RNA–Protein interactions for RNA: ENST00000592052.1

TMEM259-208, Transcript of transmembrane protein 259, humanhuman

Gene TMEM259, Length 1,637 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-208ENST00000592052 Q6ZVQ6 151 aa13.5□□□□□ -0.25
TMEM259-208ENST00000592052 UBL5Q9BZL1 73 aa13.5□□□□□ -0.25
TMEM259-208ENST00000592052 IGHV6-1A0A0B4J1U7 121 aa13.48□□□□□ -0.25
TMEM259-208ENST00000592052 NDUFB1O75438 58 aa13.48□□□□□ -0.25
TMEM259-208ENST00000592052 A0A1B0GVX0 72 aa13.47□□□□□ -0.25
TMEM259-208ENST00000592052 DSCR10P59022 87 aa13.46□□□□□ -0.25
TMEM259-208ENST00000592052 A8MWP4 228 aa13.46□□□□□ -0.26
TMEM259-208ENST00000592052 LINC00313P59037 77 aa13.46□□□□□ -0.26
TMEM259-208ENST00000592052 BPY2O14599 106 aa13.44□□□□□ -0.26
TMEM259-208ENST00000592052 IGKV3D-7A0A0C4DH55 119 aa13.4□□□□□ -0.26
TMEM259-208ENST00000592052 C8orf87E5RJ46 101 aa13.4□□□□□ -0.26
TMEM259-208ENST00000592052 SEC61BP60468 96 aaKnown RBP13.39□□□□□ -0.27
TMEM259-208ENST00000592052 NOTCH2NLQ7Z3S9 236 aa13.39□□□□□ -0.27
TMEM259-208ENST00000592052 PRR15Q8IV56 129 aa13.37□□□□□ -0.27
TMEM259-208ENST00000592052 RPL37P61927 97 aaKnown RBP13.35□□□□□ -0.27
TMEM259-208ENST00000592052 Q75L30 129 aa13.33□□□□□ -0.28
TMEM259-208ENST00000592052 K7EQZ3 153 aa13.32□□□□□ -0.28
TMEM259-208ENST00000592052 KRTAP16-1A8MUX0 517 aa13.31□□□□□ -0.28
TMEM259-208ENST00000592052 C20orf166-AS1Q96NR2 134 aa13.31□□□□□ -0.28
TMEM259-208ENST00000592052 C8orf17Q9NRJ1 99 aa13.31□□□□□ -0.28
TMEM259-208ENST00000592052 A8MUU9 505 aa13.28□□□□□ -0.28
TMEM259-208ENST00000592052 LINC00643Q86TS7 51 aa13.28□□□□□ -0.28
TMEM259-208ENST00000592052 MUC17Q685J3 4493 aa13.27□□□□□ -0.29
TMEM259-208ENST00000592052 PCOTHQ58A44 107 aa13.26□□□□□ -0.29
TMEM259-208ENST00000592052 Q8N9L7 120 aa13.26□□□□□ -0.29
TMEM259-208ENST00000592052 CXCL6P80162 114 aa13.24□□□□□ -0.29
TMEM259-208ENST00000592052 RNF213Q63HN8 5207 aa13.24□□□□□ -0.29
TMEM259-208ENST00000592052 MT-ATP8P03928 68 aa13.24□□□□□ -0.29
TMEM259-208ENST00000592052 ATP11AUNQ6ZP68 121 aa13.23□□□□□ -0.29
TMEM259-208ENST00000592052 MMP24-AS1A0A0U1RRL7 71 aa13.22□□□□□ -0.29
TMEM259-208ENST00000592052 hDV103S1A0JD37 113 aa13.17□□□□□ -0.3
TMEM259-208ENST00000592052 MUC2Q02817 5179 aa13.15□□□□□ -0.3
TMEM259-208ENST00000592052 ATP5EP2Q5VTU8 51 aa13.15□□□□□ -0.3
TMEM259-208ENST00000592052 TMEM254Q8TBM7 123 aa13.15□□□□□ -0.3
TMEM259-208ENST00000592052 Q8N9P0 234 aaPredicted RBP13.14□□□□□ -0.31
TMEM259-208ENST00000592052 MRPL34Q9BQ48 92 aaKnown RBP13.12□□□□□ -0.31
TMEM259-208ENST00000592052 CASC2Q6XLA1 102 aa13.1□□□□□ -0.31
TMEM259-208ENST00000592052 WFDC13Q8IUB5 93 aa13.1□□□□□ -0.31
TMEM259-208ENST00000592052 KRTAP4-1Q9BYQ7 146 aa13.1□□□□□ -0.31
TMEM259-208ENST00000592052 HCG22E2RYF7 251 aa13.07□□□□□ -0.32
TMEM259-208ENST00000592052 IMUPQ9GZP8 106 aa13.06□□□□□ -0.32
TMEM259-208ENST00000592052 NDUFS5O43920 106 aa13.02□□□□□ -0.33
TMEM259-208ENST00000592052 ZCCHC13Q8WW36 166 aaKnown RBP13.01□□□□□ -0.33
TMEM259-208ENST00000592052 HIST1H4AP62805 103 aaKnown RBP12.99□□□□□ -0.33
TMEM259-208ENST00000592052 A0A087WVE0 104 aa12.91□□□□□ -0.34
TMEM259-208ENST00000592052 SCGB1A1P11684 91 aa12.91□□□□□ -0.34
TMEM259-208ENST00000592052 A0A0U1RQV1 116 aa12.91□□□□□ -0.34
TMEM259-208ENST00000592052 FAM236AA0A1B0GUQ0 79 aa12.84□□□□□ -0.35
TMEM259-208ENST00000592052 FAM236BA0A1B0GV22 79 aa12.84□□□□□ -0.35
TMEM259-208ENST00000592052 TP53AIP1Q9HCN2 124 aa12.81□□□□□ -0.36
TMEM259-208ENST00000592052 Q5W150 140 aa12.8□□□□□ -0.36
TMEM259-208ENST00000592052 SPINK7P58062 85 aa12.77□□□□□ -0.37
TMEM259-208ENST00000592052 KRTAP19-2Q3LHN2 52 aa12.7□□□□□ -0.38
TMEM259-208ENST00000592052 ATOX1O00244 68 aa12.68□□□□□ -0.38
TMEM259-208ENST00000592052 FAT4Q6V0I7 4981 aa12.67□□□□□ -0.38
TMEM259-208ENST00000592052 HRES1P13985 223 aa12.66□□□□□ -0.38
TMEM259-208ENST00000592052 COX6B2Q6YFQ2 88 aa12.66□□□□□ -0.38
TMEM259-208ENST00000592052 IGKV2D-30A0A075B6S6 120 aa12.65□□□□□ -0.38
TMEM259-208ENST00000592052 IGKV2-30P06310 120 aa12.65□□□□□ -0.38
TMEM259-208ENST00000592052 ANAPC13Q9BS18 74 aa12.65□□□□□ -0.38
TMEM259-208ENST00000592052 C7orf65Q6ZTY9 151 aa12.63□□□□□ -0.39
TMEM259-208ENST00000592052 PCP4P48539 62 aa12.62□□□□□ -0.39
TMEM259-208ENST00000592052 LCE2CQ5TA81 110 aa12.62□□□□□ -0.39
TMEM259-208ENST00000592052 UQCRQO14949 82 aa12.62□□□□□ -0.39
TMEM259-208ENST00000592052 RBM12B-AS1Q9P1G2 102 aa12.61□□□□□ -0.39
TMEM259-208ENST00000592052 MPLKIPQ8TAP9 179 aa12.6□□□□□ -0.39
TMEM259-208ENST00000592052 TRAV22A0A0B4J277 110 aa12.59□□□□□ -0.39
TMEM259-208ENST00000592052 SMIM20Q8N5G0 67 aa12.55□□□□□ -0.4
TMEM259-208ENST00000592052 OCR1Q9BZK8 76 aa12.54□□□□□ -0.4
TMEM259-208ENST00000592052 FAM236DA0A1B0GTK5 79 aa12.53□□□□□ -0.4
TMEM259-208ENST00000592052 FAM236CP0DP71 79 aa12.53□□□□□ -0.4
TMEM259-208ENST00000592052 SERP2Q8N6R1 65 aa12.51□□□□□ -0.41
TMEM259-208ENST00000592052 TRAV7A0A075B6U4 112 aa12.49□□□□□ -0.41
TMEM259-208ENST00000592052 H0Y9P7 68 aa12.49□□□□□ -0.41
TMEM259-208ENST00000592052 LCE2AQ5TA79 106 aaPredicted RBP12.48□□□□□ -0.41
TMEM259-208ENST00000592052 LOC101927531A0A1B0GV80 90 aa12.45□□□□□ -0.42
TMEM259-208ENST00000592052 COX7CP15954 63 aa12.45□□□□□ -0.42
TMEM259-208ENST00000592052 MT1HP80294 61 aa12.44□□□□□ -0.42
TMEM259-208ENST00000592052 CYP4F30PQ9H0H9 118 aa12.42□□□□□ -0.42
TMEM259-208ENST00000592052 MP68P56378 58 aa12.4□□□□□ -0.42
TMEM259-208ENST00000592052 C5orf47Q569G3 176 aa12.4□□□□□ -0.42
TMEM259-208ENST00000592052 C1orf64Q8NEQ6 169 aa12.37□□□□□ -0.43
TMEM259-208ENST00000592052 FLGP20930 4061 aaPredicted RBP12.37□□□□□ -0.43
TMEM259-208ENST00000592052 CCDC179H3BU77 68 aa12.37□□□□□ -0.43
TMEM259-208ENST00000592052 C4orf26Q17RF5 130 aa12.37□□□□□ -0.43
TMEM259-208ENST00000592052 LINC00208Q96KT6 92 aa12.35□□□□□ -0.43
TMEM259-208ENST00000592052 M0R2T5 61 aa12.32□□□□□ -0.44
TMEM259-208ENST00000592052 H3BPC8 53 aa12.29□□□□□ -0.44
TMEM259-208ENST00000592052 C20orf197Q8N268 126 aa12.28□□□□□ -0.44
TMEM259-208ENST00000592052 H1FX-AS1Q4G0G2 97 aa12.25□□□□□ -0.45
TMEM259-208ENST00000592052 SNURFQ9Y675 71 aa12.2□□□□□ -0.46
TMEM259-208ENST00000592052 KLKP1Q107X0 134 aa12.18□□□□□ -0.46
TMEM259-208ENST00000592052 KRTAP3-1Q9BYR8 98 aa12.16□□□□□ -0.46
TMEM259-208ENST00000592052 CYSTM1Q9H1C7 97 aa12.12□□□□□ -0.47
TMEM259-208ENST00000592052 KRTAP10-6P60371 365 aaPredicted RBP12.11□□□□□ -0.47
TMEM259-208ENST00000592052 LORP23490 312 aaPredicted RBP12.06□□□□□ -0.48
TMEM259-208ENST00000592052 NDUFC1O43677 76 aa12.04□□□□□ -0.48
TMEM259-208ENST00000592052 H7BZZ5 65 aa12□□□□□ -0.49
TMEM259-208ENST00000592052 A8MUN3 132 aa11.99□□□□□ -0.49
TMEM259-208ENST00000592052 S4R3F8 94 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms