RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 SRRM2Q9UQ35 2752 aaKnown RBP2.73□□□□□ -1.97
NUP85-213ENST00000579838 RYR3Q15413 4870 aa2.73□□□□□ -1.97
NUP85-213ENST00000579838 KRTAP29-1A8MX34 341 aaPredicted RBP2.73□□□□□ -1.97
NUP85-213ENST00000579838 KRTAP13-2Q52LG2 175 aa2.73□□□□□ -1.97
NUP85-213ENST00000579838 WFDC13Q8IUB5 93 aa2.73□□□□□ -1.97
NUP85-213ENST00000579838 PRO0628Q9UI54 55 aa2.73□□□□□ -1.97
NUP85-213ENST00000579838 RYR2Q92736 4967 aa2.73□□□□□ -1.97
NUP85-213ENST00000579838 A0A087X002 238 aa2.72□□□□□ -1.97
NUP85-213ENST00000579838 A0A0U1RQV1 116 aa2.72□□□□□ -1.97
NUP85-213ENST00000579838 MMP24-AS1A0A0U1RRL7 71 aa2.72□□□□□ -1.97
NUP85-213ENST00000579838 LCE6AA0A183 80 aa2.72□□□□□ -1.97
NUP85-213ENST00000579838 A0A1B0GVY2 172 aa2.72□□□□□ -1.97
NUP85-213ENST00000579838 HCG22E2RYF7 251 aa2.72□□□□□ -1.97
NUP85-213ENST00000579838 H7BZZ5 65 aa2.72□□□□□ -1.97
NUP85-213ENST00000579838 ZNF706Q9Y5V0 76 aaPredicted RBP2.72□□□□□ -1.97
NUP85-213ENST00000579838 KMT2CQ8NEZ4 4911 aaKnown RBP2.72□□□□□ -1.97
NUP85-213ENST00000579838 APOBP04114 4563 aaKnown RBP2.72□□□□□ -1.97
NUP85-213ENST00000579838 PKHD1L1Q86WI1 4243 aa2.72□□□□□ -1.97
NUP85-213ENST00000579838 A8MWP4 228 aa2.71□□□□□ -1.98
NUP85-213ENST00000579838 KRTAP1-4P0C5Y4 121 aa2.71□□□□□ -1.98
NUP85-213ENST00000579838 KLKP1Q107X0 134 aa2.71□□□□□ -1.98
NUP85-213ENST00000579838 PRR15Q8IV56 129 aa2.71□□□□□ -1.98
NUP85-213ENST00000579838 RYR1P21817 5038 aa2.71□□□□□ -1.98
NUP85-213ENST00000579838 TMEM258P61165 79 aa2.7□□□□□ -1.98
NUP85-213ENST00000579838 C4orf26Q17RF5 130 aa2.7□□□□□ -1.98
NUP85-213ENST00000579838 NOTCH2NLQ7Z3S9 236 aa2.7□□□□□ -1.98
NUP85-213ENST00000579838 TMEM254Q8TBM7 123 aa2.7□□□□□ -1.98
NUP85-213ENST00000579838 ZCCHC13Q8WW36 166 aaKnown RBP2.7□□□□□ -1.98
NUP85-213ENST00000579838 RPS28P62857 69 aaKnown RBP2.69□□□□□ -1.98
NUP85-213ENST00000579838 CD164Q04900 197 aa2.69□□□□□ -1.98
NUP85-213ENST00000579838 ASB16-AS1Q495Z4 193 aa2.69□□□□□ -1.98
NUP85-213ENST00000579838 CASC2Q6XLA1 102 aa2.69□□□□□ -1.98
NUP85-213ENST00000579838 PCLOQ9Y6V0 5065 aa2.68□□□□□ -1.98
NUP85-213ENST00000579838 FAM236DA0A1B0GTK5 79 aa2.68□□□□□ -1.98
NUP85-213ENST00000579838 FAM236CP0DP71 79 aa2.68□□□□□ -1.98
NUP85-213ENST00000579838 KRTAP10-4P60372 401 aaPredicted RBP2.68□□□□□ -1.98
NUP85-213ENST00000579838 C8orf17Q9NRJ1 99 aa2.68□□□□□ -1.98
NUP85-213ENST00000579838 A0A1B0GVX0 72 aa2.67□□□□□ -1.98
NUP85-213ENST00000579838 H3BS24 57 aa2.67□□□□□ -1.98
NUP85-213ENST00000579838 J3KT08 172 aa2.67□□□□□ -1.98
NUP85-213ENST00000579838 SMR3BP02814 79 aaPredicted RBP2.67□□□□□ -1.98
NUP85-213ENST00000579838 C1orf195Q5TG92 126 aa2.67□□□□□ -1.98
NUP85-213ENST00000579838 SPINK6Q6UWN8 80 aa2.67□□□□□ -1.98
NUP85-213ENST00000579838 IGHV6-1A0A0B4J1U7 121 aa2.66□□□□□ -1.98
NUP85-213ENST00000579838 EPPK1P58107 5090 aaKnown RBP2.66□□□□□ -1.98
NUP85-213ENST00000579838 hDV103S1A0JD37 113 aa2.65□□□□□ -1.99
NUP85-213ENST00000579838 H0Y9P7 68 aa2.65□□□□□ -1.99
NUP85-213ENST00000579838 FAM229BQ4G0N7 80 aa2.65□□□□□ -1.99
NUP85-213ENST00000579838 SSBP3-AS1Q7Z2R9 100 aa2.65□□□□□ -1.99
NUP85-213ENST00000579838 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
NUP85-213ENST00000579838 PRR26Q8N8Z3 221 aa2.64□□□□□ -1.99
NUP85-213ENST00000579838 LINC00208Q96KT6 92 aa2.64□□□□□ -1.99
NUP85-213ENST00000579838 PKHD1P08F94 4074 aa2.63□□□□□ -1.99
NUP85-213ENST00000579838 TRAV22A0A0B4J277 110 aa2.63□□□□□ -1.99
NUP85-213ENST00000579838 KRTAP16-1A8MUX0 517 aa2.63□□□□□ -1.99
NUP85-213ENST00000579838 NDUFC1O43677 76 aa2.63□□□□□ -1.99
NUP85-213ENST00000579838 NDUFB1O75438 58 aa2.63□□□□□ -1.99
NUP85-213ENST00000579838 PRR4Q16378 134 aa2.63□□□□□ -1.99
NUP85-213ENST00000579838 KRTAP13-3Q3SY46 172 aa2.63□□□□□ -1.99
NUP85-213ENST00000579838 Q5XG85 94 aa2.63□□□□□ -1.99
NUP85-213ENST00000579838 MRPL34Q9BQ48 92 aaKnown RBP2.63□□□□□ -1.99
NUP85-213ENST00000579838 SERP1Q9Y6X1 66 aa2.63□□□□□ -1.99
NUP85-213ENST00000579838 FAT1Q14517 4588 aa2.63□□□□□ -1.99
NUP85-213ENST00000579838 Q5W150 140 aa2.62□□□□□ -1.99
NUP85-213ENST00000579838 A0A0A0MQY5 61 aa2.61□□□□□ -1.99
NUP85-213ENST00000579838 CDK2AP2O75956 126 aa2.61□□□□□ -1.99
NUP85-213ENST00000579838 PLA2G1BP04054 148 aaKnown RBP2.61□□□□□ -1.99
NUP85-213ENST00000579838 FP248Q71RG6 208 aaPredicted RBP2.61□□□□□ -1.99
NUP85-213ENST00000579838 C1orf64Q8NEQ6 169 aa2.61□□□□□ -1.99
NUP85-213ENST00000579838 TYMSOSQ8TAI1 123 aa2.61□□□□□ -1.99
NUP85-213ENST00000579838 VPS13BQ7Z7G8 4022 aa2.61□□□□□ -1.99
NUP85-213ENST00000579838 NDUFS5O43920 106 aa2.6□□□□□ -1.99
NUP85-213ENST00000579838 MP68P56378 58 aa2.6□□□□□ -1.99
NUP85-213ENST00000579838 ATP5EP56381 51 aaPredicted RBP2.6□□□□□ -1.99
NUP85-213ENST00000579838 RETNLBQ9BQ08 111 aa2.6□□□□□ -1.99
NUP85-213ENST00000579838 FAT3Q8TDW7 4589 aa2.59□□□□□ -1.99
NUP85-213ENST00000579838 C8orf87E5RJ46 101 aa2.59□□□□□ -1.99
NUP85-213ENST00000579838 H3BPC8 53 aa2.59□□□□□ -1.99
NUP85-213ENST00000579838 PCOTHQ58A44 107 aa2.59□□□□□ -1.99
NUP85-213ENST00000579838 CYP4F30PQ9H0H9 118 aa2.59□□□□□ -1.99
NUP85-213ENST00000579838 HSPG2P98160 4391 aa2.58□□□□□ -2
NUP85-213ENST00000579838 PMAIP1Q13794 54 aa2.58□□□□□ -2
NUP85-213ENST00000579838 LINC00304Q8N9R0 145 aa2.58□□□□□ -2
NUP85-213ENST00000579838 LIMD2Q9BT23 127 aa2.58□□□□□ -2
NUP85-213ENST00000579838 TP53AIP1Q9HCN2 124 aa2.58□□□□□ -2
NUP85-213ENST00000579838 LINC00313P59037 77 aa2.57□□□□□ -2
NUP85-213ENST00000579838 Q8N9P0 234 aaPredicted RBP2.57□□□□□ -2
NUP85-213ENST00000579838 SMIM26A0A096LP01 95 aa2.56□□□□□ -2
NUP85-213ENST00000579838 SPINK1P00995 79 aa2.56□□□□□ -2
NUP85-213ENST00000579838 SPANXA2-OT1Q8N9U9 137 aa2.56□□□□□ -2
NUP85-213ENST00000579838 IGLV7-46A0A075B6I9 117 aa2.55□□□□□ -2
NUP85-213ENST00000579838 Q5VSD8 79 aa2.55□□□□□ -2
NUP85-213ENST00000579838 Q8N1X5 172 aa2.55□□□□□ -2
NUP85-213ENST00000579838 TNXBP22105 4242 aa2.54□□□□□ -2
NUP85-213ENST00000579838 C9orf92A6NGG3 77 aa2.54□□□□□ -2
NUP85-213ENST00000579838 IGKV2-30P06310 120 aa2.54□□□□□ -2
NUP85-213ENST00000579838 RPS29P62273 56 aaKnown RBP2.54□□□□□ -2
NUP85-213ENST00000579838 MPLKIPQ8TAP9 179 aa2.54□□□□□ -2
NUP85-213ENST00000579838 LRP1Q07954 4544 aaKnown RBP2.53□□□□□ -2
NUP85-213ENST00000579838 LOC101927531A0A1B0GV80 90 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms