RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 IGHV6-1A0A0B4J1U7 121 aa8.33□□□□□ -1.08
ATG4D-211ENST00000589753 A0A1B0GVX0 72 aa8.33□□□□□ -1.08
ATG4D-211ENST00000589753 DSCR10P59022 87 aa8.32□□□□□ -1.08
ATG4D-211ENST00000589753 IGKV3D-7A0A0C4DH55 119 aa8.31□□□□□ -1.08
ATG4D-211ENST00000589753 LINC00313P59037 77 aa8.3□□□□□ -1.08
ATG4D-211ENST00000589753 XP32Q5T750 250 aa8.3□□□□□ -1.08
ATG4D-211ENST00000589753 C8orf87E5RJ46 101 aa8.29□□□□□ -1.08
ATG4D-211ENST00000589753 PRR15Q8IV56 129 aa8.29□□□□□ -1.08
ATG4D-211ENST00000589753 K7EQZ3 153 aa8.28□□□□□ -1.08
ATG4D-211ENST00000589753 CXCL6P80162 114 aa8.27□□□□□ -1.09
ATG4D-211ENST00000589753 NOTCH2NLQ7Z3S9 236 aa8.27□□□□□ -1.09
ATG4D-211ENST00000589753 LPAP08519 4548 aa8.26□□□□□ -1.09
ATG4D-211ENST00000589753 K7ERU9 68 aa8.26□□□□□ -1.09
ATG4D-211ENST00000589753 Q8N9L7 120 aa8.25□□□□□ -1.09
ATG4D-211ENST00000589753 UBR4Q5T4S7 5183 aa8.25□□□□□ -1.09
ATG4D-211ENST00000589753 C8orf17Q9NRJ1 99 aa8.24□□□□□ -1.09
ATG4D-211ENST00000589753 ATP5EP2Q5VTU8 51 aa8.23□□□□□ -1.09
ATG4D-211ENST00000589753 LINC00643Q86TS7 51 aa8.23□□□□□ -1.09
ATG4D-211ENST00000589753 KRTAP16-1A8MUX0 517 aa8.22□□□□□ -1.09
ATG4D-211ENST00000589753 MMP24-AS1A0A0U1RRL7 71 aa8.2□□□□□ -1.1
ATG4D-211ENST00000589753 RPL37P61927 97 aaKnown RBP8.19□□□□□ -1.1
ATG4D-211ENST00000589753 LRP2P98164 4655 aa8.19□□□□□ -1.1
ATG4D-211ENST00000589753 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
ATG4D-211ENST00000589753 Q75L30 129 aa8.18□□□□□ -1.1
ATG4D-211ENST00000589753 A8MUU9 505 aa8.17□□□□□ -1.1
ATG4D-211ENST00000589753 hDV103S1A0JD37 113 aa8.16□□□□□ -1.1
ATG4D-211ENST00000589753 SEC61BP60468 96 aaKnown RBP8.16□□□□□ -1.1
ATG4D-211ENST00000589753 TMEM254Q8TBM7 123 aa8.15□□□□□ -1.1
ATG4D-211ENST00000589753 CASC2Q6XLA1 102 aa8.14□□□□□ -1.11
ATG4D-211ENST00000589753 WFDC13Q8IUB5 93 aa8.14□□□□□ -1.11
ATG4D-211ENST00000589753 HCG22E2RYF7 251 aa8.13□□□□□ -1.11
ATG4D-211ENST00000589753 HIST1H4AP62805 103 aaKnown RBP8.13□□□□□ -1.11
ATG4D-211ENST00000589753 MRPL34Q9BQ48 92 aaKnown RBP8.13□□□□□ -1.11
ATG4D-211ENST00000589753 Q8N9P0 234 aaPredicted RBP8.12□□□□□ -1.11
ATG4D-211ENST00000589753 ATP11AUNQ6ZP68 121 aa8.11□□□□□ -1.11
ATG4D-211ENST00000589753 PCOTHQ58A44 107 aa8.1□□□□□ -1.11
ATG4D-211ENST00000589753 NDUFS5O43920 106 aa8.07□□□□□ -1.12
ATG4D-211ENST00000589753 A0A087WVE0 104 aa8.05□□□□□ -1.12
ATG4D-211ENST00000589753 MT-ATP8P03928 68 aa8.03□□□□□ -1.12
ATG4D-211ENST00000589753 ZCCHC13Q8WW36 166 aaKnown RBP8.02□□□□□ -1.13
ATG4D-211ENST00000589753 IMUPQ9GZP8 106 aa8□□□□□ -1.13
ATG4D-211ENST00000589753 MUC17Q685J3 4493 aa8□□□□□ -1.13
ATG4D-211ENST00000589753 KRTAP4-1Q9BYQ7 146 aa7.98□□□□□ -1.13
ATG4D-211ENST00000589753 TP53AIP1Q9HCN2 124 aa7.96□□□□□ -1.14
ATG4D-211ENST00000589753 RNF213Q63HN8 5207 aa7.92□□□□□ -1.14
ATG4D-211ENST00000589753 Q5W150 140 aa7.92□□□□□ -1.14
ATG4D-211ENST00000589753 SCGB1A1P11684 91 aa7.88□□□□□ -1.15
ATG4D-211ENST00000589753 UQCRQO14949 82 aa7.86□□□□□ -1.15
ATG4D-211ENST00000589753 SPINK7P58062 85 aa7.86□□□□□ -1.15
ATG4D-211ENST00000589753 FAM236AA0A1B0GUQ0 79 aa7.85□□□□□ -1.15
ATG4D-211ENST00000589753 FAM236BA0A1B0GV22 79 aa7.85□□□□□ -1.15
ATG4D-211ENST00000589753 OCR1Q9BZK8 76 aa7.84□□□□□ -1.15
ATG4D-211ENST00000589753 TRAV22A0A0B4J277 110 aa7.83□□□□□ -1.16
ATG4D-211ENST00000589753 MUC2Q02817 5179 aa7.82□□□□□ -1.16
ATG4D-211ENST00000589753 IGKV2D-30A0A075B6S6 120 aa7.81□□□□□ -1.16
ATG4D-211ENST00000589753 IGKV2-30P06310 120 aa7.81□□□□□ -1.16
ATG4D-211ENST00000589753 C7orf65Q6ZTY9 151 aa7.81□□□□□ -1.16
ATG4D-211ENST00000589753 A0A0U1RQV1 116 aa7.78□□□□□ -1.16
ATG4D-211ENST00000589753 H0Y9P7 68 aa7.78□□□□□ -1.16
ATG4D-211ENST00000589753 HRES1P13985 223 aa7.78□□□□□ -1.16
ATG4D-211ENST00000589753 ATOX1O00244 68 aa7.77□□□□□ -1.17
ATG4D-211ENST00000589753 LCE2DQ5TA82 110 aaPredicted RBP7.77□□□□□ -1.17
ATG4D-211ENST00000589753 SMIM20Q8N5G0 67 aa7.77□□□□□ -1.17
ATG4D-211ENST00000589753 C5orf47Q569G3 176 aa7.75□□□□□ -1.17
ATG4D-211ENST00000589753 LOC101927531A0A1B0GV80 90 aa7.74□□□□□ -1.17
ATG4D-211ENST00000589753 MP68P56378 58 aa7.74□□□□□ -1.17
ATG4D-211ENST00000589753 RBM12B-AS1Q9P1G2 102 aa7.73□□□□□ -1.17
ATG4D-211ENST00000589753 TRAV7A0A075B6U4 112 aa7.72□□□□□ -1.17
ATG4D-211ENST00000589753 KRTAP19-2Q3LHN2 52 aa7.72□□□□□ -1.17
ATG4D-211ENST00000589753 MPLKIPQ8TAP9 179 aa7.72□□□□□ -1.17
ATG4D-211ENST00000589753 COX6B2Q6YFQ2 88 aa7.71□□□□□ -1.18
ATG4D-211ENST00000589753 C1orf64Q8NEQ6 169 aa7.71□□□□□ -1.18
ATG4D-211ENST00000589753 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.18
ATG4D-211ENST00000589753 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.18
ATG4D-211ENST00000589753 CYP4F30PQ9H0H9 118 aa7.71□□□□□ -1.18
ATG4D-211ENST00000589753 LINC00208Q96KT6 92 aa7.7□□□□□ -1.18
ATG4D-211ENST00000589753 H3BPC8 53 aa7.68□□□□□ -1.18
ATG4D-211ENST00000589753 FAM236DA0A1B0GTK5 79 aa7.67□□□□□ -1.18
ATG4D-211ENST00000589753 FAM236CP0DP71 79 aa7.67□□□□□ -1.18
ATG4D-211ENST00000589753 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
ATG4D-211ENST00000589753 SERP2Q8N6R1 65 aa7.64□□□□□ -1.19
ATG4D-211ENST00000589753 C4orf26Q17RF5 130 aa7.63□□□□□ -1.19
ATG4D-211ENST00000589753 FAT4Q6V0I7 4981 aa7.58□□□□□ -1.2
ATG4D-211ENST00000589753 KLKP1Q107X0 134 aa7.58□□□□□ -1.2
ATG4D-211ENST00000589753 MT1HP80294 61 aa7.56□□□□□ -1.2
ATG4D-211ENST00000589753 COX7CP15954 63 aa7.54□□□□□ -1.2
ATG4D-211ENST00000589753 C20orf197Q8N268 126 aa7.54□□□□□ -1.2
ATG4D-211ENST00000589753 KRTAP9-2Q9BYQ4 174 aa7.54□□□□□ -1.2
ATG4D-211ENST00000589753 H1FX-AS1Q4G0G2 97 aa7.53□□□□□ -1.2
ATG4D-211ENST00000589753 LCE2AQ5TA79 106 aaPredicted RBP7.53□□□□□ -1.2
ATG4D-211ENST00000589753 ANAPC13Q9BS18 74 aa7.53□□□□□ -1.2
ATG4D-211ENST00000589753 SNURFQ9Y675 71 aa7.53□□□□□ -1.2
ATG4D-211ENST00000589753 KRTAP3-1Q9BYR8 98 aa7.51□□□□□ -1.21
ATG4D-211ENST00000589753 M0R2T5 61 aa7.47□□□□□ -1.21
ATG4D-211ENST00000589753 A8MUN3 132 aa7.43□□□□□ -1.22
ATG4D-211ENST00000589753 FLGP20930 4061 aaPredicted RBP7.4□□□□□ -1.22
ATG4D-211ENST00000589753 KRTAP9-6A0A140TA67 174 aa7.4□□□□□ -1.22
ATG4D-211ENST00000589753 S4R3F8 94 aa7.39□□□□□ -1.23
ATG4D-211ENST00000589753 DMAC1Q96GE9 116 aa7.38□□□□□ -1.23
ATG4D-211ENST00000589753 CCDC179H3BU77 68 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms