RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 HMCN2Q8NDA2 5059 aa8.2□□□□□ -1.1
ZNF548-212ENST00000602086 K7EQZ3 153 aa8.2□□□□□ -1.1
ZNF548-212ENST00000602086 UBR4Q5T4S7 5183 aa8.19□□□□□ -1.1
ZNF548-212ENST00000602086 A0A087WVE0 104 aa8.19□□□□□ -1.1
ZNF548-212ENST00000602086 TNXBP22105 4242 aa8.18□□□□□ -1.1
ZNF548-212ENST00000602086 LRP1Q07954 4544 aaKnown RBP8.18□□□□□ -1.1
ZNF548-212ENST00000602086 Q8N9L7 120 aa8.18□□□□□ -1.1
ZNF548-212ENST00000602086 MT1HL1P0DM35 61 aa8.17□□□□□ -1.1
ZNF548-212ENST00000602086 FAM236AA0A1B0GUQ0 79 aa8.16□□□□□ -1.1
ZNF548-212ENST00000602086 FAM236BA0A1B0GV22 79 aa8.16□□□□□ -1.1
ZNF548-212ENST00000602086 A0A1B0GVX0 72 aa8.16□□□□□ -1.1
ZNF548-212ENST00000602086 HCG22E2RYF7 251 aa8.13□□□□□ -1.11
ZNF548-212ENST00000602086 C8orf87E5RJ46 101 aa8.12□□□□□ -1.11
ZNF548-212ENST00000602086 ATOX1O00244 68 aa8.12□□□□□ -1.11
ZNF548-212ENST00000602086 C8orf17Q9NRJ1 99 aa8.11□□□□□ -1.11
ZNF548-212ENST00000602086 MMP24-AS1A0A0U1RRL7 71 aa8.1□□□□□ -1.11
ZNF548-212ENST00000602086 SMIM20Q8N5G0 67 aa8.09□□□□□ -1.11
ZNF548-212ENST00000602086 IGHV6-1A0A0B4J1U7 121 aa8.08□□□□□ -1.12
ZNF548-212ENST00000602086 CASC2Q6XLA1 102 aa8.07□□□□□ -1.12
ZNF548-212ENST00000602086 hDV103S1A0JD37 113 aa8.06□□□□□ -1.12
ZNF548-212ENST00000602086 FP248Q71RG6 208 aaPredicted RBP8.06□□□□□ -1.12
ZNF548-212ENST00000602086 TMEM254Q8TBM7 123 aa8.05□□□□□ -1.12
ZNF548-212ENST00000602086 LINC00313P59037 77 aa8.04□□□□□ -1.12
ZNF548-212ENST00000602086 WFDC13Q8IUB5 93 aa8.03□□□□□ -1.12
ZNF548-212ENST00000602086 NOTCH2NLQ7Z3S9 236 aa8.02□□□□□ -1.13
ZNF548-212ENST00000602086 ANAPC13Q9BS18 74 aa8.02□□□□□ -1.13
ZNF548-212ENST00000602086 TRAV7A0A075B6U4 112 aa8.01□□□□□ -1.13
ZNF548-212ENST00000602086 MRPL34Q9BQ48 92 aaKnown RBP8.01□□□□□ -1.13
ZNF548-212ENST00000602086 OCR1Q9BZK8 76 aa8.01□□□□□ -1.13
ZNF548-212ENST00000602086 SERP2Q8N6R1 65 aa8□□□□□ -1.13
ZNF548-212ENST00000602086 KRTAP16-1A8MUX0 517 aa7.97□□□□□ -1.13
ZNF548-212ENST00000602086 RETNLBQ9BQ08 111 aa7.97□□□□□ -1.13
ZNF548-212ENST00000602086 TP53AIP1Q9HCN2 124 aa7.97□□□□□ -1.13
ZNF548-212ENST00000602086 PCP4P48539 62 aa7.96□□□□□ -1.14
ZNF548-212ENST00000602086 Q8N9P0 234 aaPredicted RBP7.96□□□□□ -1.14
ZNF548-212ENST00000602086 UQCRQO14949 82 aa7.95□□□□□ -1.14
ZNF548-212ENST00000602086 COX7CP15954 63 aa7.95□□□□□ -1.14
ZNF548-212ENST00000602086 RNF213Q63HN8 5207 aa7.91□□□□□ -1.14
ZNF548-212ENST00000602086 IGLV7-46A0A075B6I9 117 aa7.91□□□□□ -1.14
ZNF548-212ENST00000602086 C5orf47Q569G3 176 aa7.91□□□□□ -1.14
ZNF548-212ENST00000602086 LRP2P98164 4655 aa7.9□□□□□ -1.14
ZNF548-212ENST00000602086 NDUFS5O43920 106 aa7.87□□□□□ -1.15
ZNF548-212ENST00000602086 C20orf166-AS1Q96NR2 134 aa7.87□□□□□ -1.15
ZNF548-212ENST00000602086 A8MUU9 505 aa7.86□□□□□ -1.15
ZNF548-212ENST00000602086 H3BPC8 53 aa7.86□□□□□ -1.15
ZNF548-212ENST00000602086 KRTAP13-3Q3SY46 172 aa7.86□□□□□ -1.15
ZNF548-212ENST00000602086 C9orf92A6NGG3 77 aa7.85□□□□□ -1.15
ZNF548-212ENST00000602086 TRAV22A0A0B4J277 110 aa7.84□□□□□ -1.15
ZNF548-212ENST00000602086 TPRXLQ17RH7 258 aa7.84□□□□□ -1.15
ZNF548-212ENST00000602086 MP68P56378 58 aa7.83□□□□□ -1.16
ZNF548-212ENST00000602086 PRR4Q16378 134 aa7.83□□□□□ -1.16
ZNF548-212ENST00000602086 Q75L30 129 aa7.83□□□□□ -1.16
ZNF548-212ENST00000602086 CCDC179H3BU77 68 aa7.82□□□□□ -1.16
ZNF548-212ENST00000602086 KLKP1Q107X0 134 aa7.82□□□□□ -1.16
ZNF548-212ENST00000602086 H0Y9P7 68 aa7.81□□□□□ -1.16
ZNF548-212ENST00000602086 A0A0U1RQV1 116 aa7.8□□□□□ -1.16
ZNF548-212ENST00000602086 C20orf197Q8N268 126 aa7.8□□□□□ -1.16
ZNF548-212ENST00000602086 Q5W150 140 aa7.78□□□□□ -1.16
ZNF548-212ENST00000602086 ZCCHC13Q8WW36 166 aaKnown RBP7.78□□□□□ -1.16
ZNF548-212ENST00000602086 XP32Q5T750 250 aa7.76□□□□□ -1.17
ZNF548-212ENST00000602086 NDUFC1O43677 76 aa7.75□□□□□ -1.17
ZNF548-212ENST00000602086 LOC101927531A0A1B0GV80 90 aa7.74□□□□□ -1.17
ZNF548-212ENST00000602086 RPL37P61927 97 aaKnown RBP7.74□□□□□ -1.17
ZNF548-212ENST00000602086 C1orf64Q8NEQ6 169 aa7.74□□□□□ -1.17
ZNF548-212ENST00000602086 LINC00208Q96KT6 92 aa7.74□□□□□ -1.17
ZNF548-212ENST00000602086 SNURFQ9Y675 71 aa7.72□□□□□ -1.17
ZNF548-212ENST00000602086 LPAP08519 4548 aa7.69□□□□□ -1.18
ZNF548-212ENST00000602086 IGKV2-30P06310 120 aa7.68□□□□□ -1.18
ZNF548-212ENST00000602086 ATP11AUNQ6ZP68 121 aa7.68□□□□□ -1.18
ZNF548-212ENST00000602086 H7BZZ5 65 aa7.67□□□□□ -1.18
ZNF548-212ENST00000602086 CYSTM1Q9H1C7 97 aa7.67□□□□□ -1.18
ZNF548-212ENST00000602086 CYP4F30PQ9H0H9 118 aa7.66□□□□□ -1.18
ZNF548-212ENST00000602086 TMEM258P61165 79 aa7.62□□□□□ -1.19
ZNF548-212ENST00000602086 C7orf65Q6ZTY9 151 aa7.62□□□□□ -1.19
ZNF548-212ENST00000602086 SPANXA2-OT1Q8N9U9 137 aa7.6□□□□□ -1.19
ZNF548-212ENST00000602086 IGKV2D-30A0A075B6S6 120 aa7.58□□□□□ -1.2
ZNF548-212ENST00000602086 ATP5EP56381 51 aaPredicted RBP7.57□□□□□ -1.2
ZNF548-212ENST00000602086 SEC61BP60468 96 aaKnown RBP7.56□□□□□ -1.2
ZNF548-212ENST00000602086 SPINK7P58062 85 aa7.55□□□□□ -1.2
ZNF548-212ENST00000602086 PCOTHQ58A44 107 aa7.54□□□□□ -1.2
ZNF548-212ENST00000602086 KRTAP9-2Q9BYQ4 174 aa7.53□□□□□ -1.2
ZNF548-212ENST00000602086 FAM236DA0A1B0GTK5 79 aa7.52□□□□□ -1.21
ZNF548-212ENST00000602086 FAM236CP0DP71 79 aa7.52□□□□□ -1.21
ZNF548-212ENST00000602086 HRES1P13985 223 aa7.51□□□□□ -1.21
ZNF548-212ENST00000602086 MUC17Q685J3 4493 aa7.48□□□□□ -1.21
ZNF548-212ENST00000602086 MUC2Q02817 5179 aa7.46□□□□□ -1.22
ZNF548-212ENST00000602086 DMAC1Q96GE9 116 aa7.43□□□□□ -1.22
ZNF548-212ENST00000602086 A8MUN3 132 aa7.42□□□□□ -1.22
ZNF548-212ENST00000602086 COX6B2Q6YFQ2 88 aa7.39□□□□□ -1.23
ZNF548-212ENST00000602086 KRTAP9-6A0A140TA67 174 aa7.38□□□□□ -1.23
ZNF548-212ENST00000602086 C4orf26Q17RF5 130 aa7.38□□□□□ -1.23
ZNF548-212ENST00000602086 MPLKIPQ8TAP9 179 aa7.38□□□□□ -1.23
ZNF548-212ENST00000602086 ACYP2P14621 99 aa7.37□□□□□ -1.23
ZNF548-212ENST00000602086 RPS28P62857 69 aaKnown RBP7.37□□□□□ -1.23
ZNF548-212ENST00000602086 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
ZNF548-212ENST00000602086 SERP1Q9Y6X1 66 aa7.37□□□□□ -1.23
ZNF548-212ENST00000602086 FAT4Q6V0I7 4981 aa7.33□□□□□ -1.24
ZNF548-212ENST00000602086 KRTAP3-1Q9BYR8 98 aa7.32□□□□□ -1.24
ZNF548-212ENST00000602086 RBM12B-AS1Q9P1G2 102 aa7.32□□□□□ -1.24
ZNF548-212ENST00000602086 KRTAP4-1Q9BYQ7 146 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms