RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 FAM229BQ4G0N7 80 aa11.49□□□□□ -0.57
MBD3-209ENST00000592012 NOTCH2NLQ7Z3S9 236 aa11.49□□□□□ -0.57
MBD3-209ENST00000592012 SPINK6Q6UWN8 80 aa11.49□□□□□ -0.57
MBD3-209ENST00000592012 KRTAP1-4P0C5Y4 121 aa11.47□□□□□ -0.57
MBD3-209ENST00000592012 Q5XG85 94 aa11.47□□□□□ -0.57
MBD3-209ENST00000592012 TP53AIP1Q9HCN2 124 aa11.46□□□□□ -0.57
MBD3-209ENST00000592012 C1orf64Q8NEQ6 169 aa11.44□□□□□ -0.58
MBD3-209ENST00000592012 MRPL34Q9BQ48 92 aaKnown RBP11.44□□□□□ -0.58
MBD3-209ENST00000592012 DYNC1H1Q14204 4646 aaKnown RBP11.44□□□□□ -0.58
MBD3-209ENST00000592012 SMIM26A0A096LP01 95 aa11.42□□□□□ -0.58
MBD3-209ENST00000592012 LINC00336Q6ZUF6 198 aa11.41□□□□□ -0.58
MBD3-209ENST00000592012 NDUFS5O43920 106 aa11.4□□□□□ -0.58
MBD3-209ENST00000592012 FP248Q71RG6 208 aaPredicted RBP11.4□□□□□ -0.58
MBD3-209ENST00000592012 C4orf26Q17RF5 130 aa11.39□□□□□ -0.59
MBD3-209ENST00000592012 CYP4F30PQ9H0H9 118 aa11.39□□□□□ -0.59
MBD3-209ENST00000592012 PRR4Q16378 134 aa11.37□□□□□ -0.59
MBD3-209ENST00000592012 PLA2G1BP04054 148 aaKnown RBP11.36□□□□□ -0.59
MBD3-209ENST00000592012 KMT2CQ8NEZ4 4911 aaKnown RBP11.36□□□□□ -0.59
MBD3-209ENST00000592012 C1orf195Q5TG92 126 aa11.35□□□□□ -0.59
MBD3-209ENST00000592012 SPANXA2-OT1Q8N9U9 137 aa11.34□□□□□ -0.59
MBD3-209ENST00000592012 A0A1B0GVY2 172 aa11.33□□□□□ -0.6
MBD3-209ENST00000592012 C8orf87E5RJ46 101 aa11.31□□□□□ -0.6
MBD3-209ENST00000592012 APOBP04114 4563 aaKnown RBP11.31□□□□□ -0.6
MBD3-209ENST00000592012 RYR2Q92736 4967 aa11.31□□□□□ -0.6
MBD3-209ENST00000592012 FAT1Q14517 4588 aa11.29□□□□□ -0.6
MBD3-209ENST00000592012 TYMSOSQ8TAI1 123 aa11.28□□□□□ -0.6
MBD3-209ENST00000592012 LINC00313P59037 77 aa11.27□□□□□ -0.61
MBD3-209ENST00000592012 LIMD2Q9BT23 127 aa11.27□□□□□ -0.61
MBD3-209ENST00000592012 SMR3BP02814 79 aaPredicted RBP11.26□□□□□ -0.61
MBD3-209ENST00000592012 Q5W150 140 aa11.25□□□□□ -0.61
MBD3-209ENST00000592012 C4orf48Q5BLP8 95 aa11.24□□□□□ -0.61
MBD3-209ENST00000592012 PCOTHQ58A44 107 aa11.24□□□□□ -0.61
MBD3-209ENST00000592012 KRTAP13-3Q3SY46 172 aa11.23□□□□□ -0.61
MBD3-209ENST00000592012 IGLV7-46A0A075B6I9 117 aa11.23□□□□□ -0.61
MBD3-209ENST00000592012 SPINK1P00995 79 aa11.22□□□□□ -0.61
MBD3-209ENST00000592012 MPLKIPQ8TAP9 179 aa11.2□□□□□ -0.62
MBD3-209ENST00000592012 PRR26Q8N8Z3 221 aa11.2□□□□□ -0.62
MBD3-209ENST00000592012 Q8N9P0 234 aaPredicted RBP11.19□□□□□ -0.62
MBD3-209ENST00000592012 KRTAP10-4P60372 401 aaPredicted RBP11.16□□□□□ -0.62
MBD3-209ENST00000592012 LOC101927531A0A1B0GV80 90 aa11.16□□□□□ -0.62
MBD3-209ENST00000592012 KRTAP16-1A8MUX0 517 aa11.15□□□□□ -0.62
MBD3-209ENST00000592012 RYR3Q15413 4870 aa11.14□□□□□ -0.63
MBD3-209ENST00000592012 LINC00304Q8N9R0 145 aa11.13□□□□□ -0.63
MBD3-209ENST00000592012 PKHD1L1Q86WI1 4243 aa11.13□□□□□ -0.63
MBD3-209ENST00000592012 RPS29P62273 56 aaKnown RBP11.1□□□□□ -0.63
MBD3-209ENST00000592012 Q1T7F1 81 aa11.1□□□□□ -0.63
MBD3-209ENST00000592012 FAM229AH3BQW9 127 aa11.09□□□□□ -0.63
MBD3-209ENST00000592012 SPAG11AQ6PDA7 123 aa11.09□□□□□ -0.63
MBD3-209ENST00000592012 COA5Q86WW8 74 aa11.05□□□□□ -0.64
MBD3-209ENST00000592012 RETNLBQ9BQ08 111 aa11.04□□□□□ -0.64
MBD3-209ENST00000592012 IGKV2-30P06310 120 aa10.97□□□□□ -0.65
MBD3-209ENST00000592012 HRES1P13985 223 aa10.96□□□□□ -0.65
MBD3-209ENST00000592012 V9GYY9 64 aa10.95□□□□□ -0.66
MBD3-209ENST00000592012 PSPHP1O15172 72 aa10.92□□□□□ -0.66
MBD3-209ENST00000592012 HSPG2P98160 4391 aa10.92□□□□□ -0.66
MBD3-209ENST00000592012 A8MUN3 132 aa10.87□□□□□ -0.67
MBD3-209ENST00000592012 LRP1Q07954 4544 aaKnown RBP10.85□□□□□ -0.67
MBD3-209ENST00000592012 TNXBP22105 4242 aa10.85□□□□□ -0.67
MBD3-209ENST00000592012 IGKV2D-30A0A075B6S6 120 aa10.85□□□□□ -0.67
MBD3-209ENST00000592012 DMAC1Q96GE9 116 aa10.85□□□□□ -0.67
MBD3-209ENST00000592012 ACYP2P14621 99 aa10.84□□□□□ -0.67
MBD3-209ENST00000592012 BRK1Q8WUW1 75 aa10.83□□□□□ -0.68
MBD3-209ENST00000592012 PRO0628Q9UI54 55 aa10.83□□□□□ -0.68
MBD3-209ENST00000592012 FLG2Q5D862 2391 aaPredicted RBP10.82□□□□□ -0.68
MBD3-209ENST00000592012 Q5VV11 94 aa10.81□□□□□ -0.68
MBD3-209ENST00000592012 C9orf92A6NGG3 77 aa10.8□□□□□ -0.68
MBD3-209ENST00000592012 RYR1P21817 5038 aa10.78□□□□□ -0.68
MBD3-209ENST00000592012 PRR15LQ9BU68 103 aa10.77□□□□□ -0.68
MBD3-209ENST00000592012 Q5VSD8 79 aa10.76□□□□□ -0.69
MBD3-209ENST00000592012 C20orf166-AS1Q96NR2 134 aa10.76□□□□□ -0.69
MBD3-209ENST00000592012 FAT3Q8TDW7 4589 aa10.76□□□□□ -0.69
MBD3-209ENST00000592012 EPPK1P58107 5090 aaKnown RBP10.75□□□□□ -0.69
MBD3-209ENST00000592012 A8MUU9 505 aa10.75□□□□□ -0.69
MBD3-209ENST00000592012 Q8N1X5 172 aa10.75□□□□□ -0.69
MBD3-209ENST00000592012 LINC01558Q9Y6Z2 57 aa10.75□□□□□ -0.69
MBD3-209ENST00000592012 KRTAP10-8P60410 259 aa10.73□□□□□ -0.69
MBD3-209ENST00000592012 C7orf65Q6ZTY9 151 aa10.72□□□□□ -0.69
MBD3-209ENST00000592012 CHKB-CPT1BH3BT56 60 aa10.68□□□□□ -0.7
MBD3-209ENST00000592012 Q75L30 129 aa10.68□□□□□ -0.7
MBD3-209ENST00000592012 KRTAP17-1Q9BYP8 105 aa10.67□□□□□ -0.7
MBD3-209ENST00000592012 KIAA1109Q2LD37 5005 aa10.64□□□□□ -0.71
MBD3-209ENST00000592012 DMBT1Q9UGM3 2413 aaPredicted RBP10.62□□□□□ -0.71
MBD3-209ENST00000592012 MYCBP2O75592 4640 aa10.56□□□□□ -0.72
MBD3-209ENST00000592012 A8MU10 97 aa10.55□□□□□ -0.72
MBD3-209ENST00000592012 A6NED7 52 aa10.54□□□□□ -0.72
MBD3-209ENST00000592012 SPINK7P58062 85 aa10.52□□□□□ -0.73
MBD3-209ENST00000592012 LCA10Q71F78 164 aa10.49□□□□□ -0.73
MBD3-209ENST00000592012 MT1HL1P0DM35 61 aa10.46□□□□□ -0.74
MBD3-209ENST00000592012 KRTAP3-1Q9BYR8 98 aa10.44□□□□□ -0.74
MBD3-209ENST00000592012 A0A1B0GU69 56 aa10.43□□□□□ -0.74
MBD3-209ENST00000592012 CDC42SE1Q9NRR8 79 aa10.41□□□□□ -0.74
MBD3-209ENST00000592012 ATP11AUNQ6ZP68 121 aa10.39□□□□□ -0.75
MBD3-209ENST00000592012 RPL37P61927 97 aaKnown RBP10.37□□□□□ -0.75
MBD3-209ENST00000592012 BIRC6Q9NR09 4857 aa10.36□□□□□ -0.75
MBD3-209ENST00000592012 XP32Q5T750 250 aa10.36□□□□□ -0.75
MBD3-209ENST00000592012 COX6B2Q6YFQ2 88 aa10.3□□□□□ -0.76
MBD3-209ENST00000592012 SPTSSBQ8NFR3 76 aa10.3□□□□□ -0.76
MBD3-209ENST00000592012 KRTAP4-5Q9BYR2 181 aa10.25□□□□□ -0.77
MBD3-209ENST00000592012 PMAIP1Q13794 54 aa10.25□□□□□ -0.77
MBD3-209ENST00000592012 UQCR11O14957 56 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms