RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 IGKV4-1P06312 121 aa7.24□□□□□ -1.25
SRSF1-204ENST00000581979 LINC00304Q8N9R0 145 aa7.24□□□□□ -1.25
SRSF1-204ENST00000581979 Q96NJ1 140 aa7.24□□□□□ -1.25
SRSF1-204ENST00000581979 K7EQZ3 153 aa7.24□□□□□ -1.25
SRSF1-204ENST00000581979 LIMD2Q9BT23 127 aa7.24□□□□□ -1.25
SRSF1-204ENST00000581979 SPINK1P00995 79 aa7.22□□□□□ -1.25
SRSF1-204ENST00000581979 SPAG11AQ6PDA7 123 aa7.22□□□□□ -1.25
SRSF1-204ENST00000581979 ASB16-AS1Q495Z4 193 aa7.21□□□□□ -1.25
SRSF1-204ENST00000581979 A8MWP4 228 aa7.21□□□□□ -1.26
SRSF1-204ENST00000581979 Q5XG85 94 aa7.21□□□□□ -1.26
SRSF1-204ENST00000581979 LCE2BO14633 110 aa7.2□□□□□ -1.26
SRSF1-204ENST00000581979 NDUFB1O75438 58 aa7.19□□□□□ -1.26
SRSF1-204ENST00000581979 RNF213Q63HN8 5207 aa7.18□□□□□ -1.26
SRSF1-204ENST00000581979 PRR15Q8IV56 129 aa7.18□□□□□ -1.26
SRSF1-204ENST00000581979 RPS29P62273 56 aaKnown RBP7.17□□□□□ -1.26
SRSF1-204ENST00000581979 ATOX1O00244 68 aa7.16□□□□□ -1.26
SRSF1-204ENST00000581979 C1orf195Q5TG92 126 aa7.15□□□□□ -1.26
SRSF1-204ENST00000581979 HCG22E2RYF7 251 aa7.15□□□□□ -1.27
SRSF1-204ENST00000581979 PCP4P48539 62 aa7.15□□□□□ -1.27
SRSF1-204ENST00000581979 ANAPC13Q9BS18 74 aa7.15□□□□□ -1.27
SRSF1-204ENST00000581979 A0A1B0GVX0 72 aa7.14□□□□□ -1.27
SRSF1-204ENST00000581979 IGHV6-1A0A0B4J1U7 121 aa7.13□□□□□ -1.27
SRSF1-204ENST00000581979 WFDC13Q8IUB5 93 aa7.13□□□□□ -1.27
SRSF1-204ENST00000581979 LPAP08519 4548 aa7.12□□□□□ -1.27
SRSF1-204ENST00000581979 MMP24-AS1A0A0U1RRL7 71 aa7.1□□□□□ -1.27
SRSF1-204ENST00000581979 CASC2Q6XLA1 102 aa7.1□□□□□ -1.27
SRSF1-204ENST00000581979 C8orf17Q9NRJ1 99 aa7.1□□□□□ -1.27
SRSF1-204ENST00000581979 hDV103S1A0JD37 113 aa7.07□□□□□ -1.28
SRSF1-204ENST00000581979 SMIM20Q8N5G0 67 aa7.07□□□□□ -1.28
SRSF1-204ENST00000581979 C8orf87E5RJ46 101 aa7.06□□□□□ -1.28
SRSF1-204ENST00000581979 PRR4Q16378 134 aa7.05□□□□□ -1.28
SRSF1-204ENST00000581979 SERP2Q8N6R1 65 aa7.05□□□□□ -1.28
SRSF1-204ENST00000581979 NOTCH2NLQ7Z3S9 236 aa7.04□□□□□ -1.28
SRSF1-204ENST00000581979 TRAV7A0A075B6U4 112 aa7.04□□□□□ -1.28
SRSF1-204ENST00000581979 LINC00313P59037 77 aa7.04□□□□□ -1.28
SRSF1-204ENST00000581979 RETNLBQ9BQ08 111 aa7.04□□□□□ -1.28
SRSF1-204ENST00000581979 COX7CP15954 63 aa7.02□□□□□ -1.29
SRSF1-204ENST00000581979 TMEM254Q8TBM7 123 aa7.02□□□□□ -1.29
SRSF1-204ENST00000581979 MRPL34Q9BQ48 92 aaKnown RBP7.01□□□□□ -1.29
SRSF1-204ENST00000581979 OCR1Q9BZK8 76 aa7.01□□□□□ -1.29
SRSF1-204ENST00000581979 UQCRQO14949 82 aa6.99□□□□□ -1.29
SRSF1-204ENST00000581979 NDUFS5O43920 106 aa6.99□□□□□ -1.29
SRSF1-204ENST00000581979 CCDC179H3BU77 68 aa6.98□□□□□ -1.29
SRSF1-204ENST00000581979 MUC2Q02817 5179 aa6.95□□□□□ -1.3
SRSF1-204ENST00000581979 KRTAP16-1A8MUX0 517 aa6.94□□□□□ -1.3
SRSF1-204ENST00000581979 TP53AIP1Q9HCN2 124 aa6.94□□□□□ -1.3
SRSF1-204ENST00000581979 FP248Q71RG6 208 aaPredicted RBP6.93□□□□□ -1.3
SRSF1-204ENST00000581979 C9orf92A6NGG3 77 aa6.93□□□□□ -1.3
SRSF1-204ENST00000581979 C20orf197Q8N268 126 aa6.93□□□□□ -1.3
SRSF1-204ENST00000581979 C5orf47Q569G3 176 aa6.92□□□□□ -1.3
SRSF1-204ENST00000581979 Q8N9P0 234 aaPredicted RBP6.91□□□□□ -1.3
SRSF1-204ENST00000581979 TPRXLQ17RH7 258 aa6.9□□□□□ -1.31
SRSF1-204ENST00000581979 H0Y9P7 68 aa6.89□□□□□ -1.31
SRSF1-204ENST00000581979 MP68P56378 58 aa6.89□□□□□ -1.31
SRSF1-204ENST00000581979 IGLV7-46A0A075B6I9 117 aa6.88□□□□□ -1.31
SRSF1-204ENST00000581979 TRAV22A0A0B4J277 110 aa6.88□□□□□ -1.31
SRSF1-204ENST00000581979 SNURFQ9Y675 71 aa6.88□□□□□ -1.31
SRSF1-204ENST00000581979 A0A0U1RQV1 116 aa6.87□□□□□ -1.31
SRSF1-204ENST00000581979 KLKP1Q107X0 134 aa6.85□□□□□ -1.31
SRSF1-204ENST00000581979 LCE2AQ5TA79 106 aaPredicted RBP6.85□□□□□ -1.31
SRSF1-204ENST00000581979 LINC00208Q96KT6 92 aa6.84□□□□□ -1.31
SRSF1-204ENST00000581979 H3BPC8 53 aa6.84□□□□□ -1.31
SRSF1-204ENST00000581979 CYSTM1Q9H1C7 97 aa6.84□□□□□ -1.31
SRSF1-204ENST00000581979 Q5W150 140 aa6.82□□□□□ -1.32
SRSF1-204ENST00000581979 C20orf166-AS1Q96NR2 134 aa6.82□□□□□ -1.32
SRSF1-204ENST00000581979 C1orf64Q8NEQ6 169 aa6.81□□□□□ -1.32
SRSF1-204ENST00000581979 A8MUU9 505 aa6.81□□□□□ -1.32
SRSF1-204ENST00000581979 KRTAP13-3Q3SY46 172 aa6.8□□□□□ -1.32
SRSF1-204ENST00000581979 ZCCHC13Q8WW36 166 aaKnown RBP6.8□□□□□ -1.32
SRSF1-204ENST00000581979 NDUFC1O43677 76 aa6.79□□□□□ -1.32
SRSF1-204ENST00000581979 MUC17Q685J3 4493 aa6.78□□□□□ -1.32
SRSF1-204ENST00000581979 Q75L30 129 aa6.77□□□□□ -1.33
SRSF1-204ENST00000581979 LOC101927531A0A1B0GV80 90 aa6.76□□□□□ -1.33
SRSF1-204ENST00000581979 H7BZZ5 65 aa6.76□□□□□ -1.33
SRSF1-204ENST00000581979 XP32Q5T750 250 aa6.76□□□□□ -1.33
SRSF1-204ENST00000581979 FAT4Q6V0I7 4981 aa6.75□□□□□ -1.33
SRSF1-204ENST00000581979 TMEM258P61165 79 aa6.73□□□□□ -1.33
SRSF1-204ENST00000581979 RPL37P61927 97 aaKnown RBP6.72□□□□□ -1.33
SRSF1-204ENST00000581979 IGKV2-30P06310 120 aa6.71□□□□□ -1.34
SRSF1-204ENST00000581979 PCOTHQ58A44 107 aa6.71□□□□□ -1.34
SRSF1-204ENST00000581979 IGKV2D-30A0A075B6S6 120 aa6.7□□□□□ -1.34
SRSF1-204ENST00000581979 ATP11AUNQ6ZP68 121 aa6.7□□□□□ -1.34
SRSF1-204ENST00000581979 CYP4F30PQ9H0H9 118 aa6.7□□□□□ -1.34
SRSF1-204ENST00000581979 FAM236DA0A1B0GTK5 79 aa6.67□□□□□ -1.34
SRSF1-204ENST00000581979 FAM236CP0DP71 79 aa6.67□□□□□ -1.34
SRSF1-204ENST00000581979 LCE2CQ5TA81 110 aa6.67□□□□□ -1.34
SRSF1-204ENST00000581979 SEC61BP60468 96 aaKnown RBP6.66□□□□□ -1.34
SRSF1-204ENST00000581979 C7orf65Q6ZTY9 151 aa6.66□□□□□ -1.34
SRSF1-204ENST00000581979 ATP5EP56381 51 aaPredicted RBP6.64□□□□□ -1.35
SRSF1-204ENST00000581979 KRTAP9-2Q9BYQ4 174 aa6.63□□□□□ -1.35
SRSF1-204ENST00000581979 KRTAP4-1Q9BYQ7 146 aa6.63□□□□□ -1.35
SRSF1-204ENST00000581979 SPANXA2-OT1Q8N9U9 137 aa6.62□□□□□ -1.35
SRSF1-204ENST00000581979 HRES1P13985 223 aa6.61□□□□□ -1.35
SRSF1-204ENST00000581979 SPINK7P58062 85 aa6.6□□□□□ -1.35
SRSF1-204ENST00000581979 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
SRSF1-204ENST00000581979 SERP1Q9Y6X1 66 aa6.52□□□□□ -1.37
SRSF1-204ENST00000581979 C4orf26Q17RF5 130 aa6.51□□□□□ -1.37
SRSF1-204ENST00000581979 DMAC1Q96GE9 116 aa6.49□□□□□ -1.37
SRSF1-204ENST00000581979 KRTAP19-2Q3LHN2 52 aa6.48□□□□□ -1.37
SRSF1-204ENST00000581979 ACYP2P14621 99 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms