RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 DSCR8Q96T75 97 aa5.14□□□□□ -1.59
GTF3C1-212ENST00000570129 IGHV6-1A0A0B4J1U7 121 aa5.12□□□□□ -1.59
GTF3C1-212ENST00000570129 A8MUU9 505 aa5.12□□□□□ -1.59
GTF3C1-212ENST00000570129 Q75L30 129 aa5.12□□□□□ -1.59
GTF3C1-212ENST00000570129 TRBV20-1A0A075B6N2 111 aa5.11□□□□□ -1.59
GTF3C1-212ENST00000570129 A0A0U1RQV1 116 aa5.11□□□□□ -1.59
GTF3C1-212ENST00000570129 C20orf166-AS1Q96NR2 134 aa5.11□□□□□ -1.59
GTF3C1-212ENST00000570129 LOC110117498A0A087WWA1 95 aa5.1□□□□□ -1.59
GTF3C1-212ENST00000570129 LINC00313P59037 77 aa5.1□□□□□ -1.59
GTF3C1-212ENST00000570129 MT1HP80294 61 aa5.1□□□□□ -1.59
GTF3C1-212ENST00000570129 SPCS1Q9Y6A9 102 aa5.09□□□□□ -1.59
GTF3C1-212ENST00000570129 PRO0461Q9UI25 63 aa5.08□□□□□ -1.6
GTF3C1-212ENST00000570129 A0A1B0GVX0 72 aa5.07□□□□□ -1.6
GTF3C1-212ENST00000570129 JMJD7-PLA2G4BH0Y9G9 81 aa5.07□□□□□ -1.6
GTF3C1-212ENST00000570129 COL5A1-AS1Q5SY13 56 aa5.07□□□□□ -1.6
GTF3C1-212ENST00000570129 ATP11AUNQ6ZP68 121 aa5.07□□□□□ -1.6
GTF3C1-212ENST00000570129 IGKV3D-7A0A0C4DH55 119 aa5.06□□□□□ -1.6
GTF3C1-212ENST00000570129 LYRM7Q5U5X0 104 aa5.06□□□□□ -1.6
GTF3C1-212ENST00000570129 PCP4P48539 62 aa5.05□□□□□ -1.6
GTF3C1-212ENST00000570129 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
GTF3C1-212ENST00000570129 H3BT86 120 aa5.04□□□□□ -1.6
GTF3C1-212ENST00000570129 K7EP34 96 aa5.03□□□□□ -1.6
GTF3C1-212ENST00000570129 KRTAP9-2Q9BYQ4 174 aa5.02□□□□□ -1.61
GTF3C1-212ENST00000570129 NREPQ16612 68 aa5.01□□□□□ -1.61
GTF3C1-212ENST00000570129 C8orf17Q9NRJ1 99 aa5.01□□□□□ -1.61
GTF3C1-212ENST00000570129 A8MWP4 228 aa5□□□□□ -1.61
GTF3C1-212ENST00000570129 PDE6GP18545 87 aa5□□□□□ -1.61
GTF3C1-212ENST00000570129 Q8N9L7 120 aa5□□□□□ -1.61
GTF3C1-212ENST00000570129 COX6B2Q6YFQ2 88 aa4.99□□□□□ -1.61
GTF3C1-212ENST00000570129 C8orf87E5RJ46 101 aa4.98□□□□□ -1.61
GTF3C1-212ENST00000570129 J3KT08 172 aa4.98□□□□□ -1.61
GTF3C1-212ENST00000570129 K7EQZ3 153 aa4.98□□□□□ -1.61
GTF3C1-212ENST00000570129 HRES1P13985 223 aa4.98□□□□□ -1.61
GTF3C1-212ENST00000570129 KRTAP10-6P60371 365 aaPredicted RBP4.98□□□□□ -1.61
GTF3C1-212ENST00000570129 PRR15Q8IV56 129 aa4.98□□□□□ -1.61
GTF3C1-212ENST00000570129 MMP24-AS1A0A0U1RRL7 71 aa4.97□□□□□ -1.61
GTF3C1-212ENST00000570129 Q6ZVQ6 151 aa4.96□□□□□ -1.62
GTF3C1-212ENST00000570129 LINC00846Q9NV44 126 aa4.96□□□□□ -1.62
GTF3C1-212ENST00000570129 A0A1B0GW54 56 aa4.95□□□□□ -1.62
GTF3C1-212ENST00000570129 BPY2O14599 106 aa4.95□□□□□ -1.62
GTF3C1-212ENST00000570129 NDUFB1O75438 58 aa4.95□□□□□ -1.62
GTF3C1-212ENST00000570129 Q8N9P0 234 aaPredicted RBP4.95□□□□□ -1.62
GTF3C1-212ENST00000570129 ZCCHC13Q8WW36 166 aaKnown RBP4.95□□□□□ -1.62
GTF3C1-212ENST00000570129 MPLKIPQ8TAP9 179 aa4.94□□□□□ -1.62
GTF3C1-212ENST00000570129 M0R2T5 61 aa4.93□□□□□ -1.62
GTF3C1-212ENST00000570129 ETDBQ3ZM63 59 aa4.93□□□□□ -1.62
GTF3C1-212ENST00000570129 Q5W150 140 aa4.92□□□□□ -1.62
GTF3C1-212ENST00000570129 SPINK7P58062 85 aa4.91□□□□□ -1.62
GTF3C1-212ENST00000570129 WFDC13Q8IUB5 93 aa4.91□□□□□ -1.62
GTF3C1-212ENST00000570129 GTF2H5Q6ZYL4 71 aa4.9□□□□□ -1.63
GTF3C1-212ENST00000570129 hDV103S1A0JD37 113 aa4.89□□□□□ -1.63
GTF3C1-212ENST00000570129 MRPL34Q9BQ48 92 aaKnown RBP4.89□□□□□ -1.63
GTF3C1-212ENST00000570129 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
GTF3C1-212ENST00000570129 F8W1H4 67 aa4.88□□□□□ -1.63
GTF3C1-212ENST00000570129 TMEM254Q8TBM7 123 aa4.88□□□□□ -1.63
GTF3C1-212ENST00000570129 A0A1B0GV90 55 aa4.87□□□□□ -1.63
GTF3C1-212ENST00000570129 KRTAP9-8Q9BYQ0 159 aa4.87□□□□□ -1.63
GTF3C1-212ENST00000570129 NDUFS5O43920 106 aa4.86□□□□□ -1.63
GTF3C1-212ENST00000570129 FAM236DA0A1B0GTK5 79 aa4.85□□□□□ -1.63
GTF3C1-212ENST00000570129 FAM236CP0DP71 79 aa4.85□□□□□ -1.63
GTF3C1-212ENST00000570129 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
GTF3C1-212ENST00000570129 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
GTF3C1-212ENST00000570129 CASC2Q6XLA1 102 aa4.84□□□□□ -1.63
GTF3C1-212ENST00000570129 HCG22E2RYF7 251 aa4.83□□□□□ -1.64
GTF3C1-212ENST00000570129 UBL5Q9BZL1 73 aa4.82□□□□□ -1.64
GTF3C1-212ENST00000570129 RBM12B-AS1Q9P1G2 102 aa4.81□□□□□ -1.64
GTF3C1-212ENST00000570129 IGKV2D-30A0A075B6S6 120 aa4.8□□□□□ -1.64
GTF3C1-212ENST00000570129 MT2AP02795 61 aa4.8□□□□□ -1.64
GTF3C1-212ENST00000570129 IGKV2-30P06310 120 aa4.8□□□□□ -1.64
GTF3C1-212ENST00000570129 KRTAP9-6A0A140TA67 174 aa4.79□□□□□ -1.64
GTF3C1-212ENST00000570129 MT1FP04733 61 aa4.78□□□□□ -1.64
GTF3C1-212ENST00000570129 FSIP2Q5CZC0 6907 aa4.76□□□□□ -1.65
GTF3C1-212ENST00000570129 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.74□□□□□ -1.65
GTF3C1-212ENST00000570129 CXCL6P80162 114 aa4.74□□□□□ -1.65
GTF3C1-212ENST00000570129 C4orf26Q17RF5 130 aa4.74□□□□□ -1.65
GTF3C1-212ENST00000570129 KRTAP3-1Q9BYR8 98 aa4.74□□□□□ -1.65
GTF3C1-212ENST00000570129 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
GTF3C1-212ENST00000570129 KRTAP4-12Q9BQ66 201 aa4.72□□□□□ -1.65
GTF3C1-212ENST00000570129 KRTAP9-3Q9BYQ3 159 aa4.71□□□□□ -1.66
GTF3C1-212ENST00000570129 USH2AO75445 5202 aa4.71□□□□□ -1.66
GTF3C1-212ENST00000570129 A0A087WVE0 104 aa4.7□□□□□ -1.66
GTF3C1-212ENST00000570129 KRTAP10-10P60014 251 aa4.7□□□□□ -1.66
GTF3C1-212ENST00000570129 H1FX-AS1Q4G0G2 97 aa4.7□□□□□ -1.66
GTF3C1-212ENST00000570129 C7orf65Q6ZTY9 151 aa4.7□□□□□ -1.66
GTF3C1-212ENST00000570129 KRTAP19-1Q8IUB9 90 aa4.7□□□□□ -1.66
GTF3C1-212ENST00000570129 ACYP1P07311 99 aa4.68□□□□□ -1.66
GTF3C1-212ENST00000570129 FAM240AA0A1B0GVK7 77 aa4.67□□□□□ -1.66
GTF3C1-212ENST00000570129 HIST1H4AP62805 103 aaKnown RBP4.67□□□□□ -1.66
GTF3C1-212ENST00000570129 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
GTF3C1-212ENST00000570129 LINC00643Q86TS7 51 aa4.63□□□□□ -1.67
GTF3C1-212ENST00000570129 CYP4F30PQ9H0H9 118 aa4.63□□□□□ -1.67
GTF3C1-212ENST00000570129 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
GTF3C1-212ENST00000570129 C1orf64Q8NEQ6 169 aa4.62□□□□□ -1.67
GTF3C1-212ENST00000570129 TP53AIP1Q9HCN2 124 aa4.62□□□□□ -1.67
GTF3C1-212ENST00000570129 C5orf47Q569G3 176 aa4.61□□□□□ -1.67
GTF3C1-212ENST00000570129 ATP5EP2Q5VTU8 51 aa4.59□□□□□ -1.67
GTF3C1-212ENST00000570129 H0Y9P7 68 aa4.57□□□□□ -1.68
GTF3C1-212ENST00000570129 LCA10Q71F78 164 aa4.57□□□□□ -1.68
GTF3C1-212ENST00000570129 TRAV22A0A0B4J277 110 aa4.56□□□□□ -1.68
GTF3C1-212ENST00000570129 UQCRQO14949 82 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms