RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 TRACP01848 142 aa4.18□□□□□ -1.74
VMP1-213ENST00000591877 MOBPQ13875 183 aa4.18□□□□□ -1.74
VMP1-213ENST00000591877 KRTAP13-3Q3SY46 172 aa4.18□□□□□ -1.74
VMP1-213ENST00000591877 FP248Q71RG6 208 aaPredicted RBP4.18□□□□□ -1.74
VMP1-213ENST00000591877 ST20-AS1Q8NBB2 130 aa4.18□□□□□ -1.74
VMP1-213ENST00000591877 CLEC2BQ92478 149 aa4.18□□□□□ -1.74
VMP1-213ENST00000591877 A0A1B0GX51 115 aa4.17□□□□□ -1.74
VMP1-213ENST00000591877 C9JAW5 83 aa4.17□□□□□ -1.74
VMP1-213ENST00000591877 SLC25A20O43772 301 aa4.17□□□□□ -1.74
VMP1-213ENST00000591877 SSBP3-AS1Q7Z2R9 100 aa4.17□□□□□ -1.74
VMP1-213ENST00000591877 FAT4Q6V0I7 4981 aa4.16□□□□□ -1.74
VMP1-213ENST00000591877 TRBV7-6A0A0J9YX20 115 aa4.15□□□□□ -1.75
VMP1-213ENST00000591877 A0A0U1RQV1 116 aa4.15□□□□□ -1.75
VMP1-213ENST00000591877 RPS29P62273 56 aaKnown RBP4.15□□□□□ -1.75
VMP1-213ENST00000591877 TEN1Q86WV5 123 aa4.15□□□□□ -1.75
VMP1-213ENST00000591877 ANKRD29Q8N6D5 301 aa4.15□□□□□ -1.75
VMP1-213ENST00000591877 K7ERU9 68 aa4.14□□□□□ -1.75
VMP1-213ENST00000591877 SNCGO76070 127 aa4.14□□□□□ -1.75
VMP1-213ENST00000591877 DNAL4O96015 105 aa4.14□□□□□ -1.75
VMP1-213ENST00000591877 SPRR1BP22528 89 aa4.14□□□□□ -1.75
VMP1-213ENST00000591877 ETDBQ3ZM63 59 aa4.14□□□□□ -1.75
VMP1-213ENST00000591877 C6orf99Q4VX62 202 aa4.14□□□□□ -1.75
VMP1-213ENST00000591877 OCIAD2Q56VL3 154 aa4.14□□□□□ -1.75
VMP1-213ENST00000591877 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
VMP1-213ENST00000591877 J3QR89 54 aa4.13□□□□□ -1.75
VMP1-213ENST00000591877 C9orf153Q5TBE3 101 aa4.13□□□□□ -1.75
VMP1-213ENST00000591877 PPDPFLQ8WWR9 84 aa4.13□□□□□ -1.75
VMP1-213ENST00000591877 V9GYY9 64 aa4.13□□□□□ -1.75
VMP1-213ENST00000591877 A8MU10 97 aa4.12□□□□□ -1.75
VMP1-213ENST00000591877 ELOF1P60002 83 aaKnown RBP4.12□□□□□ -1.75
VMP1-213ENST00000591877 ASB16-AS1Q495Z4 193 aa4.12□□□□□ -1.75
VMP1-213ENST00000591877 LINC00575Q6W349 94 aa4.12□□□□□ -1.75
VMP1-213ENST00000591877 H3BQ85 93 aa4.11□□□□□ -1.75
VMP1-213ENST00000591877 COX7BP24311 80 aa4.11□□□□□ -1.75
VMP1-213ENST00000591877 hADV29S1A0JD25 119 aa4.1□□□□□ -1.75
VMP1-213ENST00000591877 BAALC-AS2P0C853 105 aa4.1□□□□□ -1.75
VMP1-213ENST00000591877 ORMDL1Q9P0S3 153 aa4.1□□□□□ -1.75
VMP1-213ENST00000591877 A0A1B0GVX0 72 aa4.09□□□□□ -1.75
VMP1-213ENST00000591877 HRCT1Q6UXD1 115 aa4.09□□□□□ -1.75
VMP1-213ENST00000591877 TMEM256-PLSCR3K7ERE1 68 aa4.08□□□□□ -1.76
VMP1-213ENST00000591877 LCE3AQ5TA76 89 aa4.08□□□□□ -1.76
VMP1-213ENST00000591877 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.08□□□□□ -1.76
VMP1-213ENST00000591877 IGLV5-48A0A075B6I7 105 aa4.07□□□□□ -1.76
VMP1-213ENST00000591877 TEX49A0A1B0GTD5 131 aa4.07□□□□□ -1.76
VMP1-213ENST00000591877 Q6ZQY7 126 aa4.07□□□□□ -1.76
VMP1-213ENST00000591877 DEFB105AQ8NG35 78 aa4.07□□□□□ -1.76
VMP1-213ENST00000591877 LAMTOR3Q9UHA4 124 aa4.07□□□□□ -1.76
VMP1-213ENST00000591877 A0A0G2JQZ4 141 aa4.06□□□□□ -1.76
VMP1-213ENST00000591877 FAM240AA0A1B0GVK7 77 aa4.06□□□□□ -1.76
VMP1-213ENST00000591877 JMJD7-PLA2G4BH0Y9G9 81 aa4.06□□□□□ -1.76
VMP1-213ENST00000591877 OBSCN-AS1Q96MR7 158 aa4.06□□□□□ -1.76
VMP1-213ENST00000591877 CD164Q04900 197 aa4.05□□□□□ -1.76
VMP1-213ENST00000591877 LIMD2Q9BT23 127 aa4.05□□□□□ -1.76
VMP1-213ENST00000591877 SMIM26A0A096LP01 95 aa4.04□□□□□ -1.76
VMP1-213ENST00000591877 PSPHP1O15172 72 aa4.04□□□□□ -1.76
VMP1-213ENST00000591877 VPS25Q9BRG1 176 aa4.04□□□□□ -1.76
VMP1-213ENST00000591877 C9orf92A6NGG3 77 aa4.03□□□□□ -1.76
VMP1-213ENST00000591877 BPY2O14599 106 aa4.03□□□□□ -1.76
VMP1-213ENST00000591877 ACYP1P07311 99 aa4.03□□□□□ -1.76
VMP1-213ENST00000591877 KRTAP19-2Q3LHN2 52 aa4.03□□□□□ -1.76
VMP1-213ENST00000591877 Q5XG85 94 aa4.03□□□□□ -1.76
VMP1-213ENST00000591877 PDE6GP18545 87 aa4.02□□□□□ -1.77
VMP1-213ENST00000591877 C1orf195Q5TG92 126 aa4.02□□□□□ -1.77
VMP1-213ENST00000591877 LOC110117498A0A087WWA1 95 aa4.01□□□□□ -1.77
VMP1-213ENST00000591877 RBM3P98179 157 aaKnown RBP4.01□□□□□ -1.77
VMP1-213ENST00000591877 PCOTHQ58A44 107 aa4.01□□□□□ -1.77
VMP1-213ENST00000591877 C14orf132Q9NPU4 83 aa4.01□□□□□ -1.77
VMP1-213ENST00000591877 CCKP06307 115 aa4□□□□□ -1.77
VMP1-213ENST00000591877 DEFB116Q30KQ4 102 aa4□□□□□ -1.77
VMP1-213ENST00000591877 TRBV7-4A0A0J9YYF1 115 aa3.99□□□□□ -1.77
VMP1-213ENST00000591877 DSCR8Q96T75 97 aa3.99□□□□□ -1.77
VMP1-213ENST00000591877 Q6ZQT0 140 aa3.98□□□□□ -1.77
VMP1-213ENST00000591877 A0A1B0GV72 72 aa3.97□□□□□ -1.77
VMP1-213ENST00000591877 IGFL1Q6UW32 110 aa3.97□□□□□ -1.77
VMP1-213ENST00000591877 SIGMAR1Q99720 223 aa3.97□□□□□ -1.77
VMP1-213ENST00000591877 RPL37P61927 97 aaKnown RBP3.96□□□□□ -1.78
VMP1-213ENST00000591877 MT1HP80294 61 aa3.96□□□□□ -1.78
VMP1-213ENST00000591877 Q8N9L7 120 aa3.96□□□□□ -1.78
VMP1-213ENST00000591877 TRBV7-7A0A0K0K1E9 115 aa3.95□□□□□ -1.78
VMP1-213ENST00000591877 A0A1B0GW54 56 aa3.95□□□□□ -1.78
VMP1-213ENST00000591877 F8WEM9 126 aa3.95□□□□□ -1.78
VMP1-213ENST00000591877 Q5W150 140 aa3.95□□□□□ -1.78
VMP1-213ENST00000591877 LINC00643Q86TS7 51 aa3.95□□□□□ -1.78
VMP1-213ENST00000591877 C8orf17Q9NRJ1 99 aa3.95□□□□□ -1.78
VMP1-213ENST00000591877 IGHV6-1A0A0B4J1U7 121 aa3.94□□□□□ -1.78
VMP1-213ENST00000591877 MT-ATP8P03928 68 aa3.94□□□□□ -1.78
VMP1-213ENST00000591877 Q6JHZ5 121 aa3.94□□□□□ -1.78
VMP1-213ENST00000591877 UBL5Q9BZL1 73 aa3.94□□□□□ -1.78
VMP1-213ENST00000591877 LINC00846Q9NV44 126 aa3.94□□□□□ -1.78
VMP1-213ENST00000591877 SCGB1A1P11684 91 aa3.93□□□□□ -1.78
VMP1-213ENST00000591877 ATP5EP2Q5VTU8 51 aa3.93□□□□□ -1.78
VMP1-213ENST00000591877 Q6Q795 121 aa3.93□□□□□ -1.78
VMP1-213ENST00000591877 IMUPQ9GZP8 106 aa3.92□□□□□ -1.78
VMP1-213ENST00000591877 NDUFS5O43920 106 aa3.91□□□□□ -1.78
VMP1-213ENST00000591877 A0A1W2PNM2 257 aa3.9□□□□□ -1.79
VMP1-213ENST00000591877 PRO0628Q9UI54 55 aa3.89□□□□□ -1.79
VMP1-213ENST00000591877 NREPQ16612 68 aa3.87□□□□□ -1.79
VMP1-213ENST00000591877 Q96NJ1 140 aa3.87□□□□□ -1.79
VMP1-213ENST00000591877 FLGP20930 4061 aaPredicted RBP3.86□□□□□ -1.79
VMP1-213ENST00000591877 FSIP2Q5CZC0 6907 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms