RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 IGKV4-1P06312 121 aa12.47□□□□□ -0.41
CBWD3-213ENST00000618217 CXCL6P80162 114 aa12.43□□□□□ -0.42
CBWD3-213ENST00000618217 C9orf92A6NGG3 77 aa12.42□□□□□ -0.42
CBWD3-213ENST00000618217 BPY2O14599 106 aa12.42□□□□□ -0.42
CBWD3-213ENST00000618217 IMUPQ9GZP8 106 aa12.42□□□□□ -0.42
CBWD3-213ENST00000618217 J3KT08 172 aa12.4□□□□□ -0.42
CBWD3-213ENST00000618217 HIST1H4AP62805 103 aaKnown RBP12.39□□□□□ -0.43
CBWD3-213ENST00000618217 XP32Q5T750 250 aa12.38□□□□□ -0.43
CBWD3-213ENST00000618217 SCGB1A1P11684 91 aa12.34□□□□□ -0.43
CBWD3-213ENST00000618217 A0A087WVE0 104 aa12.33□□□□□ -0.43
CBWD3-213ENST00000618217 UBR4Q5T4S7 5183 aa12.32□□□□□ -0.44
CBWD3-213ENST00000618217 Q8N9L7 120 aa12.32□□□□□ -0.44
CBWD3-213ENST00000618217 A0A1B0GVX0 72 aa12.31□□□□□ -0.44
CBWD3-213ENST00000618217 A8MWP4 228 aa12.3□□□□□ -0.44
CBWD3-213ENST00000618217 DSCR10P59022 87 aa12.29□□□□□ -0.44
CBWD3-213ENST00000618217 NOTCH2NLQ7Z3S9 236 aa12.29□□□□□ -0.44
CBWD3-213ENST00000618217 IGHV6-1A0A0B4J1U7 121 aa12.28□□□□□ -0.44
CBWD3-213ENST00000618217 FAM236AA0A1B0GUQ0 79 aa12.28□□□□□ -0.44
CBWD3-213ENST00000618217 FAM236BA0A1B0GV22 79 aa12.28□□□□□ -0.44
CBWD3-213ENST00000618217 LINC00313P59037 77 aa12.26□□□□□ -0.45
CBWD3-213ENST00000618217 NDUFB1O75438 58 aa12.25□□□□□ -0.45
CBWD3-213ENST00000618217 K7EQZ3 153 aa12.24□□□□□ -0.45
CBWD3-213ENST00000618217 KRTAP16-1A8MUX0 517 aa12.22□□□□□ -0.45
CBWD3-213ENST00000618217 PRR15Q8IV56 129 aa12.22□□□□□ -0.45
CBWD3-213ENST00000618217 C8orf87E5RJ46 101 aa12.22□□□□□ -0.45
CBWD3-213ENST00000618217 RPL37P61927 97 aaKnown RBP12.19□□□□□ -0.46
CBWD3-213ENST00000618217 Q75L30 129 aa12.17□□□□□ -0.46
CBWD3-213ENST00000618217 C20orf166-AS1Q96NR2 134 aa12.17□□□□□ -0.46
CBWD3-213ENST00000618217 C8orf17Q9NRJ1 99 aa12.16□□□□□ -0.46
CBWD3-213ENST00000618217 A8MUU9 505 aa12.15□□□□□ -0.46
CBWD3-213ENST00000618217 SEC61BP60468 96 aaKnown RBP12.15□□□□□ -0.46
CBWD3-213ENST00000618217 MUC17Q685J3 4493 aa12.12□□□□□ -0.47
CBWD3-213ENST00000618217 MMP24-AS1A0A0U1RRL7 71 aa12.11□□□□□ -0.47
CBWD3-213ENST00000618217 ATOX1O00244 68 aa12.11□□□□□ -0.47
CBWD3-213ENST00000618217 PCP4P48539 62 aa12.1□□□□□ -0.47
CBWD3-213ENST00000618217 PCOTHQ58A44 107 aa12.09□□□□□ -0.47
CBWD3-213ENST00000618217 ANAPC13Q9BS18 74 aa12.09□□□□□ -0.47
CBWD3-213ENST00000618217 HCG22E2RYF7 251 aa12.08□□□□□ -0.48
CBWD3-213ENST00000618217 RNF213Q63HN8 5207 aa12.07□□□□□ -0.48
CBWD3-213ENST00000618217 WFDC13Q8IUB5 93 aa12.05□□□□□ -0.48
CBWD3-213ENST00000618217 Q8N9P0 234 aaPredicted RBP12.04□□□□□ -0.48
CBWD3-213ENST00000618217 KRTAP4-1Q9BYQ7 146 aa12.02□□□□□ -0.49
CBWD3-213ENST00000618217 hDV103S1A0JD37 113 aa12.01□□□□□ -0.49
CBWD3-213ENST00000618217 TMEM254Q8TBM7 123 aa12.01□□□□□ -0.49
CBWD3-213ENST00000618217 CASC2Q6XLA1 102 aa12□□□□□ -0.49
CBWD3-213ENST00000618217 ATP11AUNQ6ZP68 121 aa12□□□□□ -0.49
CBWD3-213ENST00000618217 MRPL34Q9BQ48 92 aaKnown RBP11.98□□□□□ -0.49
CBWD3-213ENST00000618217 MUC2Q02817 5179 aa11.98□□□□□ -0.49
CBWD3-213ENST00000618217 SMIM20Q8N5G0 67 aa11.94□□□□□ -0.5
CBWD3-213ENST00000618217 SERP2Q8N6R1 65 aa11.93□□□□□ -0.5
CBWD3-213ENST00000618217 TRAV7A0A075B6U4 112 aa11.91□□□□□ -0.5
CBWD3-213ENST00000618217 OCR1Q9BZK8 76 aa11.89□□□□□ -0.51
CBWD3-213ENST00000618217 COX7CP15954 63 aa11.88□□□□□ -0.51
CBWD3-213ENST00000618217 ZCCHC13Q8WW36 166 aaKnown RBP11.87□□□□□ -0.51
CBWD3-213ENST00000618217 CCDC179H3BU77 68 aa11.83□□□□□ -0.52
CBWD3-213ENST00000618217 UQCRQO14949 82 aa11.82□□□□□ -0.52
CBWD3-213ENST00000618217 NDUFS5O43920 106 aa11.82□□□□□ -0.52
CBWD3-213ENST00000618217 Q5W150 140 aa11.75□□□□□ -0.53
CBWD3-213ENST00000618217 C20orf197Q8N268 126 aa11.73□□□□□ -0.53
CBWD3-213ENST00000618217 TP53AIP1Q9HCN2 124 aa11.72□□□□□ -0.53
CBWD3-213ENST00000618217 KRTAP19-2Q3LHN2 52 aa11.68□□□□□ -0.54
CBWD3-213ENST00000618217 C5orf47Q569G3 176 aa11.68□□□□□ -0.54
CBWD3-213ENST00000618217 H0Y9P7 68 aa11.66□□□□□ -0.54
CBWD3-213ENST00000618217 SPINK7P58062 85 aa11.65□□□□□ -0.54
CBWD3-213ENST00000618217 SNURFQ9Y675 71 aa11.65□□□□□ -0.54
CBWD3-213ENST00000618217 TRAV22A0A0B4J277 110 aa11.64□□□□□ -0.55
CBWD3-213ENST00000618217 MP68P56378 58 aa11.64□□□□□ -0.55
CBWD3-213ENST00000618217 A0A0U1RQV1 116 aa11.62□□□□□ -0.55
CBWD3-213ENST00000618217 KLKP1Q107X0 134 aa11.6□□□□□ -0.55
CBWD3-213ENST00000618217 HRES1P13985 223 aa11.6□□□□□ -0.55
CBWD3-213ENST00000618217 LCE2CQ5TA81 110 aa11.6□□□□□ -0.55
CBWD3-213ENST00000618217 CYSTM1Q9H1C7 97 aa11.6□□□□□ -0.55
CBWD3-213ENST00000618217 FAT4Q6V0I7 4981 aa11.58□□□□□ -0.56
CBWD3-213ENST00000618217 LINC00208Q96KT6 92 aa11.57□□□□□ -0.56
CBWD3-213ENST00000618217 MPLKIPQ8TAP9 179 aa11.57□□□□□ -0.56
CBWD3-213ENST00000618217 H3BPC8 53 aa11.54□□□□□ -0.56
CBWD3-213ENST00000618217 C1orf64Q8NEQ6 169 aa11.53□□□□□ -0.56
CBWD3-213ENST00000618217 IGKV2D-30A0A075B6S6 120 aa11.51□□□□□ -0.57
CBWD3-213ENST00000618217 IGKV2-30P06310 120 aa11.51□□□□□ -0.57
CBWD3-213ENST00000618217 C7orf65Q6ZTY9 151 aa11.5□□□□□ -0.57
CBWD3-213ENST00000618217 NDUFC1O43677 76 aa11.47□□□□□ -0.57
CBWD3-213ENST00000618217 H7BZZ5 65 aa11.46□□□□□ -0.58
CBWD3-213ENST00000618217 COX6B2Q6YFQ2 88 aa11.44□□□□□ -0.58
CBWD3-213ENST00000618217 LCE2AQ5TA79 106 aaPredicted RBP11.43□□□□□ -0.58
CBWD3-213ENST00000618217 RBM12B-AS1Q9P1G2 102 aa11.43□□□□□ -0.58
CBWD3-213ENST00000618217 LOC101927531A0A1B0GV80 90 aa11.42□□□□□ -0.58
CBWD3-213ENST00000618217 TMEM258P61165 79 aa11.38□□□□□ -0.59
CBWD3-213ENST00000618217 MT1HP80294 61 aa11.37□□□□□ -0.59
CBWD3-213ENST00000618217 CYP4F30PQ9H0H9 118 aa11.37□□□□□ -0.59
CBWD3-213ENST00000618217 FAM236DA0A1B0GTK5 79 aa11.33□□□□□ -0.6
CBWD3-213ENST00000618217 FAM236CP0DP71 79 aa11.33□□□□□ -0.6
CBWD3-213ENST00000618217 FLGP20930 4061 aaPredicted RBP11.32□□□□□ -0.6
CBWD3-213ENST00000618217 C4orf26Q17RF5 130 aa11.28□□□□□ -0.6
CBWD3-213ENST00000618217 ATP5EP56381 51 aaPredicted RBP11.23□□□□□ -0.61
CBWD3-213ENST00000618217 SPANXA2-OT1Q8N9U9 137 aa11.21□□□□□ -0.61
CBWD3-213ENST00000618217 KRTAP3-1Q9BYR8 98 aa11.19□□□□□ -0.62
CBWD3-213ENST00000618217 H1FX-AS1Q4G0G2 97 aa11.17□□□□□ -0.62
CBWD3-213ENST00000618217 M0R2T5 61 aa11.13□□□□□ -0.63
CBWD3-213ENST00000618217 KRTAP10-6P60371 365 aaPredicted RBP11.05□□□□□ -0.64
CBWD3-213ENST00000618217 LORP23490 312 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms