RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 C8orf87E5RJ46 101 aa5.16□□□□□ -1.58
CHMP2A-202ENST00000596708 TMEM256-PLSCR3K7ERE1 68 aa5.16□□□□□ -1.58
CHMP2A-202ENST00000596708 S100A1P23297 94 aa5.15□□□□□ -1.59
CHMP2A-202ENST00000596708 PSMB2P49721 201 aa5.15□□□□□ -1.59
CHMP2A-202ENST00000596708 FXYD2P54710 66 aa5.15□□□□□ -1.59
CHMP2A-202ENST00000596708 VPS25Q9BRG1 176 aa5.15□□□□□ -1.59
CHMP2A-202ENST00000596708 A0A1B0GVX0 72 aa5.14□□□□□ -1.59
CHMP2A-202ENST00000596708 VAMP8Q9BV40 100 aa5.14□□□□□ -1.59
CHMP2A-202ENST00000596708 SPINK7P58062 85 aa5.13□□□□□ -1.59
CHMP2A-202ENST00000596708 ZCCHC13Q8WW36 166 aaKnown RBP5.13□□□□□ -1.59
CHMP2A-202ENST00000596708 COX6CP09669 75 aa5.12□□□□□ -1.59
CHMP2A-202ENST00000596708 UBE2V1Q13404 147 aa5.11□□□□□ -1.59
CHMP2A-202ENST00000596708 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
CHMP2A-202ENST00000596708 MACF1Q9UPN3 7388 aaKnown RBP5.11□□□□□ -1.59
CHMP2A-202ENST00000596708 A8MWP4 228 aa5.1□□□□□ -1.59
CHMP2A-202ENST00000596708 SYNE2Q8WXH0 6885 aaKnown RBP5.1□□□□□ -1.59
CHMP2A-202ENST00000596708 RBM3P98179 157 aaKnown RBP5.09□□□□□ -1.59
CHMP2A-202ENST00000596708 DSCR8Q96T75 97 aa5.09□□□□□ -1.59
CHMP2A-202ENST00000596708 J3KT08 172 aa5.08□□□□□ -1.6
CHMP2A-202ENST00000596708 K7ERJ3 54 aa5.08□□□□□ -1.6
CHMP2A-202ENST00000596708 LYRM7Q5U5X0 104 aa5.08□□□□□ -1.6
CHMP2A-202ENST00000596708 NDUFB1O75438 58 aa5.07□□□□□ -1.6
CHMP2A-202ENST00000596708 WFDC13Q8IUB5 93 aa5.07□□□□□ -1.6
CHMP2A-202ENST00000596708 HSD52Q0P140 79 aa5.06□□□□□ -1.6
CHMP2A-202ENST00000596708 Q8N9P0 234 aaPredicted RBP5.06□□□□□ -1.6
CHMP2A-202ENST00000596708 SCGB1C2P0DMR2 95 aa5.05□□□□□ -1.6
CHMP2A-202ENST00000596708 C21orf62-AS1Q17RA5 79 aa5.05□□□□□ -1.6
CHMP2A-202ENST00000596708 C9JAW5 83 aa5.04□□□□□ -1.6
CHMP2A-202ENST00000596708 Q6ZQT0 140 aa5.03□□□□□ -1.6
CHMP2A-202ENST00000596708 C8orf17Q9NRJ1 99 aa5.03□□□□□ -1.6
CHMP2A-202ENST00000596708 BAALC-AS2P0C853 105 aa5.01□□□□□ -1.61
CHMP2A-202ENST00000596708 IGKV3D-7A0A0C4DH55 119 aa4.99□□□□□ -1.61
CHMP2A-202ENST00000596708 KRTAP6-3Q3LI67 103 aa4.99□□□□□ -1.61
CHMP2A-202ENST00000596708 Q6ZVQ6 151 aa4.98□□□□□ -1.61
CHMP2A-202ENST00000596708 H1FX-AS1Q4G0G2 97 aa4.97□□□□□ -1.61
CHMP2A-202ENST00000596708 PYY3Q5JQD4 70 aa4.96□□□□□ -1.62
CHMP2A-202ENST00000596708 UQCR10Q9UDW1 63 aa4.96□□□□□ -1.62
CHMP2A-202ENST00000596708 JMJD7-PLA2G4BH0Y9G9 81 aa4.95□□□□□ -1.62
CHMP2A-202ENST00000596708 A0A1B0GW54 56 aa4.94□□□□□ -1.62
CHMP2A-202ENST00000596708 PRR15Q8IV56 129 aa4.94□□□□□ -1.62
CHMP2A-202ENST00000596708 MRPL34Q9BQ48 92 aaKnown RBP4.94□□□□□ -1.62
CHMP2A-202ENST00000596708 NDUFS5O43920 106 aa4.93□□□□□ -1.62
CHMP2A-202ENST00000596708 LOC110117498A0A087WWA1 95 aa4.92□□□□□ -1.62
CHMP2A-202ENST00000596708 ATXN8Q156A1 80 aa4.92□□□□□ -1.62
CHMP2A-202ENST00000596708 NREPQ16612 68 aa4.92□□□□□ -1.62
CHMP2A-202ENST00000596708 TMEM254Q8TBM7 123 aa4.92□□□□□ -1.62
CHMP2A-202ENST00000596708 MMP24-AS1A0A0U1RRL7 71 aa4.91□□□□□ -1.62
CHMP2A-202ENST00000596708 PDE6GP18545 87 aa4.91□□□□□ -1.62
CHMP2A-202ENST00000596708 IGKV2D-30A0A075B6S6 120 aa4.9□□□□□ -1.63
CHMP2A-202ENST00000596708 IGKV2-30P06310 120 aa4.9□□□□□ -1.63
CHMP2A-202ENST00000596708 C14orf132Q9NPU4 83 aa4.9□□□□□ -1.63
CHMP2A-202ENST00000596708 hDV103S1A0JD37 113 aa4.89□□□□□ -1.63
CHMP2A-202ENST00000596708 NAA38Q9BRA0 125 aaKnown RBP4.88□□□□□ -1.63
CHMP2A-202ENST00000596708 C7orf65Q6ZTY9 151 aa4.87□□□□□ -1.63
CHMP2A-202ENST00000596708 K7EQZ3 153 aa4.85□□□□□ -1.63
CHMP2A-202ENST00000596708 FAM236AA0A1B0GUQ0 79 aa4.84□□□□□ -1.63
CHMP2A-202ENST00000596708 FAM236BA0A1B0GV22 79 aa4.84□□□□□ -1.63
CHMP2A-202ENST00000596708 A6NN06 94 aa4.84□□□□□ -1.63
CHMP2A-202ENST00000596708 Q5W150 140 aa4.84□□□□□ -1.63
CHMP2A-202ENST00000596708 C4orf26Q17RF5 130 aa4.82□□□□□ -1.64
CHMP2A-202ENST00000596708 C5orf47Q569G3 176 aa4.82□□□□□ -1.64
CHMP2A-202ENST00000596708 M0R143 59 aa4.81□□□□□ -1.64
CHMP2A-202ENST00000596708 BPY2O14599 106 aa4.8□□□□□ -1.64
CHMP2A-202ENST00000596708 MUC12Q9UKN1 5478 aa4.79□□□□□ -1.64
CHMP2A-202ENST00000596708 HCG22E2RYF7 251 aa4.79□□□□□ -1.64
CHMP2A-202ENST00000596708 Q5VV11 94 aa4.79□□□□□ -1.64
CHMP2A-202ENST00000596708 KRTAP4-8Q9BYQ9 185 aa4.79□□□□□ -1.64
CHMP2A-202ENST00000596708 TMA7Q9Y2S6 64 aaKnown RBP4.78□□□□□ -1.64
CHMP2A-202ENST00000596708 MT1BP07438 61 aa4.77□□□□□ -1.65
CHMP2A-202ENST00000596708 CASC2Q6XLA1 102 aa4.77□□□□□ -1.65
CHMP2A-202ENST00000596708 NEBP20929 6669 aa4.77□□□□□ -1.65
CHMP2A-202ENST00000596708 CSAG1Q6PB30 78 aa4.75□□□□□ -1.65
CHMP2A-202ENST00000596708 Q8N9L7 120 aa4.75□□□□□ -1.65
CHMP2A-202ENST00000596708 S4R3F8 94 aa4.75□□□□□ -1.65
CHMP2A-202ENST00000596708 TSTD3H0UI37 97 aa4.74□□□□□ -1.65
CHMP2A-202ENST00000596708 CXCL6P80162 114 aa4.74□□□□□ -1.65
CHMP2A-202ENST00000596708 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
CHMP2A-202ENST00000596708 KRTAP19-8Q3LI54 63 aa4.73□□□□□ -1.65
CHMP2A-202ENST00000596708 H3BT86 120 aa4.72□□□□□ -1.65
CHMP2A-202ENST00000596708 SPRR2GQ9BYE4 73 aa4.72□□□□□ -1.65
CHMP2A-202ENST00000596708 KRTAP3-1Q9BYR8 98 aa4.72□□□□□ -1.65
CHMP2A-202ENST00000596708 KRTAP10-5P60370 271 aa4.71□□□□□ -1.66
CHMP2A-202ENST00000596708 BATFQ16520 125 aa4.71□□□□□ -1.66
CHMP2A-202ENST00000596708 C1orf64Q8NEQ6 169 aa4.71□□□□□ -1.66
CHMP2A-202ENST00000596708 LCA10Q71F78 164 aa4.7□□□□□ -1.66
CHMP2A-202ENST00000596708 KLKP1Q107X0 134 aa4.68□□□□□ -1.66
CHMP2A-202ENST00000596708 IMUPQ9GZP8 106 aa4.67□□□□□ -1.66
CHMP2A-202ENST00000596708 C9orf118A6NHY6 69 aa4.66□□□□□ -1.66
CHMP2A-202ENST00000596708 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
CHMP2A-202ENST00000596708 A0A1W2PPM0 123 aa4.64□□□□□ -1.67
CHMP2A-202ENST00000596708 UBL5Q9BZL1 73 aa4.63□□□□□ -1.67
CHMP2A-202ENST00000596708 TAX1BP3O14907 124 aa4.61□□□□□ -1.67
CHMP2A-202ENST00000596708 TP53AIP1Q9HCN2 124 aa4.6□□□□□ -1.67
CHMP2A-202ENST00000596708 SMIM6P0DI80 62 aa4.59□□□□□ -1.67
CHMP2A-202ENST00000596708 CRIPTQ9P021 101 aa4.59□□□□□ -1.67
CHMP2A-202ENST00000596708 KMT2DO14686 5537 aa4.57□□□□□ -1.68
CHMP2A-202ENST00000596708 LCE3BQ5TA77 95 aa4.57□□□□□ -1.68
CHMP2A-202ENST00000596708 SPCS1Q9Y6A9 102 aa4.57□□□□□ -1.68
CHMP2A-202ENST00000596708 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
CHMP2A-202ENST00000596708 SMCPP49901 116 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms