RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
SSBP4-207ENST00000600244 RPL37P61927 97 aaKnown RBP9.21□□□□□ -0.94
SSBP4-207ENST00000600244 TEN1Q86WV5 123 aa9.21□□□□□ -0.94
SSBP4-207ENST00000600244 LIMD2Q9BT23 127 aa9.21□□□□□ -0.94
SSBP4-207ENST00000600244 A0A1B0GV72 72 aa9.2□□□□□ -0.94
SSBP4-207ENST00000600244 JMJD7-PLA2G4BH0Y9G9 81 aa9.2□□□□□ -0.94
SSBP4-207ENST00000600244 NEBP20929 6669 aa9.18□□□□□ -0.94
SSBP4-207ENST00000600244 GTF2H5Q6ZYL4 71 aa9.18□□□□□ -0.94
SSBP4-207ENST00000600244 MT2AP02795 61 aa9.17□□□□□ -0.94
SSBP4-207ENST00000600244 DSCR8Q96T75 97 aa9.16□□□□□ -0.94
SSBP4-207ENST00000600244 KRTAP9-3Q9BYQ3 159 aa9.16□□□□□ -0.94
SSBP4-207ENST00000600244 LOC110117498A0A087WWA1 95 aa9.15□□□□□ -0.94
SSBP4-207ENST00000600244 CCKP06307 115 aa9.14□□□□□ -0.95
SSBP4-207ENST00000600244 KRTAP19-6Q3LI70 58 aa9.14□□□□□ -0.95
SSBP4-207ENST00000600244 Q6ZQT0 140 aa9.14□□□□□ -0.95
SSBP4-207ENST00000600244 LINC00846Q9NV44 126 aa9.14□□□□□ -0.95
SSBP4-207ENST00000600244 C1orf195Q5TG92 126 aa9.13□□□□□ -0.95
SSBP4-207ENST00000600244 A0A087WSZ3 146 aa9.11□□□□□ -0.95
SSBP4-207ENST00000600244 PDE6GP18545 87 aa9.11□□□□□ -0.95
SSBP4-207ENST00000600244 C14orf132Q9NPU4 83 aa9.11□□□□□ -0.95
SSBP4-207ENST00000600244 F8W1H4 67 aa9.1□□□□□ -0.95
SSBP4-207ENST00000600244 MT1FP04733 61 aa9.09□□□□□ -0.95
SSBP4-207ENST00000600244 SS18L2Q9UHA2 77 aa9.09□□□□□ -0.95
SSBP4-207ENST00000600244 A0A1B0GV90 55 aa9.07□□□□□ -0.96
SSBP4-207ENST00000600244 A0A1B0GW54 56 aa9.06□□□□□ -0.96
SSBP4-207ENST00000600244 Q96NJ1 140 aa9.06□□□□□ -0.96
SSBP4-207ENST00000600244 C21orf62-AS1Q17RA5 79 aa9.05□□□□□ -0.96
SSBP4-207ENST00000600244 VPS25Q9BRG1 176 aa9.05□□□□□ -0.96
SSBP4-207ENST00000600244 KRTAP20-1Q3LI63 56 aa9.01□□□□□ -0.97
SSBP4-207ENST00000600244 LINC00472Q9H8W2 130 aa9.01□□□□□ -0.97
SSBP4-207ENST00000600244 ETDBQ3ZM63 59 aa9□□□□□ -0.97
SSBP4-207ENST00000600244 KRTAP10-10P60014 251 aa8.97□□□□□ -0.97
SSBP4-207ENST00000600244 MUC12Q9UKN1 5478 aa8.95□□□□□ -0.98
SSBP4-207ENST00000600244 IGKV4-1P06312 121 aa8.91□□□□□ -0.98
SSBP4-207ENST00000600244 DEFB116Q30KQ4 102 aa8.91□□□□□ -0.98
SSBP4-207ENST00000600244 J3KT08 172 aa8.88□□□□□ -0.99
SSBP4-207ENST00000600244 NREPQ16612 68 aa8.88□□□□□ -0.99
SSBP4-207ENST00000600244 SIGMAR1Q99720 223 aa8.87□□□□□ -0.99
SSBP4-207ENST00000600244 ATP11AUNQ6ZP68 121 aa8.85□□□□□ -0.99
SSBP4-207ENST00000600244 Q6ZVQ6 151 aa8.85□□□□□ -0.99
SSBP4-207ENST00000600244 A0A1B0GVX0 72 aa8.81□□□□□ -1
SSBP4-207ENST00000600244 A8MWP4 228 aa8.81□□□□□ -1
SSBP4-207ENST00000600244 DSCR10P59022 87 aa8.8□□□□□ -1
SSBP4-207ENST00000600244 Q75L30 129 aa8.8□□□□□ -1
SSBP4-207ENST00000600244 NOTCH2NLQ7Z3S9 236 aa8.8□□□□□ -1
SSBP4-207ENST00000600244 IGKV3D-7A0A0C4DH55 119 aa8.79□□□□□ -1
SSBP4-207ENST00000600244 FAM240AA0A1B0GVK7 77 aa8.79□□□□□ -1
SSBP4-207ENST00000600244 KRTAP16-1A8MUX0 517 aa8.78□□□□□ -1
SSBP4-207ENST00000600244 LINC00313P59037 77 aa8.78□□□□□ -1
SSBP4-207ENST00000600244 UBL5Q9BZL1 73 aa8.78□□□□□ -1
SSBP4-207ENST00000600244 IGHV6-1A0A0B4J1U7 121 aa8.76□□□□□ -1.01
SSBP4-207ENST00000600244 C8orf87E5RJ46 101 aa8.76□□□□□ -1.01
SSBP4-207ENST00000600244 BPY2O14599 106 aa8.76□□□□□ -1.01
SSBP4-207ENST00000600244 ACYP1P07311 99 aa8.76□□□□□ -1.01
SSBP4-207ENST00000600244 NDUFB1O75438 58 aa8.75□□□□□ -1.01
SSBP4-207ENST00000600244 PRR15Q8IV56 129 aa8.75□□□□□ -1.01
SSBP4-207ENST00000600244 C20orf166-AS1Q96NR2 134 aa8.74□□□□□ -1.01
SSBP4-207ENST00000600244 A8MUU9 505 aa8.73□□□□□ -1.01
SSBP4-207ENST00000600244 K7EQZ3 153 aa8.71□□□□□ -1.02
SSBP4-207ENST00000600244 C8orf17Q9NRJ1 99 aa8.7□□□□□ -1.02
SSBP4-207ENST00000600244 MMP24-AS1A0A0U1RRL7 71 aa8.67□□□□□ -1.02
SSBP4-207ENST00000600244 CXCL6P80162 114 aa8.67□□□□□ -1.02
SSBP4-207ENST00000600244 Q8N9L7 120 aa8.65□□□□□ -1.02
SSBP4-207ENST00000600244 Q8N9P0 234 aaPredicted RBP8.64□□□□□ -1.03
SSBP4-207ENST00000600244 J3QR89 54 aa8.63□□□□□ -1.03
SSBP4-207ENST00000600244 TMEM254Q8TBM7 123 aa8.61□□□□□ -1.03
SSBP4-207ENST00000600244 FAM236DA0A1B0GTK5 79 aa8.6□□□□□ -1.03
SSBP4-207ENST00000600244 FAM236CP0DP71 79 aa8.6□□□□□ -1.03
SSBP4-207ENST00000600244 ATP5EP2Q5VTU8 51 aa8.59□□□□□ -1.03
SSBP4-207ENST00000600244 hDV103S1A0JD37 113 aa8.58□□□□□ -1.04
SSBP4-207ENST00000600244 LINC00643Q86TS7 51 aa8.58□□□□□ -1.04
SSBP4-207ENST00000600244 MRPL34Q9BQ48 92 aaKnown RBP8.58□□□□□ -1.04
SSBP4-207ENST00000600244 MDN1Q9NU22 5596 aa8.57□□□□□ -1.04
SSBP4-207ENST00000600244 MPLKIPQ8TAP9 179 aa8.57□□□□□ -1.04
SSBP4-207ENST00000600244 KRTAP2-3P0C7H8 128 aa8.56□□□□□ -1.04
SSBP4-207ENST00000600244 KRTAP2-4Q9BYR9 128 aa8.56□□□□□ -1.04
SSBP4-207ENST00000600244 KMT2DO14686 5537 aa8.54□□□□□ -1.04
SSBP4-207ENST00000600244 CASC2Q6XLA1 102 aa8.54□□□□□ -1.04
SSBP4-207ENST00000600244 HCG22E2RYF7 251 aa8.53□□□□□ -1.04
SSBP4-207ENST00000600244 WFDC13Q8IUB5 93 aa8.53□□□□□ -1.04
SSBP4-207ENST00000600244 K7ERU9 68 aa8.51□□□□□ -1.05
SSBP4-207ENST00000600244 KRTAP5-9P26371 169 aa8.5□□□□□ -1.05
SSBP4-207ENST00000600244 ZCCHC13Q8WW36 166 aaKnown RBP8.5□□□□□ -1.05
SSBP4-207ENST00000600244 HRES1P13985 223 aa8.48□□□□□ -1.05
SSBP4-207ENST00000600244 RBM12B-AS1Q9P1G2 102 aa8.48□□□□□ -1.05
SSBP4-207ENST00000600244 HIST1H4AP62805 103 aaKnown RBP8.43□□□□□ -1.06
SSBP4-207ENST00000600244 NDUFS5O43920 106 aa8.42□□□□□ -1.06
SSBP4-207ENST00000600244 Q5W150 140 aa8.41□□□□□ -1.06
SSBP4-207ENST00000600244 A0A087WVE0 104 aa8.4□□□□□ -1.06
SSBP4-207ENST00000600244 TP53AIP1Q9HCN2 124 aa8.36□□□□□ -1.07
SSBP4-207ENST00000600244 SPINK7P58062 85 aa8.34□□□□□ -1.07
SSBP4-207ENST00000600244 MT-ATP8P03928 68 aa8.33□□□□□ -1.08
SSBP4-207ENST00000600244 IMUPQ9GZP8 106 aa8.33□□□□□ -1.08
SSBP4-207ENST00000600244 A6NN06 94 aa8.32□□□□□ -1.08
SSBP4-207ENST00000600244 OCR1Q9BZK8 76 aa8.25□□□□□ -1.09
SSBP4-207ENST00000600244 UQCRQO14949 82 aa8.24□□□□□ -1.09
SSBP4-207ENST00000600244 IGKV2-30P06310 120 aa8.23□□□□□ -1.09
SSBP4-207ENST00000600244 C7orf65Q6ZTY9 151 aa8.23□□□□□ -1.09
SSBP4-207ENST00000600244 KRTAP2-2Q9BYT5 123 aa8.23□□□□□ -1.09
SSBP4-207ENST00000600244 KRTAP2-1Q9BYU5 128 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 221.3 ms