RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 NOTCH2NLQ7Z3S9 236 aa14.78□□□□□ -0.04
SSBP4-206ENST00000599699 A0A1B0GW54 56 aa14.77□□□□□ -0.05
SSBP4-206ENST00000599699 J3KT08 172 aa14.77□□□□□ -0.05
SSBP4-206ENST00000599699 A0A1B0GVX0 72 aa14.75□□□□□ -0.05
SSBP4-206ENST00000599699 KRTAP16-1A8MUX0 517 aa14.73□□□□□ -0.05
SSBP4-206ENST00000599699 COL5A1-AS1Q5SY13 56 aa14.73□□□□□ -0.05
SSBP4-206ENST00000599699 SPCS1Q9Y6A9 102 aa14.73□□□□□ -0.05
SSBP4-206ENST00000599699 C8orf87E5RJ46 101 aa14.71□□□□□ -0.05
SSBP4-206ENST00000599699 COX6B2Q6YFQ2 88 aa14.71□□□□□ -0.05
SSBP4-206ENST00000599699 NDUFB1O75438 58 aa14.68□□□□□ -0.06
SSBP4-206ENST00000599699 NREPQ16612 68 aa14.64□□□□□ -0.07
SSBP4-206ENST00000599699 MT1HP80294 61 aa14.62□□□□□ -0.07
SSBP4-206ENST00000599699 PCP4L1A6NKN8 68 aa14.59□□□□□ -0.07
SSBP4-206ENST00000599699 A8MWP4 228 aa14.59□□□□□ -0.07
SSBP4-206ENST00000599699 KRTAP9-2Q9BYQ4 174 aa14.59□□□□□ -0.07
SSBP4-206ENST00000599699 IGKV3D-7A0A0C4DH55 119 aa14.53□□□□□ -0.08
SSBP4-206ENST00000599699 SMCPP49901 116 aaPredicted RBP14.52□□□□□ -0.09
SSBP4-206ENST00000599699 C8orf17Q9NRJ1 99 aa14.52□□□□□ -0.09
SSBP4-206ENST00000599699 K7EP34 96 aa14.51□□□□□ -0.09
SSBP4-206ENST00000599699 M0R2T5 61 aa14.49□□□□□ -0.09
SSBP4-206ENST00000599699 PRR15Q8IV56 129 aa14.47□□□□□ -0.09
SSBP4-206ENST00000599699 PRO0461Q9UI25 63 aa14.44□□□□□ -0.1
SSBP4-206ENST00000599699 Q6ZVQ6 151 aa14.41□□□□□ -0.1
SSBP4-206ENST00000599699 ZCCHC13Q8WW36 166 aaKnown RBP14.41□□□□□ -0.1
SSBP4-206ENST00000599699 GTF2H5Q6ZYL4 71 aa14.4□□□□□ -0.1
SSBP4-206ENST00000599699 Q8N9P0 234 aaPredicted RBP14.4□□□□□ -0.1
SSBP4-206ENST00000599699 BPY2O14599 106 aa14.39□□□□□ -0.11
SSBP4-206ENST00000599699 K7EQZ3 153 aa14.36□□□□□ -0.11
SSBP4-206ENST00000599699 FLGP20930 4061 aaPredicted RBP14.35□□□□□ -0.11
SSBP4-206ENST00000599699 MMP24-AS1A0A0U1RRL7 71 aa14.33□□□□□ -0.12
SSBP4-206ENST00000599699 FAM236DA0A1B0GTK5 79 aa14.31□□□□□ -0.12
SSBP4-206ENST00000599699 FAM236CP0DP71 79 aa14.31□□□□□ -0.12
SSBP4-206ENST00000599699 KRTAP10-6P60371 365 aaPredicted RBP14.31□□□□□ -0.12
SSBP4-206ENST00000599699 TMEM254Q8TBM7 123 aa14.3□□□□□ -0.12
SSBP4-206ENST00000599699 MRPL34Q9BQ48 92 aaKnown RBP14.29□□□□□ -0.12
SSBP4-206ENST00000599699 RBM12B-AS1Q9P1G2 102 aa14.29□□□□□ -0.12
SSBP4-206ENST00000599699 KRTAP9-6A0A140TA67 174 aa14.27□□□□□ -0.13
SSBP4-206ENST00000599699 hDV103S1A0JD37 113 aa14.27□□□□□ -0.13
SSBP4-206ENST00000599699 HRES1P13985 223 aa14.27□□□□□ -0.13
SSBP4-206ENST00000599699 LORP23490 312 aaPredicted RBP14.26□□□□□ -0.13
SSBP4-206ENST00000599699 F8W1H4 67 aa14.25□□□□□ -0.13
SSBP4-206ENST00000599699 SPINK7P58062 85 aa14.24□□□□□ -0.13
SSBP4-206ENST00000599699 UBL5Q9BZL1 73 aa14.24□□□□□ -0.13
SSBP4-206ENST00000599699 LINC00846Q9NV44 126 aa14.23□□□□□ -0.13
SSBP4-206ENST00000599699 NDUFS5O43920 106 aa14.22□□□□□ -0.13
SSBP4-206ENST00000599699 Q8N9L7 120 aa14.22□□□□□ -0.13
SSBP4-206ENST00000599699 MPLKIPQ8TAP9 179 aa14.2□□□□□ -0.14
SSBP4-206ENST00000599699 ETDBQ3ZM63 59 aa14.17□□□□□ -0.14
SSBP4-206ENST00000599699 LCE2DQ5TA82 110 aaPredicted RBP14.17□□□□□ -0.14
SSBP4-206ENST00000599699 WFDC13Q8IUB5 93 aa14.15□□□□□ -0.14
SSBP4-206ENST00000599699 CASC2Q6XLA1 102 aa14.12□□□□□ -0.15
SSBP4-206ENST00000599699 HCG22E2RYF7 251 aa14.02□□□□□ -0.17
SSBP4-206ENST00000599699 Q5W150 140 aa13.95□□□□□ -0.18
SSBP4-206ENST00000599699 IGKV2D-30A0A075B6S6 120 aa13.94□□□□□ -0.18
SSBP4-206ENST00000599699 IGKV2-30P06310 120 aa13.94□□□□□ -0.18
SSBP4-206ENST00000599699 CXCL6P80162 114 aa13.92□□□□□ -0.18
SSBP4-206ENST00000599699 C7orf65Q6ZTY9 151 aa13.87□□□□□ -0.19
SSBP4-206ENST00000599699 KRTAP9-8Q9BYQ0 159 aa13.85□□□□□ -0.19
SSBP4-206ENST00000599699 ACYP1P07311 99 aa13.83□□□□□ -0.2
SSBP4-206ENST00000599699 FSIP2Q5CZC0 6907 aa13.76□□□□□ -0.21
SSBP4-206ENST00000599699 FAM240AA0A1B0GVK7 77 aa13.75□□□□□ -0.21
SSBP4-206ENST00000599699 A0A1B0GV90 55 aa13.74□□□□□ -0.21
SSBP4-206ENST00000599699 CRCT1Q9UGL9 99 aa13.72□□□□□ -0.21
SSBP4-206ENST00000599699 MT2AP02795 61 aa13.71□□□□□ -0.21
SSBP4-206ENST00000599699 H1FX-AS1Q4G0G2 97 aa13.71□□□□□ -0.21
SSBP4-206ENST00000599699 TP53AIP1Q9HCN2 124 aa13.71□□□□□ -0.21
SSBP4-206ENST00000599699 ATP5EP2Q5VTU8 51 aa13.66□□□□□ -0.22
SSBP4-206ENST00000599699 C4orf26Q17RF5 130 aa13.64□□□□□ -0.23
SSBP4-206ENST00000599699 KRTAP10-10P60014 251 aa13.62□□□□□ -0.23
SSBP4-206ENST00000599699 MT1FP04733 61 aa13.61□□□□□ -0.23
SSBP4-206ENST00000599699 HIST1H4AP62805 103 aaKnown RBP13.61□□□□□ -0.23
SSBP4-206ENST00000599699 LINC00643Q86TS7 51 aa13.51□□□□□ -0.25
SSBP4-206ENST00000599699 TRAV22A0A0B4J277 110 aa13.44□□□□□ -0.26
SSBP4-206ENST00000599699 C1orf64Q8NEQ6 169 aa13.43□□□□□ -0.26
SSBP4-206ENST00000599699 A0A087WVE0 104 aa13.41□□□□□ -0.26
SSBP4-206ENST00000599699 KRTAP9-3Q9BYQ3 159 aa13.41□□□□□ -0.26
SSBP4-206ENST00000599699 J3QR89 54 aa13.38□□□□□ -0.27
SSBP4-206ENST00000599699 KRTAP3-1Q9BYR8 98 aa13.38□□□□□ -0.27
SSBP4-206ENST00000599699 CYP4F30PQ9H0H9 118 aa13.38□□□□□ -0.27
SSBP4-206ENST00000599699 UQCRQO14949 82 aa13.36□□□□□ -0.27
SSBP4-206ENST00000599699 LOC101927531A0A1B0GV80 90 aa13.35□□□□□ -0.27
SSBP4-206ENST00000599699 USH2AO75445 5202 aa13.34□□□□□ -0.27
SSBP4-206ENST00000599699 S4R3F8 94 aa13.31□□□□□ -0.28
SSBP4-206ENST00000599699 H0Y9P7 68 aa13.3□□□□□ -0.28
SSBP4-206ENST00000599699 LCE2BO14633 110 aa13.3□□□□□ -0.28
SSBP4-206ENST00000599699 C5orf47Q569G3 176 aa13.29□□□□□ -0.28
SSBP4-206ENST00000599699 ATOX1O00244 68 aa13.27□□□□□ -0.29
SSBP4-206ENST00000599699 LCA10Q71F78 164 aa13.19□□□□□ -0.3
SSBP4-206ENST00000599699 CSAG1Q6PB30 78 aa13.17□□□□□ -0.3
SSBP4-206ENST00000599699 SSPOA2VEC9 5147 aa13.15□□□□□ -0.3
SSBP4-206ENST00000599699 LINC00208Q96KT6 92 aa13.11□□□□□ -0.31
SSBP4-206ENST00000599699 OCR1Q9BZK8 76 aa13.11□□□□□ -0.31
SSBP4-206ENST00000599699 MP68P56378 58 aa13.09□□□□□ -0.31
SSBP4-206ENST00000599699 FAM236AA0A1B0GUQ0 79 aa13.07□□□□□ -0.32
SSBP4-206ENST00000599699 FAM236BA0A1B0GV22 79 aa13.07□□□□□ -0.32
SSBP4-206ENST00000599699 SCGB1A1P11684 91 aa13.03□□□□□ -0.32
SSBP4-206ENST00000599699 KRTAP19-1Q8IUB9 90 aa13□□□□□ -0.33
SSBP4-206ENST00000599699 KLKP1Q107X0 134 aa12.98□□□□□ -0.33
SSBP4-206ENST00000599699 KRTAP3-3Q9BYR6 98 aa12.98□□□□□ -0.33
SSBP4-206ENST00000599699 K7ERU9 68 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms