RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 XP32Q5T750 250 aa9.1□□□□□ -0.95
TMEM88-202ENST00000574668 KRTAP4-1Q9BYQ7 146 aa9.09□□□□□ -0.95
TMEM88-202ENST00000574668 J3KT08 172 aa9.08□□□□□ -0.96
TMEM88-202ENST00000574668 FSIP2Q5CZC0 6907 aa9.06□□□□□ -0.96
TMEM88-202ENST00000574668 SEC61BP60468 96 aaKnown RBP9.03□□□□□ -0.96
TMEM88-202ENST00000574668 IGHV6-1A0A0B4J1U7 121 aa9.02□□□□□ -0.97
TMEM88-202ENST00000574668 NDUFB1O75438 58 aa9.02□□□□□ -0.97
TMEM88-202ENST00000574668 DSCR10P59022 87 aa9.02□□□□□ -0.97
TMEM88-202ENST00000574668 PCP4P48539 62 aa9.01□□□□□ -0.97
TMEM88-202ENST00000574668 LINC00313P59037 77 aa9.01□□□□□ -0.97
TMEM88-202ENST00000574668 A0A1B0GVX0 72 aa9□□□□□ -0.97
TMEM88-202ENST00000574668 LCE2DQ5TA82 110 aaPredicted RBP9□□□□□ -0.97
TMEM88-202ENST00000574668 K7ERU9 68 aa8.99□□□□□ -0.97
TMEM88-202ENST00000574668 C8orf87E5RJ46 101 aa8.98□□□□□ -0.97
TMEM88-202ENST00000574668 Q6ZVQ6 151 aa8.98□□□□□ -0.97
TMEM88-202ENST00000574668 UBL5Q9BZL1 73 aa8.98□□□□□ -0.97
TMEM88-202ENST00000574668 RPL37P61927 97 aaKnown RBP8.97□□□□□ -0.97
TMEM88-202ENST00000574668 A8MWP4 228 aa8.96□□□□□ -0.98
TMEM88-202ENST00000574668 BPY2O14599 106 aa8.96□□□□□ -0.98
TMEM88-202ENST00000574668 LINC00846Q9NV44 126 aa8.96□□□□□ -0.98
TMEM88-202ENST00000574668 CRCT1Q9UGL9 99 aa8.94□□□□□ -0.98
TMEM88-202ENST00000574668 PCOTHQ58A44 107 aa8.93□□□□□ -0.98
TMEM88-202ENST00000574668 NOTCH2NLQ7Z3S9 236 aa8.93□□□□□ -0.98
TMEM88-202ENST00000574668 IGKV3D-7A0A0C4DH55 119 aa8.92□□□□□ -0.98
TMEM88-202ENST00000574668 Q75L30 129 aa8.92□□□□□ -0.98
TMEM88-202ENST00000574668 PRR15Q8IV56 129 aa8.91□□□□□ -0.98
TMEM88-202ENST00000574668 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
TMEM88-202ENST00000574668 C20orf166-AS1Q96NR2 134 aa8.9□□□□□ -0.98
TMEM88-202ENST00000574668 C8orf17Q9NRJ1 99 aa8.9□□□□□ -0.98
TMEM88-202ENST00000574668 A8MUU9 505 aa8.89□□□□□ -0.99
TMEM88-202ENST00000574668 ATP11AUNQ6ZP68 121 aa8.89□□□□□ -0.99
TMEM88-202ENST00000574668 KRTAP16-1A8MUX0 517 aa8.88□□□□□ -0.99
TMEM88-202ENST00000574668 ACYP1P07311 99 aa8.88□□□□□ -0.99
TMEM88-202ENST00000574668 SCGB1A1P11684 91 aa8.87□□□□□ -0.99
TMEM88-202ENST00000574668 K7EQZ3 153 aa8.86□□□□□ -0.99
TMEM88-202ENST00000574668 FAM240AA0A1B0GVK7 77 aa8.84□□□□□ -0.99
TMEM88-202ENST00000574668 KRTAP19-2Q3LHN2 52 aa8.84□□□□□ -0.99
TMEM88-202ENST00000574668 J3QR89 54 aa8.82□□□□□ -1
TMEM88-202ENST00000574668 Q8N9L7 120 aa8.82□□□□□ -1
TMEM88-202ENST00000574668 MMP24-AS1A0A0U1RRL7 71 aa8.8□□□□□ -1
TMEM88-202ENST00000574668 MT1HP80294 61 aa8.8□□□□□ -1
TMEM88-202ENST00000574668 TMEM254Q8TBM7 123 aa8.79□□□□□ -1
TMEM88-202ENST00000574668 hDV103S1A0JD37 113 aa8.78□□□□□ -1
TMEM88-202ENST00000574668 CXCL6P80162 114 aa8.78□□□□□ -1
TMEM88-202ENST00000574668 MRPL34Q9BQ48 92 aaKnown RBP8.77□□□□□ -1.01
TMEM88-202ENST00000574668 WFDC13Q8IUB5 93 aa8.76□□□□□ -1.01
TMEM88-202ENST00000574668 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
TMEM88-202ENST00000574668 CASC2Q6XLA1 102 aa8.74□□□□□ -1.01
TMEM88-202ENST00000574668 NDUFS5O43920 106 aa8.73□□□□□ -1.01
TMEM88-202ENST00000574668 ATP5EP2Q5VTU8 51 aa8.72□□□□□ -1.01
TMEM88-202ENST00000574668 HCG22E2RYF7 251 aa8.71□□□□□ -1.02
TMEM88-202ENST00000574668 ZCCHC13Q8WW36 166 aaKnown RBP8.7□□□□□ -1.02
TMEM88-202ENST00000574668 LINC00643Q86TS7 51 aa8.69□□□□□ -1.02
TMEM88-202ENST00000574668 LORP23490 312 aaPredicted RBP8.68□□□□□ -1.02
TMEM88-202ENST00000574668 KRTAP10-6P60371 365 aaPredicted RBP8.68□□□□□ -1.02
TMEM88-202ENST00000574668 HIST1H4AP62805 103 aaKnown RBP8.63□□□□□ -1.03
TMEM88-202ENST00000574668 FLGP20930 4061 aaPredicted RBP8.59□□□□□ -1.03
TMEM88-202ENST00000574668 M0R2T5 61 aa8.59□□□□□ -1.03
TMEM88-202ENST00000574668 COX6B2Q6YFQ2 88 aa8.56□□□□□ -1.04
TMEM88-202ENST00000574668 SPINK7P58062 85 aa8.55□□□□□ -1.04
TMEM88-202ENST00000574668 TP53AIP1Q9HCN2 124 aa8.53□□□□□ -1.04
TMEM88-202ENST00000574668 Q5W150 140 aa8.52□□□□□ -1.05
TMEM88-202ENST00000574668 A0A087WVE0 104 aa8.51□□□□□ -1.05
TMEM88-202ENST00000574668 HRES1P13985 223 aa8.48□□□□□ -1.05
TMEM88-202ENST00000574668 RBM12B-AS1Q9P1G2 102 aa8.48□□□□□ -1.05
TMEM88-202ENST00000574668 IGKV2D-30A0A075B6S6 120 aa8.47□□□□□ -1.05
TMEM88-202ENST00000574668 FAM236DA0A1B0GTK5 79 aa8.47□□□□□ -1.05
TMEM88-202ENST00000574668 IGKV2-30P06310 120 aa8.47□□□□□ -1.05
TMEM88-202ENST00000574668 FAM236CP0DP71 79 aa8.47□□□□□ -1.05
TMEM88-202ENST00000574668 C7orf65Q6ZTY9 151 aa8.45□□□□□ -1.06
TMEM88-202ENST00000574668 SVIPQ8NHG7 77 aa8.42□□□□□ -1.06
TMEM88-202ENST00000574668 MT-ATP8P03928 68 aa8.41□□□□□ -1.06
TMEM88-202ENST00000574668 UQCRQO14949 82 aa8.4□□□□□ -1.06
TMEM88-202ENST00000574668 MPLKIPQ8TAP9 179 aa8.4□□□□□ -1.06
TMEM88-202ENST00000574668 IMUPQ9GZP8 106 aa8.39□□□□□ -1.07
TMEM88-202ENST00000574668 USH2AO75445 5202 aa8.38□□□□□ -1.07
TMEM88-202ENST00000574668 SSPOA2VEC9 5147 aa8.37□□□□□ -1.07
TMEM88-202ENST00000574668 TRAV22A0A0B4J277 110 aa8.37□□□□□ -1.07
TMEM88-202ENST00000574668 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.35□□□□□ -1.07
TMEM88-202ENST00000574668 KRTAP9-7A8MTY7 169 aa8.34□□□□□ -1.07
TMEM88-202ENST00000574668 H0Y9P7 68 aa8.32□□□□□ -1.08
TMEM88-202ENST00000574668 ATOX1O00244 68 aa8.31□□□□□ -1.08
TMEM88-202ENST00000574668 LOC101927531A0A1B0GV80 90 aa8.3□□□□□ -1.08
TMEM88-202ENST00000574668 OCR1Q9BZK8 76 aa8.3□□□□□ -1.08
TMEM88-202ENST00000574668 MP68P56378 58 aa8.27□□□□□ -1.09
TMEM88-202ENST00000574668 ANAPC13Q9BS18 74 aa8.27□□□□□ -1.09
TMEM88-202ENST00000574668 KRTAP9-8Q9BYQ0 159 aa8.27□□□□□ -1.09
TMEM88-202ENST00000574668 CYP4F30PQ9H0H9 118 aa8.27□□□□□ -1.09
TMEM88-202ENST00000574668 C4orf26Q17RF5 130 aa8.26□□□□□ -1.09
TMEM88-202ENST00000574668 FAM236AA0A1B0GUQ0 79 aa8.25□□□□□ -1.09
TMEM88-202ENST00000574668 FAM236BA0A1B0GV22 79 aa8.25□□□□□ -1.09
TMEM88-202ENST00000574668 C5orf47Q569G3 176 aa8.24□□□□□ -1.09
TMEM88-202ENST00000574668 C1orf64Q8NEQ6 169 aa8.23□□□□□ -1.09
TMEM88-202ENST00000574668 LINC00208Q96KT6 92 aa8.23□□□□□ -1.09
TMEM88-202ENST00000574668 H1FX-AS1Q4G0G2 97 aa8.21□□□□□ -1.1
TMEM88-202ENST00000574668 SMIM20Q8N5G0 67 aa8.2□□□□□ -1.1
TMEM88-202ENST00000574668 FCGBPQ9Y6R7 5405 aaPredicted RBP8.18□□□□□ -1.1
TMEM88-202ENST00000574668 H3BPC8 53 aa8.17□□□□□ -1.1
TMEM88-202ENST00000574668 TRAV7A0A075B6U4 112 aa8.15□□□□□ -1.1
TMEM88-202ENST00000574668 MT2AP02795 61 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms