RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 LINC00313P59037 77 aa6.77□□□□□ -1.33
CNOT1-220ENST00000569916 BATFQ16520 125 aa6.77□□□□□ -1.33
CNOT1-220ENST00000569916 COX6B2Q6YFQ2 88 aa6.76□□□□□ -1.33
CNOT1-220ENST00000569916 NOTCH2NLQ7Z3S9 236 aa6.76□□□□□ -1.33
CNOT1-220ENST00000569916 LYRM7Q5U5X0 104 aa6.75□□□□□ -1.33
CNOT1-220ENST00000569916 FLGP20930 4061 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-220ENST00000569916 IGHV6-1A0A0B4J1U7 121 aa6.74□□□□□ -1.33
CNOT1-220ENST00000569916 JMJD7-PLA2G4BH0Y9G9 81 aa6.74□□□□□ -1.33
CNOT1-220ENST00000569916 Q6ZQT0 140 aa6.74□□□□□ -1.33
CNOT1-220ENST00000569916 TRBV20-1A0A075B6N2 111 aa6.73□□□□□ -1.33
CNOT1-220ENST00000569916 LOC110117498A0A087WWA1 95 aa6.73□□□□□ -1.33
CNOT1-220ENST00000569916 A0A1B0GVX0 72 aa6.71□□□□□ -1.34
CNOT1-220ENST00000569916 C8orf87E5RJ46 101 aa6.7□□□□□ -1.34
CNOT1-220ENST00000569916 TAX1BP3O14907 124 aa6.7□□□□□ -1.34
CNOT1-220ENST00000569916 C14orf132Q9NPU4 83 aa6.7□□□□□ -1.34
CNOT1-220ENST00000569916 A0A1B0GW54 56 aa6.69□□□□□ -1.34
CNOT1-220ENST00000569916 C9orf118A6NHY6 69 aa6.69□□□□□ -1.34
CNOT1-220ENST00000569916 J3KT08 172 aa6.69□□□□□ -1.34
CNOT1-220ENST00000569916 KRTAP10-6P60371 365 aaPredicted RBP6.69□□□□□ -1.34
CNOT1-220ENST00000569916 M0R2T5 61 aa6.68□□□□□ -1.34
CNOT1-220ENST00000569916 PDE6GP18545 87 aa6.68□□□□□ -1.34
CNOT1-220ENST00000569916 A0A1W2PPM0 123 aa6.67□□□□□ -1.34
CNOT1-220ENST00000569916 H3BT86 120 aa6.65□□□□□ -1.34
CNOT1-220ENST00000569916 MTURNQ8N3F0 131 aa6.64□□□□□ -1.35
CNOT1-220ENST00000569916 A8MWP4 228 aa6.62□□□□□ -1.35
CNOT1-220ENST00000569916 NDUFB1O75438 58 aa6.62□□□□□ -1.35
CNOT1-220ENST00000569916 IGKV3D-7A0A0C4DH55 119 aa6.61□□□□□ -1.35
CNOT1-220ENST00000569916 KRTAP9-6A0A140TA67 174 aa6.6□□□□□ -1.35
CNOT1-220ENST00000569916 HRES1P13985 223 aa6.6□□□□□ -1.35
CNOT1-220ENST00000569916 C8orf17Q9NRJ1 99 aa6.6□□□□□ -1.35
CNOT1-220ENST00000569916 NREPQ16612 68 aa6.59□□□□□ -1.35
CNOT1-220ENST00000569916 Q8N9P0 234 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-220ENST00000569916 MPLKIPQ8TAP9 179 aa6.59□□□□□ -1.35
CNOT1-220ENST00000569916 K7EP34 96 aa6.58□□□□□ -1.36
CNOT1-220ENST00000569916 GTF2H5Q6ZYL4 71 aa6.58□□□□□ -1.36
CNOT1-220ENST00000569916 ZCCHC13Q8WW36 166 aaKnown RBP6.58□□□□□ -1.36
CNOT1-220ENST00000569916 SPCS1Q9Y6A9 102 aa6.58□□□□□ -1.36
CNOT1-220ENST00000569916 PRR15Q8IV56 129 aa6.56□□□□□ -1.36
CNOT1-220ENST00000569916 FAM236DA0A1B0GTK5 79 aa6.54□□□□□ -1.36
CNOT1-220ENST00000569916 FAM236CP0DP71 79 aa6.54□□□□□ -1.36
CNOT1-220ENST00000569916 Q6ZVQ6 151 aa6.54□□□□□ -1.36
CNOT1-220ENST00000569916 RBM12B-AS1Q9P1G2 102 aa6.54□□□□□ -1.36
CNOT1-220ENST00000569916 MMP24-AS1A0A0U1RRL7 71 aa6.53□□□□□ -1.36
CNOT1-220ENST00000569916 FSIP2Q5CZC0 6907 aa6.53□□□□□ -1.36
CNOT1-220ENST00000569916 K7EQZ3 153 aa6.52□□□□□ -1.37
CNOT1-220ENST00000569916 SPINK7P58062 85 aa6.51□□□□□ -1.37
CNOT1-220ENST00000569916 TMEM254Q8TBM7 123 aa6.5□□□□□ -1.37
CNOT1-220ENST00000569916 PRO0461Q9UI25 63 aa6.5□□□□□ -1.37
CNOT1-220ENST00000569916 MRPL34Q9BQ48 92 aaKnown RBP6.49□□□□□ -1.37
CNOT1-220ENST00000569916 BPY2O14599 106 aa6.48□□□□□ -1.37
CNOT1-220ENST00000569916 KRTAP9-8Q9BYQ0 159 aa6.48□□□□□ -1.37
CNOT1-220ENST00000569916 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
CNOT1-220ENST00000569916 hDV103S1A0JD37 113 aa6.46□□□□□ -1.38
CNOT1-220ENST00000569916 K7ERU9 68 aa6.46□□□□□ -1.38
CNOT1-220ENST00000569916 F8W1H4 67 aa6.45□□□□□ -1.38
CNOT1-220ENST00000569916 Q8N9L7 120 aa6.43□□□□□ -1.38
CNOT1-220ENST00000569916 WFDC13Q8IUB5 93 aa6.42□□□□□ -1.38
CNOT1-220ENST00000569916 NDUFS5O43920 106 aa6.41□□□□□ -1.38
CNOT1-220ENST00000569916 LINC00846Q9NV44 126 aa6.41□□□□□ -1.38
CNOT1-220ENST00000569916 MT2AP02795 61 aa6.4□□□□□ -1.38
CNOT1-220ENST00000569916 CASC2Q6XLA1 102 aa6.38□□□□□ -1.39
CNOT1-220ENST00000569916 UBL5Q9BZL1 73 aa6.38□□□□□ -1.39
CNOT1-220ENST00000569916 Q5W150 140 aa6.37□□□□□ -1.39
CNOT1-220ENST00000569916 J3QR89 54 aa6.36□□□□□ -1.39
CNOT1-220ENST00000569916 MT1FP04733 61 aa6.35□□□□□ -1.39
CNOT1-220ENST00000569916 HCG22E2RYF7 251 aa6.34□□□□□ -1.39
CNOT1-220ENST00000569916 ETDBQ3ZM63 59 aa6.33□□□□□ -1.4
CNOT1-220ENST00000569916 IGKV2D-30A0A075B6S6 120 aa6.32□□□□□ -1.4
CNOT1-220ENST00000569916 IGKV2-30P06310 120 aa6.32□□□□□ -1.4
CNOT1-220ENST00000569916 C7orf65Q6ZTY9 151 aa6.32□□□□□ -1.4
CNOT1-220ENST00000569916 USH2AO75445 5202 aa6.32□□□□□ -1.4
CNOT1-220ENST00000569916 CXCL6P80162 114 aa6.29□□□□□ -1.4
CNOT1-220ENST00000569916 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
CNOT1-220ENST00000569916 H1FX-AS1Q4G0G2 97 aa6.27□□□□□ -1.41
CNOT1-220ENST00000569916 KRTAP9-3Q9BYQ3 159 aa6.27□□□□□ -1.41
CNOT1-220ENST00000569916 SSPOA2VEC9 5147 aa6.25□□□□□ -1.41
CNOT1-220ENST00000569916 PCP4P48539 62 aa6.24□□□□□ -1.41
CNOT1-220ENST00000569916 SCGB1A1P11684 91 aa6.23□□□□□ -1.41
CNOT1-220ENST00000569916 C4orf26Q17RF5 130 aa6.21□□□□□ -1.42
CNOT1-220ENST00000569916 FAM240AA0A1B0GVK7 77 aa6.19□□□□□ -1.42
CNOT1-220ENST00000569916 TP53AIP1Q9HCN2 124 aa6.18□□□□□ -1.42
CNOT1-220ENST00000569916 ACYP1P07311 99 aa6.17□□□□□ -1.42
CNOT1-220ENST00000569916 KRTAP3-1Q9BYR8 98 aa6.14□□□□□ -1.43
CNOT1-220ENST00000569916 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
CNOT1-220ENST00000569916 ATP5EP2Q5VTU8 51 aa6.12□□□□□ -1.43
CNOT1-220ENST00000569916 MT-ATP8P03928 68 aa6.11□□□□□ -1.43
CNOT1-220ENST00000569916 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
CNOT1-220ENST00000569916 C1orf64Q8NEQ6 169 aa6.1□□□□□ -1.43
CNOT1-220ENST00000569916 FCGBPQ9Y6R7 5405 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-220ENST00000569916 TRAV22A0A0B4J277 110 aa6.07□□□□□ -1.44
CNOT1-220ENST00000569916 HIST1H4AP62805 103 aaKnown RBP6.07□□□□□ -1.44
CNOT1-220ENST00000569916 KRTAP19-4Q3LI73 84 aa6.07□□□□□ -1.44
CNOT1-220ENST00000569916 S4R3F8 94 aa6.07□□□□□ -1.44
CNOT1-220ENST00000569916 C5orf47Q569G3 176 aa6.06□□□□□ -1.44
CNOT1-220ENST00000569916 CYP4F30PQ9H0H9 118 aa6.06□□□□□ -1.44
CNOT1-220ENST00000569916 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
CNOT1-220ENST00000569916 LCA10Q71F78 164 aa6.04□□□□□ -1.44
CNOT1-220ENST00000569916 LOC101927531A0A1B0GV80 90 aa6.03□□□□□ -1.44
CNOT1-220ENST00000569916 IMUPQ9GZP8 106 aa6.03□□□□□ -1.44
CNOT1-220ENST00000569916 A0A087WVE0 104 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms