RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 LCE2DQ5TA82 110 aaPredicted RBP10.31□□□□□ -0.76
CCDC9-205ENST00000600117 SIGMAR1Q99720 223 aa10.31□□□□□ -0.76
CCDC9-205ENST00000600117 CRCT1Q9UGL9 99 aa10.31□□□□□ -0.76
CCDC9-205ENST00000600117 XP32Q5T750 250 aa10.29□□□□□ -0.76
CCDC9-205ENST00000600117 NREPQ16612 68 aa10.27□□□□□ -0.77
CCDC9-205ENST00000600117 J3KT08 172 aa10.25□□□□□ -0.77
CCDC9-205ENST00000600117 LINC00846Q9NV44 126 aa10.23□□□□□ -0.77
CCDC9-205ENST00000600117 Q6ZVQ6 151 aa10.22□□□□□ -0.77
CCDC9-205ENST00000600117 A0A1B0GVX0 72 aa10.19□□□□□ -0.78
CCDC9-205ENST00000600117 DSCR10P59022 87 aa10.19□□□□□ -0.78
CCDC9-205ENST00000600117 A8MWP4 228 aa10.17□□□□□ -0.78
CCDC9-205ENST00000600117 NOTCH2NLQ7Z3S9 236 aa10.17□□□□□ -0.78
CCDC9-205ENST00000600117 IGHV6-1A0A0B4J1U7 121 aa10.16□□□□□ -0.78
CCDC9-205ENST00000600117 IGKV3D-7A0A0C4DH55 119 aa10.15□□□□□ -0.78
CCDC9-205ENST00000600117 LINC00313P59037 77 aa10.15□□□□□ -0.78
CCDC9-205ENST00000600117 UBL5Q9BZL1 73 aa10.15□□□□□ -0.78
CCDC9-205ENST00000600117 KRTAP16-1A8MUX0 517 aa10.13□□□□□ -0.79
CCDC9-205ENST00000600117 BPY2O14599 106 aa10.13□□□□□ -0.79
CCDC9-205ENST00000600117 NDUFB1O75438 58 aa10.13□□□□□ -0.79
CCDC9-205ENST00000600117 RPL37P61927 97 aaKnown RBP10.13□□□□□ -0.79
CCDC9-205ENST00000600117 C8orf87E5RJ46 101 aa10.12□□□□□ -0.79
CCDC9-205ENST00000600117 SEC61BP60468 96 aaKnown RBP10.11□□□□□ -0.79
CCDC9-205ENST00000600117 PRR15Q8IV56 129 aa10.11□□□□□ -0.79
CCDC9-205ENST00000600117 FAM240AA0A1B0GVK7 77 aa10.1□□□□□ -0.79
CCDC9-205ENST00000600117 K7EQZ3 153 aa10.09□□□□□ -0.79
CCDC9-205ENST00000600117 ACYP1P07311 99 aa10.09□□□□□ -0.79
CCDC9-205ENST00000600117 Q75L30 129 aa10.09□□□□□ -0.79
CCDC9-205ENST00000600117 C20orf166-AS1Q96NR2 134 aa10.09□□□□□ -0.79
CCDC9-205ENST00000600117 A8MUU9 505 aa10.08□□□□□ -0.8
CCDC9-205ENST00000600117 C8orf17Q9NRJ1 99 aa10.07□□□□□ -0.8
CCDC9-205ENST00000600117 PCOTHQ58A44 107 aa10.05□□□□□ -0.8
CCDC9-205ENST00000600117 Q8N9L7 120 aa10.04□□□□□ -0.8
CCDC9-205ENST00000600117 MMP24-AS1A0A0U1RRL7 71 aa10.02□□□□□ -0.81
CCDC9-205ENST00000600117 KRTAP4-1Q9BYQ7 146 aa10.01□□□□□ -0.81
CCDC9-205ENST00000600117 CXCL6P80162 114 aa9.98□□□□□ -0.81
CCDC9-205ENST00000600117 J3QR89 54 aa9.95□□□□□ -0.82
CCDC9-205ENST00000600117 Q8N9P0 234 aaPredicted RBP9.95□□□□□ -0.82
CCDC9-205ENST00000600117 TMEM254Q8TBM7 123 aa9.95□□□□□ -0.82
CCDC9-205ENST00000600117 ATP11AUNQ6ZP68 121 aa9.94□□□□□ -0.82
CCDC9-205ENST00000600117 hDV103S1A0JD37 113 aa9.92□□□□□ -0.82
CCDC9-205ENST00000600117 MRPL34Q9BQ48 92 aaKnown RBP9.92□□□□□ -0.82
CCDC9-205ENST00000600117 ATP5EP2Q5VTU8 51 aa9.91□□□□□ -0.82
CCDC9-205ENST00000600117 LINC00643Q86TS7 51 aa9.89□□□□□ -0.83
CCDC9-205ENST00000600117 WFDC13Q8IUB5 93 aa9.89□□□□□ -0.83
CCDC9-205ENST00000600117 CASC2Q6XLA1 102 aa9.88□□□□□ -0.83
CCDC9-205ENST00000600117 HCG22E2RYF7 251 aa9.87□□□□□ -0.83
CCDC9-205ENST00000600117 LCE2CQ5TA81 110 aa9.83□□□□□ -0.84
CCDC9-205ENST00000600117 ZCCHC13Q8WW36 166 aaKnown RBP9.83□□□□□ -0.84
CCDC9-205ENST00000600117 K7ERU9 68 aa9.81□□□□□ -0.84
CCDC9-205ENST00000600117 NDUFS5O43920 106 aa9.78□□□□□ -0.84
CCDC9-205ENST00000600117 HIST1H4AP62805 103 aaKnown RBP9.76□□□□□ -0.85
CCDC9-205ENST00000600117 MT1HP80294 61 aa9.75□□□□□ -0.85
CCDC9-205ENST00000600117 KRTAP19-2Q3LHN2 52 aa9.73□□□□□ -0.85
CCDC9-205ENST00000600117 A0A087WVE0 104 aa9.71□□□□□ -0.86
CCDC9-205ENST00000600117 KRTAP9-7A8MTY7 169 aa9.7□□□□□ -0.86
CCDC9-205ENST00000600117 LORP23490 312 aaPredicted RBP9.7□□□□□ -0.86
CCDC9-205ENST00000600117 Q5W150 140 aa9.7□□□□□ -0.86
CCDC9-205ENST00000600117 KRTAP10-6P60371 365 aaPredicted RBP9.66□□□□□ -0.86
CCDC9-205ENST00000600117 SPINK7P58062 85 aa9.65□□□□□ -0.86
CCDC9-205ENST00000600117 HRES1P13985 223 aa9.64□□□□□ -0.87
CCDC9-205ENST00000600117 TP53AIP1Q9HCN2 124 aa9.64□□□□□ -0.87
CCDC9-205ENST00000600117 MT-ATP8P03928 68 aa9.63□□□□□ -0.87
CCDC9-205ENST00000600117 FLGP20930 4061 aaPredicted RBP9.62□□□□□ -0.87
CCDC9-205ENST00000600117 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.62□□□□□ -0.87
CCDC9-205ENST00000600117 MPLKIPQ8TAP9 179 aa9.6□□□□□ -0.87
CCDC9-205ENST00000600117 IMUPQ9GZP8 106 aa9.58□□□□□ -0.88
CCDC9-205ENST00000600117 IGKV2D-30A0A075B6S6 120 aa9.54□□□□□ -0.88
CCDC9-205ENST00000600117 IGKV2-30P06310 120 aa9.54□□□□□ -0.88
CCDC9-205ENST00000600117 C7orf65Q6ZTY9 151 aa9.53□□□□□ -0.88
CCDC9-205ENST00000600117 M0R2T5 61 aa9.52□□□□□ -0.89
CCDC9-205ENST00000600117 COX6B2Q6YFQ2 88 aa9.52□□□□□ -0.89
CCDC9-205ENST00000600117 UQCRQO14949 82 aa9.51□□□□□ -0.89
CCDC9-205ENST00000600117 SSPOA2VEC9 5147 aa9.51□□□□□ -0.89
CCDC9-205ENST00000600117 OCR1Q9BZK8 76 aa9.5□□□□□ -0.89
CCDC9-205ENST00000600117 TRAV22A0A0B4J277 110 aa9.49□□□□□ -0.89
CCDC9-205ENST00000600117 USH2AO75445 5202 aa9.49□□□□□ -0.89
CCDC9-205ENST00000600117 RBM12B-AS1Q9P1G2 102 aa9.48□□□□□ -0.89
CCDC9-205ENST00000600117 H0Y9P7 68 aa9.43□□□□□ -0.9
CCDC9-205ENST00000600117 FAM236DA0A1B0GTK5 79 aa9.42□□□□□ -0.9
CCDC9-205ENST00000600117 FAM236CP0DP71 79 aa9.42□□□□□ -0.9
CCDC9-205ENST00000600117 SCGB1A1P11684 91 aa9.42□□□□□ -0.9
CCDC9-205ENST00000600117 FAM236AA0A1B0GUQ0 79 aa9.41□□□□□ -0.9
CCDC9-205ENST00000600117 FAM236BA0A1B0GV22 79 aa9.41□□□□□ -0.9
CCDC9-205ENST00000600117 FCGBPQ9Y6R7 5405 aaPredicted RBP9.4□□□□□ -0.91
CCDC9-205ENST00000600117 LOC101927531A0A1B0GV80 90 aa9.39□□□□□ -0.91
CCDC9-205ENST00000600117 ATOX1O00244 68 aa9.38□□□□□ -0.91
CCDC9-205ENST00000600117 CYP4F30PQ9H0H9 118 aa9.38□□□□□ -0.91
CCDC9-205ENST00000600117 C4orf26Q17RF5 130 aa9.34□□□□□ -0.91
CCDC9-205ENST00000600117 C5orf47Q569G3 176 aa9.34□□□□□ -0.91
CCDC9-205ENST00000600117 MP68P56378 58 aa9.31□□□□□ -0.92
CCDC9-205ENST00000600117 C1orf64Q8NEQ6 169 aa9.31□□□□□ -0.92
CCDC9-205ENST00000600117 LINC00208Q96KT6 92 aa9.31□□□□□ -0.92
CCDC9-205ENST00000600117 SMIM20Q8N5G0 67 aa9.29□□□□□ -0.92
CCDC9-205ENST00000600117 TRAV7A0A075B6U4 112 aa9.28□□□□□ -0.92
CCDC9-205ENST00000600117 H3BPC8 53 aa9.26□□□□□ -0.93
CCDC9-205ENST00000600117 KRTAP3-1Q9BYR8 98 aa9.26□□□□□ -0.93
CCDC9-205ENST00000600117 SYNE2Q8WXH0 6885 aaKnown RBP9.25□□□□□ -0.93
CCDC9-205ENST00000600117 MACF1Q9UPN3 7388 aaKnown RBP9.25□□□□□ -0.93
CCDC9-205ENST00000600117 H1FX-AS1Q4G0G2 97 aa9.25□□□□□ -0.93
CCDC9-205ENST00000600117 KLKP1Q107X0 134 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms