RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, humanhuman

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-208ENST00000626716 TRBV7-4A0A0J9YYF1 115 aa12.86□□□□□ -0.35
R3HDM4-208ENST00000626716 A0A1W2PNM2 257 aa12.86□□□□□ -0.35
R3HDM4-208ENST00000626716 JMJD7-PLA2G4BH0Y9G9 81 aa12.85□□□□□ -0.35
R3HDM4-208ENST00000626716 DSCR8Q96T75 97 aa12.84□□□□□ -0.35
R3HDM4-208ENST00000626716 USH2AO75445 5202 aa12.83□□□□□ -0.36
R3HDM4-208ENST00000626716 A0A087WSZ3 146 aa12.83□□□□□ -0.36
R3HDM4-208ENST00000626716 CCKP06307 115 aa12.81□□□□□ -0.36
R3HDM4-208ENST00000626716 C14orf132Q9NPU4 83 aa12.8□□□□□ -0.36
R3HDM4-208ENST00000626716 SSPOA2VEC9 5147 aa12.79□□□□□ -0.36
R3HDM4-208ENST00000626716 A0A1B0GV90 55 aa12.78□□□□□ -0.36
R3HDM4-208ENST00000626716 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.78□□□□□ -0.36
R3HDM4-208ENST00000626716 DSCR10P59022 87 aa12.78□□□□□ -0.36
R3HDM4-208ENST00000626716 VPS25Q9BRG1 176 aa12.78□□□□□ -0.36
R3HDM4-208ENST00000626716 LOC110117498A0A087WWA1 95 aa12.77□□□□□ -0.37
R3HDM4-208ENST00000626716 Q6ZQT0 140 aa12.76□□□□□ -0.37
R3HDM4-208ENST00000626716 KRTAP9-7A8MTY7 169 aa12.75□□□□□ -0.37
R3HDM4-208ENST00000626716 F8W1H4 67 aa12.73□□□□□ -0.37
R3HDM4-208ENST00000626716 PDE6GP18545 87 aa12.71□□□□□ -0.37
R3HDM4-208ENST00000626716 KRTAP16-1A8MUX0 517 aa12.7□□□□□ -0.38
R3HDM4-208ENST00000626716 LINC00313P59037 77 aa12.7□□□□□ -0.38
R3HDM4-208ENST00000626716 SIGMAR1Q99720 223 aa12.7□□□□□ -0.38
R3HDM4-208ENST00000626716 FAM236DA0A1B0GTK5 79 aa12.67□□□□□ -0.38
R3HDM4-208ENST00000626716 FAM236CP0DP71 79 aa12.67□□□□□ -0.38
R3HDM4-208ENST00000626716 MT2AP02795 61 aa12.65□□□□□ -0.38
R3HDM4-208ENST00000626716 IGKV4-1P06312 121 aa12.63□□□□□ -0.39
R3HDM4-208ENST00000626716 ETDBQ3ZM63 59 aa12.63□□□□□ -0.39
R3HDM4-208ENST00000626716 C21orf62-AS1Q17RA5 79 aa12.61□□□□□ -0.39
R3HDM4-208ENST00000626716 RBM12B-AS1Q9P1G2 102 aa12.6□□□□□ -0.39
R3HDM4-208ENST00000626716 MPLKIPQ8TAP9 179 aa12.59□□□□□ -0.39
R3HDM4-208ENST00000626716 FCGBPQ9Y6R7 5405 aaPredicted RBP12.57□□□□□ -0.4
R3HDM4-208ENST00000626716 A0A1B0GW54 56 aa12.57□□□□□ -0.4
R3HDM4-208ENST00000626716 HRES1P13985 223 aa12.57□□□□□ -0.4
R3HDM4-208ENST00000626716 NOTCH2NLQ7Z3S9 236 aa12.57□□□□□ -0.4
R3HDM4-208ENST00000626716 MT1FP04733 61 aa12.55□□□□□ -0.4
R3HDM4-208ENST00000626716 LINC00472Q9H8W2 130 aa12.54□□□□□ -0.4
R3HDM4-208ENST00000626716 LCE2BO14633 110 aa12.53□□□□□ -0.4
R3HDM4-208ENST00000626716 DEFB116Q30KQ4 102 aa12.53□□□□□ -0.4
R3HDM4-208ENST00000626716 KRTAP10-10P60014 251 aa12.51□□□□□ -0.41
R3HDM4-208ENST00000626716 KRTAP9-3Q9BYQ3 159 aa12.51□□□□□ -0.41
R3HDM4-208ENST00000626716 KRTAP19-1Q8IUB9 90 aa12.49□□□□□ -0.41
R3HDM4-208ENST00000626716 IGHV6-1A0A0B4J1U7 121 aa12.48□□□□□ -0.41
R3HDM4-208ENST00000626716 NREPQ16612 68 aa12.45□□□□□ -0.42
R3HDM4-208ENST00000626716 J3KT08 172 aa12.39□□□□□ -0.43
R3HDM4-208ENST00000626716 LINC00846Q9NV44 126 aa12.39□□□□□ -0.43
R3HDM4-208ENST00000626716 C8orf87E5RJ46 101 aa12.38□□□□□ -0.43
R3HDM4-208ENST00000626716 Q6ZVQ6 151 aa12.37□□□□□ -0.43
R3HDM4-208ENST00000626716 A0A1B0GVX0 72 aa12.36□□□□□ -0.43
R3HDM4-208ENST00000626716 UBL5Q9BZL1 73 aa12.32□□□□□ -0.44
R3HDM4-208ENST00000626716 ZCCHC13Q8WW36 166 aaKnown RBP12.31□□□□□ -0.44
R3HDM4-208ENST00000626716 A8MWP4 228 aa12.29□□□□□ -0.44
R3HDM4-208ENST00000626716 SPINK7P58062 85 aa12.29□□□□□ -0.44
R3HDM4-208ENST00000626716 BPY2O14599 106 aa12.28□□□□□ -0.44
R3HDM4-208ENST00000626716 IGKV3D-7A0A0C4DH55 119 aa12.27□□□□□ -0.45
R3HDM4-208ENST00000626716 NDUFB1O75438 58 aa12.27□□□□□ -0.45
R3HDM4-208ENST00000626716 FAM240AA0A1B0GVK7 77 aa12.26□□□□□ -0.45
R3HDM4-208ENST00000626716 ACYP1P07311 99 aa12.25□□□□□ -0.45
R3HDM4-208ENST00000626716 K7EQZ3 153 aa12.21□□□□□ -0.45
R3HDM4-208ENST00000626716 PRR15Q8IV56 129 aa12.21□□□□□ -0.45
R3HDM4-208ENST00000626716 MACF1Q9UPN3 7388 aaKnown RBP12.21□□□□□ -0.46
R3HDM4-208ENST00000626716 Q8N9P0 234 aaPredicted RBP12.18□□□□□ -0.46
R3HDM4-208ENST00000626716 C8orf17Q9NRJ1 99 aa12.18□□□□□ -0.46
R3HDM4-208ENST00000626716 Q8N9L7 120 aa12.17□□□□□ -0.46
R3HDM4-208ENST00000626716 KRTAP19-6Q3LI70 58 aa12.16□□□□□ -0.46
R3HDM4-208ENST00000626716 SYNE2Q8WXH0 6885 aaKnown RBP12.14□□□□□ -0.47
R3HDM4-208ENST00000626716 J3QR89 54 aa12.14□□□□□ -0.47
R3HDM4-208ENST00000626716 WFDC13Q8IUB5 93 aa12.12□□□□□ -0.47
R3HDM4-208ENST00000626716 MMP24-AS1A0A0U1RRL7 71 aa12.11□□□□□ -0.47
R3HDM4-208ENST00000626716 CXCL6P80162 114 aa12.1□□□□□ -0.47
R3HDM4-208ENST00000626716 hDV103S1A0JD37 113 aa12.02□□□□□ -0.49
R3HDM4-208ENST00000626716 ATP5EP2Q5VTU8 51 aa12.02□□□□□ -0.49
R3HDM4-208ENST00000626716 TMEM254Q8TBM7 123 aa12.02□□□□□ -0.49
R3HDM4-208ENST00000626716 LINC00643Q86TS7 51 aa12.01□□□□□ -0.49
R3HDM4-208ENST00000626716 MRPL34Q9BQ48 92 aaKnown RBP11.98□□□□□ -0.49
R3HDM4-208ENST00000626716 K7ERU9 68 aa11.97□□□□□ -0.49
R3HDM4-208ENST00000626716 CASC2Q6XLA1 102 aa11.97□□□□□ -0.49
R3HDM4-208ENST00000626716 HCG22E2RYF7 251 aa11.96□□□□□ -0.49
R3HDM4-208ENST00000626716 H1FX-AS1Q4G0G2 97 aa11.91□□□□□ -0.5
R3HDM4-208ENST00000626716 NDUFS5O43920 106 aa11.89□□□□□ -0.51
R3HDM4-208ENST00000626716 HIST1H4AP62805 103 aaKnown RBP11.89□□□□□ -0.51
R3HDM4-208ENST00000626716 KRTAP6-3Q3LI67 103 aa11.84□□□□□ -0.51
R3HDM4-208ENST00000626716 A0A087WVE0 104 aa11.81□□□□□ -0.52
R3HDM4-208ENST00000626716 MT-ATP8P03928 68 aa11.73□□□□□ -0.53
R3HDM4-208ENST00000626716 Q5W150 140 aa11.73□□□□□ -0.53
R3HDM4-208ENST00000626716 IGKV2D-30A0A075B6S6 120 aa11.71□□□□□ -0.53
R3HDM4-208ENST00000626716 IGKV2-30P06310 120 aa11.71□□□□□ -0.53
R3HDM4-208ENST00000626716 C7orf65Q6ZTY9 151 aa11.66□□□□□ -0.54
R3HDM4-208ENST00000626716 TP53AIP1Q9HCN2 124 aa11.66□□□□□ -0.54
R3HDM4-208ENST00000626716 IMUPQ9GZP8 106 aa11.63□□□□□ -0.55
R3HDM4-208ENST00000626716 C4orf26Q17RF5 130 aa11.56□□□□□ -0.56
R3HDM4-208ENST00000626716 UQCRQO14949 82 aa11.53□□□□□ -0.56
R3HDM4-208ENST00000626716 TRAV22A0A0B4J277 110 aa11.5□□□□□ -0.57
R3HDM4-208ENST00000626716 OCR1Q9BZK8 76 aa11.5□□□□□ -0.57
R3HDM4-208ENST00000626716 C5orf47Q569G3 176 aa11.49□□□□□ -0.57
R3HDM4-208ENST00000626716 SCGB1A1P11684 91 aa11.48□□□□□ -0.57
R3HDM4-208ENST00000626716 FAM236AA0A1B0GUQ0 79 aa11.47□□□□□ -0.57
R3HDM4-208ENST00000626716 FAM236BA0A1B0GV22 79 aa11.47□□□□□ -0.57
R3HDM4-208ENST00000626716 A6NN06 94 aa11.47□□□□□ -0.57
R3HDM4-208ENST00000626716 H0Y9P7 68 aa11.44□□□□□ -0.58
R3HDM4-208ENST00000626716 NEBP20929 6669 aa11.44□□□□□ -0.58
R3HDM4-208ENST00000626716 MT1BP07438 61 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms