RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 ZNF292O60281 2723 aa0.76□□□□□ -2.29
HMGB1P24-202ENST00000615653 GVINP1Q7Z2Y8 2422 aa0.76□□□□□ -2.29
HMGB1P24-202ENST00000615653 DEFB108BQ8NET1 73 aa0.76□□□□□ -2.29
HMGB1P24-202ENST00000615653 RHPN1-AS1Q9BWJ2 59 aa0.76□□□□□ -2.29
HMGB1P24-202ENST00000615653 Q9Y3F1 56 aa0.76□□□□□ -2.29
HMGB1P24-202ENST00000615653 LAMA5O15230 3695 aa0.76□□□□□ -2.29
HMGB1P24-202ENST00000615653 DNAH14Q0VDD8 3507 aa0.76□□□□□ -2.29
HMGB1P24-202ENST00000615653 UBR5O95071 2799 aaPredicted RBP0.76□□□□□ -2.29
HMGB1P24-202ENST00000615653 MAP1BP46821 2468 aaKnown RBP0.76□□□□□ -2.29
HMGB1P24-202ENST00000615653 XIRP2A4UGR9 3374 aa0.76□□□□□ -2.29
HMGB1P24-202ENST00000615653 WDFY4Q6ZS81 3184 aa0.75□□□□□ -2.29
HMGB1P24-202ENST00000615653 BOD1L1Q8NFC6 3051 aa0.75□□□□□ -2.29
HMGB1P24-202ENST00000615653 DSPP15924 2871 aaKnown RBP0.75□□□□□ -2.29
HMGB1P24-202ENST00000615653 FAM186AA6NE01 2351 aa0.75□□□□□ -2.29
HMGB1P24-202ENST00000615653 TRIOO75962 3097 aa0.75□□□□□ -2.29
HMGB1P24-202ENST00000615653 DEFB135Q30KP9 77 aa0.75□□□□□ -2.29
HMGB1P24-202ENST00000615653 PRRC2CQ9Y520 2896 aaKnown RBP0.75□□□□□ -2.29
HMGB1P24-202ENST00000615653 NCOR1O75376 2440 aa0.75□□□□□ -2.29
HMGB1P24-202ENST00000615653 DMXL1Q9Y485 3027 aa0.75□□□□□ -2.29
HMGB1P24-202ENST00000615653 LYSTQ99698 3801 aa0.74□□□□□ -2.29
HMGB1P24-202ENST00000615653 TTC28Q96AY4 2481 aa0.74□□□□□ -2.29
HMGB1P24-202ENST00000615653 KALRNO60229 2985 aa0.74□□□□□ -2.29
HMGB1P24-202ENST00000615653 CACNA1HO95180 2353 aa0.74□□□□□ -2.29
HMGB1P24-202ENST00000615653 CELSR3Q9NYQ7 3312 aa0.74□□□□□ -2.29
HMGB1P24-202ENST00000615653 CHD6Q8TD26 2715 aa0.74□□□□□ -2.29
HMGB1P24-202ENST00000615653 SMG1Q96Q15 3661 aaKnown RBP0.74□□□□□ -2.29
HMGB1P24-202ENST00000615653 WDFY3Q8IZQ1 3526 aa0.74□□□□□ -2.29
HMGB1P24-202ENST00000615653 CREBBPQ92793 2442 aa0.74□□□□□ -2.29
HMGB1P24-202ENST00000615653 DNAH11Q96DT5 4516 aa0.74□□□□□ -2.29
HMGB1P24-202ENST00000615653 FRAS1Q86XX4 4008 aa0.73□□□□□ -2.29
HMGB1P24-202ENST00000615653 CSMD1Q96PZ7 3565 aa0.73□□□□□ -2.29
HMGB1P24-202ENST00000615653 LAMA2P24043 3122 aaKnown RBP0.73□□□□□ -2.29
HMGB1P24-202ENST00000615653 BSNQ9UPA5 3926 aa0.73□□□□□ -2.29
HMGB1P24-202ENST00000615653 EP400Q96L91 3159 aa0.73□□□□□ -2.29
HMGB1P24-202ENST00000615653 M0QZ58 72 aa0.73□□□□□ -2.29
HMGB1P24-202ENST00000615653 M0R2T5 61 aa0.73□□□□□ -2.29
HMGB1P24-202ENST00000615653 HTN1P15515 57 aa0.73□□□□□ -2.29
HMGB1P24-202ENST00000615653 DNAH12Q6ZR08 3092 aa0.73□□□□□ -2.29
HMGB1P24-202ENST00000615653 CELSR1Q9NYQ6 3014 aa0.73□□□□□ -2.29
HMGB1P24-202ENST00000615653 VWFP04275 2813 aa0.73□□□□□ -2.29
HMGB1P24-202ENST00000615653 CCDC168Q8NDH2 2452 aa0.73□□□□□ -2.29
HMGB1P24-202ENST00000615653 ITPR1Q14643 2758 aa0.73□□□□□ -2.29
HMGB1P24-202ENST00000615653 LAMA3Q16787 3333 aa0.72□□□□□ -2.29
HMGB1P24-202ENST00000615653 CHD9Q3L8U1 2897 aa0.72□□□□□ -2.29
HMGB1P24-202ENST00000615653 ANK2Q01484 3957 aa0.72□□□□□ -2.29
HMGB1P24-202ENST00000615653 LAMA1P25391 3075 aa0.72□□□□□ -2.29
HMGB1P24-202ENST00000615653 COL12A1Q99715 3063 aa0.72□□□□□ -2.29
HMGB1P24-202ENST00000615653 FRYQ5TBA9 3013 aa0.72□□□□□ -2.29
HMGB1P24-202ENST00000615653 SPG11Q96JI7 2443 aa0.72□□□□□ -2.29
HMGB1P24-202ENST00000615653 ABCA2Q9BZC7 2435 aa0.72□□□□□ -2.29
HMGB1P24-202ENST00000615653 U3KQA8 63 aa0.72□□□□□ -2.29
HMGB1P24-202ENST00000615653 TRANK1O15050 2925 aa0.72□□□□□ -2.29
HMGB1P24-202ENST00000615653 COL6A5A8TX70 2615 aa0.72□□□□□ -2.29
HMGB1P24-202ENST00000615653 LRBAP50851 2863 aa0.72□□□□□ -2.29
HMGB1P24-202ENST00000615653 TRRAPQ9Y4A5 3859 aa0.71□□□□□ -2.3
HMGB1P24-202ENST00000615653 ATMQ13315 3056 aa0.71□□□□□ -2.3
HMGB1P24-202ENST00000615653 POLQO75417 2590 aa0.71□□□□□ -2.3
HMGB1P24-202ENST00000615653 ABCA12Q86UK0 2595 aa0.71□□□□□ -2.3
HMGB1P24-202ENST00000615653 SRRM2Q9UQ35 2752 aaKnown RBP0.71□□□□□ -2.3
HMGB1P24-202ENST00000615653 NCOR2Q9Y618 2525 aa0.71□□□□□ -2.3
HMGB1P24-202ENST00000615653 LOC400499M0QZD8 3231 aa0.71□□□□□ -2.3
HMGB1P24-202ENST00000615653 BRCA2P51587 3418 aa0.71□□□□□ -2.3
HMGB1P24-202ENST00000615653 H3BUX3 64 aa0.71□□□□□ -2.3
HMGB1P24-202ENST00000615653 DEFB136Q30KP8 78 aa0.71□□□□□ -2.3
HMGB1P24-202ENST00000615653 EP300Q09472 2414 aaPredicted RBP0.71□□□□□ -2.3
HMGB1P24-202ENST00000615653 ASPMQ8IZT6 3477 aa0.71□□□□□ -2.3
HMGB1P24-202ENST00000615653 FREM2Q5SZK8 3169 aa0.71□□□□□ -2.3
HMGB1P24-202ENST00000615653 VCANP13611 3396 aa0.71□□□□□ -2.3
HMGB1P24-202ENST00000615653 CRYBG3Q68DQ2 2970 aa0.7□□□□□ -2.3
HMGB1P24-202ENST00000615653 CMYA5Q8N3K9 4069 aa0.7□□□□□ -2.3
HMGB1P24-202ENST00000615653 NAV2Q8IVL1 2488 aa0.7□□□□□ -2.3
HMGB1P24-202ENST00000615653 SMR3AQ99954 134 aa0.7□□□□□ -2.3
HMGB1P24-202ENST00000615653 DNAH8Q96JB1 4490 aa0.7□□□□□ -2.3
HMGB1P24-202ENST00000615653 MAP1AP78559 2803 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P24-202ENST00000615653 AKAP13Q12802 2813 aa0.7□□□□□ -2.3
HMGB1P24-202ENST00000615653 CSMD3Q7Z407 3707 aa0.69□□□□□ -2.3
HMGB1P24-202ENST00000615653 HELZ2Q9BYK8 2649 aaKnown RBP0.69□□□□□ -2.3
HMGB1P24-202ENST00000615653 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
HMGB1P24-202ENST00000615653 TENM4Q6N022 2769 aa0.69□□□□□ -2.3
HMGB1P24-202ENST00000615653 NBASA2RRP1 2371 aa0.69□□□□□ -2.3
HMGB1P24-202ENST00000615653 CEP290O15078 2479 aa0.69□□□□□ -2.3
HMGB1P24-202ENST00000615653 C9orf92A6NGG3 77 aa0.69□□□□□ -2.3
HMGB1P24-202ENST00000615653 DEFB133Q30KQ1 61 aa0.69□□□□□ -2.3
HMGB1P24-202ENST00000615653 DCHS2Q6V1P9 2916 aa0.69□□□□□ -2.3
HMGB1P24-202ENST00000615653 F8P00451 2351 aa0.69□□□□□ -2.3
HMGB1P24-202ENST00000615653 DNAH1Q9P2D7 4330 aa0.68□□□□□ -2.3
HMGB1P24-202ENST00000615653 MUC3AQ02505 3323 aa0.68□□□□□ -2.3
HMGB1P24-202ENST00000615653 DMXL2Q8TDJ6 3036 aa0.68□□□□□ -2.3
HMGB1P24-202ENST00000615653 SETD2Q9BYW2 2564 aaPredicted RBP0.68□□□□□ -2.3
HMGB1P24-202ENST00000615653 DMBT1Q9UGM3 2413 aaPredicted RBP0.68□□□□□ -2.3
HMGB1P24-202ENST00000615653 MYCBP2O75592 4640 aa0.68□□□□□ -2.3
HMGB1P24-202ENST00000615653 PTPN13Q12923 2485 aa0.67□□□□□ -2.3
HMGB1P24-202ENST00000615653 DNAH3Q8TD57 4116 aa0.67□□□□□ -2.3
HMGB1P24-202ENST00000615653 HIVEP3Q5T1R4 2406 aa0.67□□□□□ -2.3
HMGB1P24-202ENST00000615653 APCP25054 2843 aa0.67□□□□□ -2.3
HMGB1P24-202ENST00000615653 DNAH7Q8WXX0 4024 aa0.67□□□□□ -2.3
HMGB1P24-202ENST00000615653 TNP1P09430 55 aa0.67□□□□□ -2.3
HMGB1P24-202ENST00000615653 PKD1L2Q7Z442 2459 aa0.67□□□□□ -2.3
HMGB1P24-202ENST00000615653 VPS13CQ709C8 3753 aa0.67□□□□□ -2.3
HMGB1P24-202ENST00000615653 DNAH2Q9P225 4427 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms