RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 RETNLBQ9BQ08 111 aa12.46□□□□□ -0.41
SNRNP70-209ENST00000601065 IMUPQ9GZP8 106 aa12.44□□□□□ -0.42
SNRNP70-209ENST00000601065 K7EQZ3 153 aa12.43□□□□□ -0.42
SNRNP70-209ENST00000601065 A8MWP4 228 aa12.42□□□□□ -0.42
SNRNP70-209ENST00000601065 A0A087WVE0 104 aa12.41□□□□□ -0.42
SNRNP70-209ENST00000601065 NDUFB1O75438 58 aa12.38□□□□□ -0.43
SNRNP70-209ENST00000601065 PRR15Q8IV56 129 aa12.37□□□□□ -0.43
SNRNP70-209ENST00000601065 HERC1Q15751 4861 aa12.33□□□□□ -0.44
SNRNP70-209ENST00000601065 FP248Q71RG6 208 aaPredicted RBP12.33□□□□□ -0.44
SNRNP70-209ENST00000601065 IGHV6-1A0A0B4J1U7 121 aa12.32□□□□□ -0.44
SNRNP70-209ENST00000601065 A0A1B0GVX0 72 aa12.32□□□□□ -0.44
SNRNP70-209ENST00000601065 ANAPC13Q9BS18 74 aa12.31□□□□□ -0.44
SNRNP70-209ENST00000601065 PRR4Q16378 134 aa12.27□□□□□ -0.45
SNRNP70-209ENST00000601065 FAM236AA0A1B0GUQ0 79 aa12.26□□□□□ -0.45
SNRNP70-209ENST00000601065 FAM236BA0A1B0GV22 79 aa12.26□□□□□ -0.45
SNRNP70-209ENST00000601065 IGLV7-46A0A075B6I9 117 aa12.25□□□□□ -0.45
SNRNP70-209ENST00000601065 NOTCH2NLQ7Z3S9 236 aa12.25□□□□□ -0.45
SNRNP70-209ENST00000601065 HCG22E2RYF7 251 aa12.24□□□□□ -0.45
SNRNP70-209ENST00000601065 C8orf17Q9NRJ1 99 aa12.24□□□□□ -0.45
SNRNP70-209ENST00000601065 MMP24-AS1A0A0U1RRL7 71 aa12.23□□□□□ -0.45
SNRNP70-209ENST00000601065 WFDC13Q8IUB5 93 aa12.23□□□□□ -0.45
SNRNP70-209ENST00000601065 LINC00313P59037 77 aa12.18□□□□□ -0.46
SNRNP70-209ENST00000601065 CASC2Q6XLA1 102 aa12.18□□□□□ -0.46
SNRNP70-209ENST00000601065 C8orf87E5RJ46 101 aa12.18□□□□□ -0.46
SNRNP70-209ENST00000601065 hDV103S1A0JD37 113 aa12.17□□□□□ -0.46
SNRNP70-209ENST00000601065 C9orf92A6NGG3 77 aa12.14□□□□□ -0.47
SNRNP70-209ENST00000601065 KRTAP13-3Q3SY46 172 aa12.14□□□□□ -0.47
SNRNP70-209ENST00000601065 TPRXLQ17RH7 258 aa12.12□□□□□ -0.47
SNRNP70-209ENST00000601065 LPAP08519 4548 aa12.11□□□□□ -0.47
SNRNP70-209ENST00000601065 HMCN2Q8NDA2 5059 aa12.1□□□□□ -0.47
SNRNP70-209ENST00000601065 TMEM254Q8TBM7 123 aa12.09□□□□□ -0.47
SNRNP70-209ENST00000601065 ATOX1O00244 68 aa12.08□□□□□ -0.48
SNRNP70-209ENST00000601065 MRPL34Q9BQ48 92 aaKnown RBP12.07□□□□□ -0.48
SNRNP70-209ENST00000601065 KRTAP16-1A8MUX0 517 aa12.05□□□□□ -0.48
SNRNP70-209ENST00000601065 CCDC179H3BU77 68 aa12.01□□□□□ -0.49
SNRNP70-209ENST00000601065 NDUFS5O43920 106 aa12□□□□□ -0.49
SNRNP70-209ENST00000601065 OCR1Q9BZK8 76 aa12□□□□□ -0.49
SNRNP70-209ENST00000601065 XP32Q5T750 250 aa11.99□□□□□ -0.49
SNRNP70-209ENST00000601065 LRP2P98164 4655 aa11.98□□□□□ -0.49
SNRNP70-209ENST00000601065 SMIM20Q8N5G0 67 aa11.97□□□□□ -0.49
SNRNP70-209ENST00000601065 Q8N9P0 234 aaPredicted RBP11.97□□□□□ -0.49
SNRNP70-209ENST00000601065 UQCRQO14949 82 aa11.95□□□□□ -0.5
SNRNP70-209ENST00000601065 TRAV7A0A075B6U4 112 aa11.94□□□□□ -0.5
SNRNP70-209ENST00000601065 C20orf166-AS1Q96NR2 134 aa11.94□□□□□ -0.5
SNRNP70-209ENST00000601065 COX7CP15954 63 aa11.93□□□□□ -0.5
SNRNP70-209ENST00000601065 SERP2Q8N6R1 65 aa11.92□□□□□ -0.5
SNRNP70-209ENST00000601065 A8MUU9 505 aa11.91□□□□□ -0.5
SNRNP70-209ENST00000601065 TP53AIP1Q9HCN2 124 aa11.9□□□□□ -0.5
SNRNP70-209ENST00000601065 Q75L30 129 aa11.9□□□□□ -0.51
SNRNP70-209ENST00000601065 RPL37P61927 97 aaKnown RBP11.85□□□□□ -0.51
SNRNP70-209ENST00000601065 Q5W150 140 aa11.81□□□□□ -0.52
SNRNP70-209ENST00000601065 TRAV22A0A0B4J277 110 aa11.79□□□□□ -0.52
SNRNP70-209ENST00000601065 C5orf47Q569G3 176 aa11.79□□□□□ -0.52
SNRNP70-209ENST00000601065 H0Y9P7 68 aa11.77□□□□□ -0.52
SNRNP70-209ENST00000601065 MP68P56378 58 aa11.74□□□□□ -0.53
SNRNP70-209ENST00000601065 ATP11AUNQ6ZP68 121 aa11.74□□□□□ -0.53
SNRNP70-209ENST00000601065 ZCCHC13Q8WW36 166 aaKnown RBP11.74□□□□□ -0.53
SNRNP70-209ENST00000601065 C20orf197Q8N268 126 aa11.74□□□□□ -0.53
SNRNP70-209ENST00000601065 PCOTHQ58A44 107 aa11.69□□□□□ -0.54
SNRNP70-209ENST00000601065 LINC00208Q96KT6 92 aa11.69□□□□□ -0.54
SNRNP70-209ENST00000601065 SNURFQ9Y675 71 aa11.69□□□□□ -0.54
SNRNP70-209ENST00000601065 MUC17Q685J3 4493 aa11.68□□□□□ -0.54
SNRNP70-209ENST00000601065 SEC61BP60468 96 aaKnown RBP11.68□□□□□ -0.54
SNRNP70-209ENST00000601065 A0A0U1RQV1 116 aa11.67□□□□□ -0.54
SNRNP70-209ENST00000601065 C1orf64Q8NEQ6 169 aa11.67□□□□□ -0.54
SNRNP70-209ENST00000601065 H3BPC8 53 aa11.64□□□□□ -0.55
SNRNP70-209ENST00000601065 KLKP1Q107X0 134 aa11.62□□□□□ -0.55
SNRNP70-209ENST00000601065 UBR4Q5T4S7 5183 aa11.61□□□□□ -0.55
SNRNP70-209ENST00000601065 CYSTM1Q9H1C7 97 aa11.59□□□□□ -0.55
SNRNP70-209ENST00000601065 LOC101927531A0A1B0GV80 90 aa11.59□□□□□ -0.55
SNRNP70-209ENST00000601065 TMEM258P61165 79 aa11.59□□□□□ -0.55
SNRNP70-209ENST00000601065 IGKV2D-30A0A075B6S6 120 aa11.56□□□□□ -0.56
SNRNP70-209ENST00000601065 IGKV2-30P06310 120 aa11.56□□□□□ -0.56
SNRNP70-209ENST00000601065 CYP4F30PQ9H0H9 118 aa11.54□□□□□ -0.56
SNRNP70-209ENST00000601065 C7orf65Q6ZTY9 151 aa11.49□□□□□ -0.57
SNRNP70-209ENST00000601065 NDUFC1O43677 76 aa11.48□□□□□ -0.57
SNRNP70-209ENST00000601065 SPINK7P58062 85 aa11.48□□□□□ -0.57
SNRNP70-209ENST00000601065 KRTAP4-1Q9BYQ7 146 aa11.48□□□□□ -0.57
SNRNP70-209ENST00000601065 MUC2Q02817 5179 aa11.48□□□□□ -0.57
SNRNP70-209ENST00000601065 H7BZZ5 65 aa11.46□□□□□ -0.58
SNRNP70-209ENST00000601065 RNF213Q63HN8 5207 aa11.41□□□□□ -0.58
SNRNP70-209ENST00000601065 FAM236DA0A1B0GTK5 79 aa11.39□□□□□ -0.59
SNRNP70-209ENST00000601065 FAM236CP0DP71 79 aa11.39□□□□□ -0.59
SNRNP70-209ENST00000601065 RPS28P62857 69 aaKnown RBP11.37□□□□□ -0.59
SNRNP70-209ENST00000601065 HRES1P13985 223 aa11.36□□□□□ -0.59
SNRNP70-209ENST00000601065 ATP5EP56381 51 aaPredicted RBP11.32□□□□□ -0.6
SNRNP70-209ENST00000601065 C4orf26Q17RF5 130 aa11.28□□□□□ -0.6
SNRNP70-209ENST00000601065 SPANXA2-OT1Q8N9U9 137 aa11.27□□□□□ -0.61
SNRNP70-209ENST00000601065 MPLKIPQ8TAP9 179 aa11.23□□□□□ -0.61
SNRNP70-209ENST00000601065 SERP1Q9Y6X1 66 aa11.23□□□□□ -0.61
SNRNP70-209ENST00000601065 RBM12B-AS1Q9P1G2 102 aa11.17□□□□□ -0.62
SNRNP70-209ENST00000601065 COX6B2Q6YFQ2 88 aa11.14□□□□□ -0.63
SNRNP70-209ENST00000601065 DMAC1Q96GE9 116 aa11.13□□□□□ -0.63
SNRNP70-209ENST00000601065 KRTAP19-2Q3LHN2 52 aa11.12□□□□□ -0.63
SNRNP70-209ENST00000601065 KRTAP3-1Q9BYR8 98 aa11.11□□□□□ -0.63
SNRNP70-209ENST00000601065 A8MUN3 132 aa11.05□□□□□ -0.64
SNRNP70-209ENST00000601065 ACYP2P14621 99 aa11.05□□□□□ -0.64
SNRNP70-209ENST00000601065 FAT4Q6V0I7 4981 aa11.01□□□□□ -0.65
SNRNP70-209ENST00000601065 SMIM26A0A096LP01 95 aa11□□□□□ -0.65
SNRNP70-209ENST00000601065 LCE2CQ5TA81 110 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms