RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 XP32Q5T750 250 aa8.52□□□□□ -1.05
RPRD1A-208ENST00000589050 J3KT08 172 aa8.49□□□□□ -1.05
RPRD1A-208ENST00000589050 LRP2P98164 4655 aa8.48□□□□□ -1.05
RPRD1A-208ENST00000589050 LINC00846Q9NV44 126 aa8.46□□□□□ -1.06
RPRD1A-208ENST00000589050 Q6ZVQ6 151 aa8.45□□□□□ -1.06
RPRD1A-208ENST00000589050 UBL5Q9BZL1 73 aa8.44□□□□□ -1.06
RPRD1A-208ENST00000589050 IGHV6-1A0A0B4J1U7 121 aa8.43□□□□□ -1.06
RPRD1A-208ENST00000589050 DSCR10P59022 87 aa8.43□□□□□ -1.06
RPRD1A-208ENST00000589050 A0A1B0GVX0 72 aa8.42□□□□□ -1.06
RPRD1A-208ENST00000589050 NDUFB1O75438 58 aa8.42□□□□□ -1.06
RPRD1A-208ENST00000589050 A8MWP4 228 aa8.41□□□□□ -1.06
RPRD1A-208ENST00000589050 BPY2O14599 106 aa8.4□□□□□ -1.06
RPRD1A-208ENST00000589050 LINC00313P59037 77 aa8.4□□□□□ -1.06
RPRD1A-208ENST00000589050 IGKV3D-7A0A0C4DH55 119 aa8.38□□□□□ -1.07
RPRD1A-208ENST00000589050 ACYP1P07311 99 aa8.38□□□□□ -1.07
RPRD1A-208ENST00000589050 FAM240AA0A1B0GVK7 77 aa8.37□□□□□ -1.07
RPRD1A-208ENST00000589050 C8orf87E5RJ46 101 aa8.37□□□□□ -1.07
RPRD1A-208ENST00000589050 NOTCH2NLQ7Z3S9 236 aa8.37□□□□□ -1.07
RPRD1A-208ENST00000589050 UBR4Q5T4S7 5183 aa8.36□□□□□ -1.07
RPRD1A-208ENST00000589050 SEC61BP60468 96 aaKnown RBP8.35□□□□□ -1.07
RPRD1A-208ENST00000589050 PRR15Q8IV56 129 aa8.35□□□□□ -1.07
RPRD1A-208ENST00000589050 RPL37P61927 97 aaKnown RBP8.34□□□□□ -1.07
RPRD1A-208ENST00000589050 K7EQZ3 153 aa8.33□□□□□ -1.08
RPRD1A-208ENST00000589050 KRTAP16-1A8MUX0 517 aa8.32□□□□□ -1.08
RPRD1A-208ENST00000589050 C8orf17Q9NRJ1 99 aa8.32□□□□□ -1.08
RPRD1A-208ENST00000589050 Q75L30 129 aa8.31□□□□□ -1.08
RPRD1A-208ENST00000589050 C20orf166-AS1Q96NR2 134 aa8.31□□□□□ -1.08
RPRD1A-208ENST00000589050 J3QR89 54 aa8.3□□□□□ -1.08
RPRD1A-208ENST00000589050 Q8N9L7 120 aa8.3□□□□□ -1.08
RPRD1A-208ENST00000589050 A8MUU9 505 aa8.29□□□□□ -1.08
RPRD1A-208ENST00000589050 PCOTHQ58A44 107 aa8.29□□□□□ -1.08
RPRD1A-208ENST00000589050 MMP24-AS1A0A0U1RRL7 71 aa8.27□□□□□ -1.09
RPRD1A-208ENST00000589050 CXCL6P80162 114 aa8.27□□□□□ -1.09
RPRD1A-208ENST00000589050 MUC17Q685J3 4493 aa8.27□□□□□ -1.09
RPRD1A-208ENST00000589050 ATP11AUNQ6ZP68 121 aa8.25□□□□□ -1.09
RPRD1A-208ENST00000589050 hDV103S1A0JD37 113 aa8.23□□□□□ -1.09
RPRD1A-208ENST00000589050 ATP5EP2Q5VTU8 51 aa8.22□□□□□ -1.09
RPRD1A-208ENST00000589050 TMEM254Q8TBM7 123 aa8.22□□□□□ -1.09
RPRD1A-208ENST00000589050 RNF213Q63HN8 5207 aa8.22□□□□□ -1.09
RPRD1A-208ENST00000589050 WFDC13Q8IUB5 93 aa8.21□□□□□ -1.1
RPRD1A-208ENST00000589050 KRTAP4-8Q9BYQ9 185 aa8.21□□□□□ -1.1
RPRD1A-208ENST00000589050 CASC2Q6XLA1 102 aa8.2□□□□□ -1.1
RPRD1A-208ENST00000589050 LINC00643Q86TS7 51 aa8.2□□□□□ -1.1
RPRD1A-208ENST00000589050 Q8N9P0 234 aaPredicted RBP8.2□□□□□ -1.1
RPRD1A-208ENST00000589050 MRPL34Q9BQ48 92 aaKnown RBP8.2□□□□□ -1.1
RPRD1A-208ENST00000589050 KRTAP4-1Q9BYQ7 146 aa8.19□□□□□ -1.1
RPRD1A-208ENST00000589050 HCG22E2RYF7 251 aa8.18□□□□□ -1.1
RPRD1A-208ENST00000589050 K7ERU9 68 aa8.17□□□□□ -1.1
RPRD1A-208ENST00000589050 NDUFS5O43920 106 aa8.15□□□□□ -1.1
RPRD1A-208ENST00000589050 HIST1H4AP62805 103 aaKnown RBP8.13□□□□□ -1.11
RPRD1A-208ENST00000589050 ZCCHC13Q8WW36 166 aaKnown RBP8.13□□□□□ -1.11
RPRD1A-208ENST00000589050 MUC2Q02817 5179 aa8.07□□□□□ -1.12
RPRD1A-208ENST00000589050 KRTAP9-2Q9BYQ4 174 aa8.06□□□□□ -1.12
RPRD1A-208ENST00000589050 A0A087WVE0 104 aa8.05□□□□□ -1.12
RPRD1A-208ENST00000589050 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.04□□□□□ -1.12
RPRD1A-208ENST00000589050 A0A0U1RQV1 116 aa8.03□□□□□ -1.12
RPRD1A-208ENST00000589050 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
RPRD1A-208ENST00000589050 Q5W150 140 aa8□□□□□ -1.13
RPRD1A-208ENST00000589050 MT-ATP8P03928 68 aa7.99□□□□□ -1.13
RPRD1A-208ENST00000589050 TP53AIP1Q9HCN2 124 aa7.99□□□□□ -1.13
RPRD1A-208ENST00000589050 SPINK7P58062 85 aa7.97□□□□□ -1.13
RPRD1A-208ENST00000589050 IMUPQ9GZP8 106 aa7.94□□□□□ -1.14
RPRD1A-208ENST00000589050 HRES1P13985 223 aa7.92□□□□□ -1.14
RPRD1A-208ENST00000589050 KRTAP19-2Q3LHN2 52 aa7.92□□□□□ -1.14
RPRD1A-208ENST00000589050 IGKV2D-30A0A075B6S6 120 aa7.91□□□□□ -1.14
RPRD1A-208ENST00000589050 IGKV2-30P06310 120 aa7.91□□□□□ -1.14
RPRD1A-208ENST00000589050 KRTAP4-12Q9BQ66 201 aa7.91□□□□□ -1.14
RPRD1A-208ENST00000589050 COX6B2Q6YFQ2 88 aa7.9□□□□□ -1.14
RPRD1A-208ENST00000589050 UQCRQO14949 82 aa7.89□□□□□ -1.15
RPRD1A-208ENST00000589050 C7orf65Q6ZTY9 151 aa7.89□□□□□ -1.15
RPRD1A-208ENST00000589050 TRAV22A0A0B4J277 110 aa7.87□□□□□ -1.15
RPRD1A-208ENST00000589050 FAT4Q6V0I7 4981 aa7.86□□□□□ -1.15
RPRD1A-208ENST00000589050 SCGB1A1P11684 91 aa7.86□□□□□ -1.15
RPRD1A-208ENST00000589050 RBM12B-AS1Q9P1G2 102 aa7.86□□□□□ -1.15
RPRD1A-208ENST00000589050 MPLKIPQ8TAP9 179 aa7.85□□□□□ -1.15
RPRD1A-208ENST00000589050 OCR1Q9BZK8 76 aa7.84□□□□□ -1.15
RPRD1A-208ENST00000589050 FAM236DA0A1B0GTK5 79 aa7.83□□□□□ -1.16
RPRD1A-208ENST00000589050 FAM236CP0DP71 79 aa7.83□□□□□ -1.16
RPRD1A-208ENST00000589050 FAM236AA0A1B0GUQ0 79 aa7.82□□□□□ -1.16
RPRD1A-208ENST00000589050 FAM236BA0A1B0GV22 79 aa7.82□□□□□ -1.16
RPRD1A-208ENST00000589050 H0Y9P7 68 aa7.82□□□□□ -1.16
RPRD1A-208ENST00000589050 LCE3BQ5TA77 95 aa7.82□□□□□ -1.16
RPRD1A-208ENST00000589050 KRTAP19-1Q8IUB9 90 aa7.8□□□□□ -1.16
RPRD1A-208ENST00000589050 ATOX1O00244 68 aa7.79□□□□□ -1.16
RPRD1A-208ENST00000589050 LOC101927531A0A1B0GV80 90 aa7.78□□□□□ -1.16
RPRD1A-208ENST00000589050 MT1HP80294 61 aa7.76□□□□□ -1.17
RPRD1A-208ENST00000589050 CYP4F30PQ9H0H9 118 aa7.76□□□□□ -1.17
RPRD1A-208ENST00000589050 MP68P56378 58 aa7.75□□□□□ -1.17
RPRD1A-208ENST00000589050 C5orf47Q569G3 176 aa7.75□□□□□ -1.17
RPRD1A-208ENST00000589050 C4orf26Q17RF5 130 aa7.73□□□□□ -1.17
RPRD1A-208ENST00000589050 SMIM20Q8N5G0 67 aa7.73□□□□□ -1.17
RPRD1A-208ENST00000589050 C1orf64Q8NEQ6 169 aa7.73□□□□□ -1.17
RPRD1A-208ENST00000589050 LINC00208Q96KT6 92 aa7.73□□□□□ -1.17
RPRD1A-208ENST00000589050 TRAV7A0A075B6U4 112 aa7.7□□□□□ -1.18
RPRD1A-208ENST00000589050 H3BPC8 53 aa7.68□□□□□ -1.18
RPRD1A-208ENST00000589050 M0R2T5 61 aa7.68□□□□□ -1.18
RPRD1A-208ENST00000589050 KRTAP9-9Q9BYP9 154 aa7.66□□□□□ -1.18
RPRD1A-208ENST00000589050 KRTAP9-4Q9BYQ2 154 aa7.66□□□□□ -1.18
RPRD1A-208ENST00000589050 H1FX-AS1Q4G0G2 97 aa7.64□□□□□ -1.19
RPRD1A-208ENST00000589050 FLGP20930 4061 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms