0A0B4J277 110 aa9.57□□□□□ -0.88
CTSD-213ENST00000637915 PLA2G1BP04054 148 aaKnown RBP9.57□□□□□ -0.88
CTSD-213ENST00000637915 Q5XG85 94 aa9.57□□□□□ -0.88
CTSD-213ENST00000637915 MRPL34Q9BQ48 92 aaKnown RBP9.57□□□□□ -0.88
CTSD-213ENST00000637915 TP53AIP1Q9HCN2 124 aa9.57□□□□□ -0.88
CTSD-213ENST00000637915 KMT2CQ8NEZ4 4911 aaKnown RBP9.55□□□□□ -0.88
CTSD-213ENST00000637915 APOBP04114 4563 aaKnown RBP9.55□□□□□ -0.88
CTSD-213ENST00000637915 C1orf64Q8NEQ6 169 aa9.54□□□□□ -0.88
CTSD-213ENST00000637915 NDUFS5O43920 106 aa9.53□□□□□ -0.88
CTSD-213ENST00000637915 SMR3BP02814 79 aaPredicted RBP9.52□□□□□ -0.89
CTSD-213ENST00000637915 C1orf195Q5TG92 126 aa9.52□□□□□ -0.89
CTSD-213ENST00000637915 SMIM26A0A096LP01 95 aa9.52□□□□□ -0.89
CTSD-213ENST00000637915 TYMSOSQ8TAI1 123 aa9.5□□□□□ -0.89
CTSD-213ENST00000637915 LIMD2Q9BT23 127 aa9.5□□□□□ -0.89
CTSD-213ENST00000637915 C8orf87E5RJ46 101 aa9.48□□□□□ -0.89
CTSD-213ENST00000637915 C4orf26Q17RF5 130 aa9.48□□□□□ -0.89
CTSD-213ENST00000637915 FAT1Q14517 4588 aa9.48□□□□□ -0.89
CTSD-213ENST00000637915 PRR4Q16378 134 aa9.46□□□□□ -0.9
CTSD-213ENST00000637915 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.9
CTSD-213ENST00000637915 CYP4F30PQ9H0H9 118 aa9.46□□□□□ -0.9
CTSD-213ENST00000637915 KRTAP10-4P60372 401 aaPredicted RBP9.44□□□□□ -0.9
CTSD-213ENST00000637915 PRR26Q8N8Z3 221 aa9.44□□□□□ -0.9
CTSD-213ENST00000637915 FP248Q71RG6 208 aaPredicted RBP9.44□□□□□ -0.9
CTSD-213ENST00000637915 SPINK1P00995 79 aa9.43□□□□□ -0.9
CTSD-213ENST00000637915 LINC00313P59037 77 aa9.43□□□□□ -0.9
CTSD-213ENST00000637915 SPANXA2-OT1Q8N9U9 137 aa9.43□□□□□ -0.9
CTSD-213ENST00000637915 Q5W150 140 aa9.39□□□□□ -0.91
CTSD-213ENST00000637915 KRTAP13-3Q3SY46 172 aa9.39□□□□□ -0.91
CTSD-213ENST00000637915 LINC00304Q8N9R0 145 aa9.39□□□□□ -0.91
CTSD-213ENST00000637915 PCOTHQ58A44 107 aa9.37□□□□□ -0.91
CTSD-213ENST00000637915 Q8N9P0 234 aaPredicted RBP9.36□□□□□ -0.91
CTSD-213ENST00000637915 KRTAP16-1A8MUX0 517 aa9.35□□□□□ -0.91
CTSD-213ENST00000637915 RPS29P62273 56 aaKnown RBP9.35□□□□□ -0.91
CTSD-213ENST00000637915 SPAG11AQ6PDA7 123 aa9.34□□□□□ -0.91
CTSD-213ENST00000637915 IGLV7-46A0A075B6I9 117 aa9.33□□□□□ -0.92
CTSD-213ENST00000637915 RYR3Q15413 4870 aa9.33□□□□□ -0.92
CTSD-213ENST00000637915 LOC101927531A0A1B0GV80 90 aa9.32□□□□□ -0.92
CTSD-213ENST00000637915 PKHD1L1Q86WI1 4243 aa9.32□□□□□ -0.92
CTSD-213ENST00000637915 FAM229AH3BQW9 127 aa9.29□□□□□ -0.92
CTSD-213ENST00000637915 MPLKIPQ8TAP9 179 aa9.27□□□□□ -0.93
CTSD-213ENST00000637915 RETNLBQ9BQ08 111 aa9.24□□□□□ -0.93
CTSD-213ENST00000637915 Q1T7F1 81 aa9.21□□□□□ -0.93
CTSD-213ENST00000637915 HSPG2P98160 4391 aa9.21□□□□□ -0.94
CTSD-213ENST00000637915 COA5Q86WW8 74 aa9.2□□□□□ -0.94
CTSD-213ENST00000637915 IGKV2-30P06310 120 aa9.18□□□□□ -0.94
CTSD-213ENST00000637915 PRO0628Q9UI54 55 aa9.16□□□□□ -0.94
CTSD-213ENST00000637915 Q5VSD8 79 aa9.15□□□□□ -0.95
CTSD-213ENST00000637915 HRES1P13985 223 aa9.13□□□□□ -0.95
CTSD-213ENST00000637915 LRP1Q07954 4544 aaKnown RBP9.12□□□□□ -0.95
CTSD-213ENST00000637915 V9GYY9 64 aa9.12□□□□□ -0.95
CTSD-213ENST00000637915 RYR1P21817 5038 aa9.11□□□□□ -0.95
CTSD-213ENST00000637915 TNXBP22105 4242 aa9.09□□□□□ -0.95
CTSD-213ENST00000637915 IGKV2D-30A0A075B6S6 120 aa9.09□□□□□ -0.95
CTSD-213ENST00000637915 C9orf92A6NGG3 77 aa9.09□□□□□ -0.95
CTSD-213ENST00000637915 Q8N1X5 172 aa9.07□□□□□ -0.96
CTSD-213ENST00000637915 KRTAP10-8P60410 259 aa9.06□□□□□ -0.96
CTSD-213ENST00000637915 DMAC1Q96GE9 116 aa9.06□□□□□ -0.96
CTSD-213ENST00000637915 FAT3Q8TDW7 4589 aa9.05□□□□□ -0.96
CTSD-213ENST00000637915 BRK1Q8WUW1 75 aa9.05□□□□□ -0.96
CTSD-213ENST00000637915 FLG2Q5D862 2391 aaPredicted RBP9.05□□□□□ -0.96
CTSD-213ENST00000637915 PSPHP1O15172 72 aa9.04□□□□□ -0.96
CTSD-213ENST00000637915 C20orf166-AS1Q96NR2 134 aa9.04□□□□□ -0.96
CTSD-213ENST00000637915 KRTAP17-1Q9BYP8 105 aa9.04□□□□□ -0.96
CTSD-213ENST00000637915 A8MUU9 505 aa9.03□□□□□ -0.96
CTSD-213ENST00000637915 ACYP2P14621 99 aa9.03□□□□□ -0.96
CTSD-213ENST00000637915 EPPK1P58107 5090 aaKnown RBP9.02□□□□□ -0.97
CTSD-213ENST00000637915 A8MUN3 132 aa9□□□□□ -0.97
CTSD-213ENST00000637915 KIAA1109Q2LD37 5005 aa9□□□□□ -0.97
CTSD-213ENST00000637915 C7orf65Q6ZTY9 151 aa8.99□□□□□ -0.97
CTSD-213ENST00000637915 Q5VV11 94 aa8.95□□□□□ -0.98
CTSD-213ENST00000637915 PRR15LQ9BU68 103 aa8.94□□□□□ -0.98
CTSD-213ENST00000637915 LINC01558Q9Y6Z2 57 aa8.92□□□□□ -0.98
CTSD-213ENST00000637915 CHKB-CPT1BH3BT56 60 aa8.91□□□□□ -0.98
CTSD-213ENST00000637915 MYCBP2O75592 4640 aa8.9□□□□□ -0.98
CTSD-213ENST00000637915 Q75L30 129 aa8.89□□□□□ -0.99
CTSD-213ENST00000637915 MT1HL1P0DM35 61 aa8.86□□□□□ -0.99
CTSD-213ENST00000637915 SPINK7P58062 85 aa8.81□□□□□ -1
CTSD-213ENST00000637915 DMBT1Q9UGM3 2413 aaPredicted RBP8.8□□□□□ -1
CTSD-213ENST00000637915 RPL37P61927 97 aaKnown RBP8.74□□□□□ -1.01
CTSD-213ENST00000637915 XP32Q5T750 250 aa8.74□□□□□ -1.01
CTSD-213ENST00000637915 ATP11AUNQ6ZP68 121 aa8.74□□□□□ -1.01
CTSD-213ENST00000637915 A6NED7 52 aa8.73□□□□□ -1.01
CTSD-213ENST00000637915 KRTAP3-1Q9BYR8 98 aa8.73□□□□□ -1.01
CTSD-213ENST00000637915 A8MU10 97 aa8.72□□□□□ -1.01
CTSD-213ENST00000637915 KRTAP4-5Q9BYR2 181 aa8.68□□□□□ -1.02
CTSD-213ENST00000637915 LCA10Q71F78 164 aa8.68□□□□□ -1.02
CTSD-213ENST00000637915 BIRC6Q9NR09 4857 aa8.67□□□□□ -1.02
CTSD-213ENST00000637915 A0A1B0GU69 56 aa8.67□□□□□ -1.02
CTSD-213ENST00000637915 CDC42SE1Q9NRR8 79 aa8.65□□□□□ -1.02
CTSD-213ENST00000637915 COX6B2Q6YFQ2 88 aa8.64□□□□□ -1.03
CTSD-213ENST00000637915 SPTSSBQ8NFR3 76 aa8.59□□□□□ -1.03
CTSD-213ENST00000637915 PMAIP1Q13794 54 aa8.57□□□□□ -1.04
CTSD-213ENST00000637915 TPRXLQ17RH7 258 aa8.57□□□□□ -1.04
CTSD-213ENST00000637915 HERC2O95714 4834 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms