RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ATP5EP2Q5VTU8 51 aa9.39□□□□□ -0.91
SCAMP4-211ENST00000588907 C8orf87E5RJ46 101 aa9.38□□□□□ -0.91
SCAMP4-211ENST00000588907 CXCL6P80162 114 aa9.38□□□□□ -0.91
SCAMP4-211ENST00000588907 CDIP1Q9H305 208 aa9.37□□□□□ -0.91
SCAMP4-211ENST00000588907 IGHV6-1A0A0B4J1U7 121 aa9.35□□□□□ -0.91
SCAMP4-211ENST00000588907 PRR15Q8IV56 129 aa9.35□□□□□ -0.91
SCAMP4-211ENST00000588907 DSCR10P59022 87 aa9.34□□□□□ -0.91
SCAMP4-211ENST00000588907 LINC00313P59037 77 aa9.34□□□□□ -0.91
SCAMP4-211ENST00000588907 LINC00643Q86TS7 51 aa9.34□□□□□ -0.91
SCAMP4-211ENST00000588907 IGKV3D-7A0A0C4DH55 119 aa9.33□□□□□ -0.92
SCAMP4-211ENST00000588907 C9orf92A6NGG3 77 aa9.32□□□□□ -0.92
SCAMP4-211ENST00000588907 LPAP08519 4548 aa9.31□□□□□ -0.92
SCAMP4-211ENST00000588907 K7EQZ3 153 aa9.3□□□□□ -0.92
SCAMP4-211ENST00000588907 XP32Q5T750 250 aa9.27□□□□□ -0.93
SCAMP4-211ENST00000588907 C8orf17Q9NRJ1 99 aa9.27□□□□□ -0.93
SCAMP4-211ENST00000588907 LRP2P98164 4655 aa9.26□□□□□ -0.93
SCAMP4-211ENST00000588907 Q8N9L7 120 aa9.23□□□□□ -0.93
SCAMP4-211ENST00000588907 Q75L30 129 aa9.22□□□□□ -0.93
SCAMP4-211ENST00000588907 MMP24-AS1A0A0U1RRL7 71 aa9.21□□□□□ -0.94
SCAMP4-211ENST00000588907 NOTCH2NLQ7Z3S9 236 aa9.21□□□□□ -0.94
SCAMP4-211ENST00000588907 TMEM254Q8TBM7 123 aa9.21□□□□□ -0.94
SCAMP4-211ENST00000588907 C20orf166-AS1Q96NR2 134 aa9.21□□□□□ -0.94
SCAMP4-211ENST00000588907 hDV103S1A0JD37 113 aa9.2□□□□□ -0.94
SCAMP4-211ENST00000588907 KRTAP16-1A8MUX0 517 aa9.2□□□□□ -0.94
SCAMP4-211ENST00000588907 HCG22E2RYF7 251 aa9.19□□□□□ -0.94
SCAMP4-211ENST00000588907 RPL37P61927 97 aaKnown RBP9.19□□□□□ -0.94
SCAMP4-211ENST00000588907 A8MUU9 505 aa9.18□□□□□ -0.94
SCAMP4-211ENST00000588907 SEC61BP60468 96 aaKnown RBP9.18□□□□□ -0.94
SCAMP4-211ENST00000588907 CASC2Q6XLA1 102 aa9.18□□□□□ -0.94
SCAMP4-211ENST00000588907 HIST1H4AP62805 103 aaKnown RBP9.17□□□□□ -0.94
SCAMP4-211ENST00000588907 MRPL34Q9BQ48 92 aaKnown RBP9.17□□□□□ -0.94
SCAMP4-211ENST00000588907 Q8N9P0 234 aaPredicted RBP9.15□□□□□ -0.94
SCAMP4-211ENST00000588907 ATP11AUNQ6ZP68 121 aa9.13□□□□□ -0.95
SCAMP4-211ENST00000588907 WFDC13Q8IUB5 93 aa9.13□□□□□ -0.95
SCAMP4-211ENST00000588907 MUC17Q685J3 4493 aa9.13□□□□□ -0.95
SCAMP4-211ENST00000588907 IMUPQ9GZP8 106 aa9.12□□□□□ -0.95
SCAMP4-211ENST00000588907 NDUFS5O43920 106 aa9.07□□□□□ -0.96
SCAMP4-211ENST00000588907 UBR4Q5T4S7 5183 aa9.05□□□□□ -0.96
SCAMP4-211ENST00000588907 MT-ATP8P03928 68 aa9.05□□□□□ -0.96
SCAMP4-211ENST00000588907 PCOTHQ58A44 107 aa9.04□□□□□ -0.96
SCAMP4-211ENST00000588907 TP53AIP1Q9HCN2 124 aa9.04□□□□□ -0.96
SCAMP4-211ENST00000588907 A0A087WVE0 104 aa9.03□□□□□ -0.96
SCAMP4-211ENST00000588907 ZCCHC13Q8WW36 166 aaKnown RBP9.02□□□□□ -0.97
SCAMP4-211ENST00000588907 SCGB1A1P11684 91 aa8.94□□□□□ -0.98
SCAMP4-211ENST00000588907 RNF213Q63HN8 5207 aa8.91□□□□□ -0.98
SCAMP4-211ENST00000588907 UQCRQO14949 82 aa8.91□□□□□ -0.98
SCAMP4-211ENST00000588907 FAM236AA0A1B0GUQ0 79 aa8.89□□□□□ -0.99
SCAMP4-211ENST00000588907 FAM236BA0A1B0GV22 79 aa8.89□□□□□ -0.99
SCAMP4-211ENST00000588907 SMIM20Q8N5G0 67 aa8.88□□□□□ -0.99
SCAMP4-211ENST00000588907 TRAV22A0A0B4J277 110 aa8.87□□□□□ -0.99
SCAMP4-211ENST00000588907 OCR1Q9BZK8 76 aa8.86□□□□□ -0.99
SCAMP4-211ENST00000588907 ATOX1O00244 68 aa8.85□□□□□ -0.99
SCAMP4-211ENST00000588907 Q5W150 140 aa8.85□□□□□ -0.99
SCAMP4-211ENST00000588907 MUC2Q02817 5179 aa8.84□□□□□ -0.99
SCAMP4-211ENST00000588907 SPINK7P58062 85 aa8.82□□□□□ -1
SCAMP4-211ENST00000588907 C7orf65Q6ZTY9 151 aa8.82□□□□□ -1
SCAMP4-211ENST00000588907 KRTAP4-1Q9BYQ7 146 aa8.81□□□□□ -1
SCAMP4-211ENST00000588907 C5orf47Q569G3 176 aa8.8□□□□□ -1
SCAMP4-211ENST00000588907 A0A0U1RQV1 116 aa8.79□□□□□ -1
SCAMP4-211ENST00000588907 MP68P56378 58 aa8.79□□□□□ -1
SCAMP4-211ENST00000588907 H0Y9P7 68 aa8.78□□□□□ -1
SCAMP4-211ENST00000588907 IGKV2D-30A0A075B6S6 120 aa8.77□□□□□ -1.01
SCAMP4-211ENST00000588907 TRAV7A0A075B6U4 112 aa8.77□□□□□ -1.01
SCAMP4-211ENST00000588907 LOC101927531A0A1B0GV80 90 aa8.77□□□□□ -1.01
SCAMP4-211ENST00000588907 IGKV2-30P06310 120 aa8.77□□□□□ -1.01
SCAMP4-211ENST00000588907 H3BPC8 53 aa8.75□□□□□ -1.01
SCAMP4-211ENST00000588907 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
SCAMP4-211ENST00000588907 HRES1P13985 223 aa8.7□□□□□ -1.02
SCAMP4-211ENST00000588907 C1orf64Q8NEQ6 169 aa8.7□□□□□ -1.02
SCAMP4-211ENST00000588907 SERP2Q8N6R1 65 aa8.68□□□□□ -1.02
SCAMP4-211ENST00000588907 LINC00208Q96KT6 92 aa8.68□□□□□ -1.02
SCAMP4-211ENST00000588907 CYP4F30PQ9H0H9 118 aa8.68□□□□□ -1.02
SCAMP4-211ENST00000588907 MPLKIPQ8TAP9 179 aa8.66□□□□□ -1.02
SCAMP4-211ENST00000588907 COX6B2Q6YFQ2 88 aa8.64□□□□□ -1.03
SCAMP4-211ENST00000588907 FAM236DA0A1B0GTK5 79 aa8.62□□□□□ -1.03
SCAMP4-211ENST00000588907 FAM236CP0DP71 79 aa8.62□□□□□ -1.03
SCAMP4-211ENST00000588907 FAT4Q6V0I7 4981 aa8.58□□□□□ -1.04
SCAMP4-211ENST00000588907 KRTAP19-2Q3LHN2 52 aa8.57□□□□□ -1.04
SCAMP4-211ENST00000588907 COX7CP15954 63 aa8.56□□□□□ -1.04
SCAMP4-211ENST00000588907 ANAPC13Q9BS18 74 aa8.56□□□□□ -1.04
SCAMP4-211ENST00000588907 C4orf26Q17RF5 130 aa8.54□□□□□ -1.04
SCAMP4-211ENST00000588907 C20orf197Q8N268 126 aa8.52□□□□□ -1.05
SCAMP4-211ENST00000588907 FLGP20930 4061 aaPredicted RBP8.51□□□□□ -1.05
SCAMP4-211ENST00000588907 LCE2CQ5TA81 110 aa8.51□□□□□ -1.05
SCAMP4-211ENST00000588907 KLKP1Q107X0 134 aa8.5□□□□□ -1.05
SCAMP4-211ENST00000588907 SNURFQ9Y675 71 aa8.47□□□□□ -1.05
SCAMP4-211ENST00000588907 A8MUN3 132 aa8.46□□□□□ -1.06
SCAMP4-211ENST00000588907 H1FX-AS1Q4G0G2 97 aa8.46□□□□□ -1.06
SCAMP4-211ENST00000588907 NDUFC1O43677 76 aa8.43□□□□□ -1.06
SCAMP4-211ENST00000588907 MT1HP80294 61 aa8.4□□□□□ -1.06
SCAMP4-211ENST00000588907 KRTAP3-1Q9BYR8 98 aa8.38□□□□□ -1.07
SCAMP4-211ENST00000588907 SPANXA2-OT1Q8N9U9 137 aa8.37□□□□□ -1.07
SCAMP4-211ENST00000588907 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
SCAMP4-211ENST00000588907 M0R2T5 61 aa8.35□□□□□ -1.07
SCAMP4-211ENST00000588907 DMAC1Q96GE9 116 aa8.35□□□□□ -1.07
SCAMP4-211ENST00000588907 CCDC179H3BU77 68 aa8.34□□□□□ -1.07
SCAMP4-211ENST00000588907 S4R3F8 94 aa8.32□□□□□ -1.08
SCAMP4-211ENST00000588907 H7BZZ5 65 aa8.28□□□□□ -1.08
SCAMP4-211ENST00000588907 ACYP2P14621 99 aa8.27□□□□□ -1.09
SCAMP4-211ENST00000588907 PCP4P48539 62 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms