RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 ATXN8Q156A1 80 aa6.26□□□□□ -1.41
SNX29-207ENST00000568949 H3BUT2 72 aa6.25□□□□□ -1.41
SNX29-207ENST00000568949 ANKRD29Q8N6D5 301 aa6.25□□□□□ -1.41
SNX29-207ENST00000568949 A8MUU9 505 aa6.24□□□□□ -1.41
SNX29-207ENST00000568949 KRTAP19-6Q3LI70 58 aa6.24□□□□□ -1.41
SNX29-207ENST00000568949 TRBV7-4A0A0J9YYF1 115 aa6.22□□□□□ -1.41
SNX29-207ENST00000568949 KRTAP6-3Q3LI67 103 aa6.22□□□□□ -1.41
SNX29-207ENST00000568949 DSCR8Q96T75 97 aa6.22□□□□□ -1.41
SNX29-207ENST00000568949 FAM236DA0A1B0GTK5 79 aa6.21□□□□□ -1.42
SNX29-207ENST00000568949 FAM236CP0DP71 79 aa6.21□□□□□ -1.42
SNX29-207ENST00000568949 RBM3P98179 157 aaKnown RBP6.21□□□□□ -1.42
SNX29-207ENST00000568949 BATFQ16520 125 aa6.21□□□□□ -1.42
SNX29-207ENST00000568949 JMJD7-PLA2G4BH0Y9G9 81 aa6.2□□□□□ -1.42
SNX29-207ENST00000568949 BAALC-AS2P0C853 105 aa6.2□□□□□ -1.42
SNX29-207ENST00000568949 A0A087WSZ3 146 aa6.18□□□□□ -1.42
SNX29-207ENST00000568949 PDE6GP18545 87 aa6.18□□□□□ -1.42
SNX29-207ENST00000568949 A0A1B0GW54 56 aa6.17□□□□□ -1.42
SNX29-207ENST00000568949 C9JAW5 83 aa6.17□□□□□ -1.42
SNX29-207ENST00000568949 CCKP06307 115 aa6.17□□□□□ -1.42
SNX29-207ENST00000568949 C9orf118A6NHY6 69 aa6.16□□□□□ -1.42
SNX29-207ENST00000568949 MPLKIPQ8TAP9 179 aa6.16□□□□□ -1.42
SNX29-207ENST00000568949 RBM12B-AS1Q9P1G2 102 aa6.16□□□□□ -1.42
SNX29-207ENST00000568949 A0A1W2PNM2 257 aa6.14□□□□□ -1.43
SNX29-207ENST00000568949 NAA38Q9BRA0 125 aaKnown RBP6.13□□□□□ -1.43
SNX29-207ENST00000568949 A0A1B0GV72 72 aa6.12□□□□□ -1.43
SNX29-207ENST00000568949 A0A1W2PPM0 123 aa6.12□□□□□ -1.43
SNX29-207ENST00000568949 KRTAP16-1A8MUX0 517 aa6.12□□□□□ -1.43
SNX29-207ENST00000568949 HRES1P13985 223 aa6.12□□□□□ -1.43
SNX29-207ENST00000568949 COL5A1-AS1Q5SY13 56 aa6.12□□□□□ -1.43
SNX29-207ENST00000568949 VPS25Q9BRG1 176 aa6.12□□□□□ -1.43
SNX29-207ENST00000568949 H3BT86 120 aa6.11□□□□□ -1.43
SNX29-207ENST00000568949 LOC110117498A0A087WWA1 95 aa6.1□□□□□ -1.43
SNX29-207ENST00000568949 TAX1BP3O14907 124 aa6.1□□□□□ -1.43
SNX29-207ENST00000568949 NEBP20929 6669 aa6.09□□□□□ -1.43
SNX29-207ENST00000568949 J3KT08 172 aa6.09□□□□□ -1.43
SNX29-207ENST00000568949 DSCR10P59022 87 aa6.09□□□□□ -1.43
SNX29-207ENST00000568949 SIGMAR1Q99720 223 aa6.09□□□□□ -1.43
SNX29-207ENST00000568949 IGKV4-1P06312 121 aa6.08□□□□□ -1.44
SNX29-207ENST00000568949 Q6ZQT0 140 aa6.06□□□□□ -1.44
SNX29-207ENST00000568949 NOTCH2NLQ7Z3S9 236 aa6.06□□□□□ -1.44
SNX29-207ENST00000568949 NDUFB1O75438 58 aa6.05□□□□□ -1.44
SNX29-207ENST00000568949 LINC00313P59037 77 aa6.05□□□□□ -1.44
SNX29-207ENST00000568949 LINC00472Q9H8W2 130 aa6.05□□□□□ -1.44
SNX29-207ENST00000568949 SPCS1Q9Y6A9 102 aa6.05□□□□□ -1.44
SNX29-207ENST00000568949 MTURNQ8N3F0 131 aa6.04□□□□□ -1.44
SNX29-207ENST00000568949 A0A0A0MQY5 61 aa6.02□□□□□ -1.45
SNX29-207ENST00000568949 C8orf87E5RJ46 101 aa6.02□□□□□ -1.45
SNX29-207ENST00000568949 C14orf132Q9NPU4 83 aa6.02□□□□□ -1.45
SNX29-207ENST00000568949 A8MWP4 228 aa6.01□□□□□ -1.45
SNX29-207ENST00000568949 GTF2H5Q6ZYL4 71 aa6.01□□□□□ -1.45
SNX29-207ENST00000568949 NREPQ16612 68 aa6□□□□□ -1.45
SNX29-207ENST00000568949 A0A1B0GVX0 72 aa5.99□□□□□ -1.45
SNX29-207ENST00000568949 IGHV6-1A0A0B4J1U7 121 aa5.98□□□□□ -1.45
SNX29-207ENST00000568949 PCP4L1A6NKN8 68 aa5.98□□□□□ -1.45
SNX29-207ENST00000568949 DEFB116Q30KQ4 102 aa5.98□□□□□ -1.45
SNX29-207ENST00000568949 K7EP34 96 aa5.97□□□□□ -1.45
SNX29-207ENST00000568949 Q8N9P0 234 aaPredicted RBP5.96□□□□□ -1.46
SNX29-207ENST00000568949 F8W1H4 67 aa5.94□□□□□ -1.46
SNX29-207ENST00000568949 KRTAP20-1Q3LI63 56 aa5.94□□□□□ -1.46
SNX29-207ENST00000568949 MUC12Q9UKN1 5478 aa5.92□□□□□ -1.46
SNX29-207ENST00000568949 BPY2O14599 106 aa5.9□□□□□ -1.46
SNX29-207ENST00000568949 SPINK7P58062 85 aa5.9□□□□□ -1.46
SNX29-207ENST00000568949 UBL5Q9BZL1 73 aa5.9□□□□□ -1.46
SNX29-207ENST00000568949 PRR15Q8IV56 129 aa5.89□□□□□ -1.47
SNX29-207ENST00000568949 ZCCHC13Q8WW36 166 aaKnown RBP5.88□□□□□ -1.47
SNX29-207ENST00000568949 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
SNX29-207ENST00000568949 PRO0461Q9UI25 63 aa5.88□□□□□ -1.47
SNX29-207ENST00000568949 IGKV3D-7A0A0C4DH55 119 aa5.87□□□□□ -1.47
SNX29-207ENST00000568949 Q6ZVQ6 151 aa5.86□□□□□ -1.47
SNX29-207ENST00000568949 WFDC13Q8IUB5 93 aa5.83□□□□□ -1.48
SNX29-207ENST00000568949 TMEM254Q8TBM7 123 aa5.83□□□□□ -1.48
SNX29-207ENST00000568949 hDV103S1A0JD37 113 aa5.82□□□□□ -1.48
SNX29-207ENST00000568949 MRPL34Q9BQ48 92 aaKnown RBP5.82□□□□□ -1.48
SNX29-207ENST00000568949 K7EQZ3 153 aa5.81□□□□□ -1.48
SNX29-207ENST00000568949 ETDBQ3ZM63 59 aa5.81□□□□□ -1.48
SNX29-207ENST00000568949 ACYP1P07311 99 aa5.8□□□□□ -1.48
SNX29-207ENST00000568949 MMP24-AS1A0A0U1RRL7 71 aa5.79□□□□□ -1.48
SNX29-207ENST00000568949 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
SNX29-207ENST00000568949 A6NN06 94 aa5.79□□□□□ -1.48
SNX29-207ENST00000568949 NDUFS5O43920 106 aa5.78□□□□□ -1.48
SNX29-207ENST00000568949 CXCL6P80162 114 aa5.77□□□□□ -1.49
SNX29-207ENST00000568949 KRTAP5-9P26371 169 aa5.76□□□□□ -1.49
SNX29-207ENST00000568949 CASC2Q6XLA1 102 aa5.76□□□□□ -1.49
SNX29-207ENST00000568949 H1FX-AS1Q4G0G2 97 aa5.75□□□□□ -1.49
SNX29-207ENST00000568949 FAM240AA0A1B0GVK7 77 aa5.74□□□□□ -1.49
SNX29-207ENST00000568949 HCG22E2RYF7 251 aa5.72□□□□□ -1.49
SNX29-207ENST00000568949 Q8N9L7 120 aa5.71□□□□□ -1.5
SNX29-207ENST00000568949 KMT2DO14686 5537 aa5.7□□□□□ -1.5
SNX29-207ENST00000568949 ATP5EP2Q5VTU8 51 aa5.7□□□□□ -1.5
SNX29-207ENST00000568949 MT1BP07438 61 aa5.69□□□□□ -1.5
SNX29-207ENST00000568949 KRTAP2-3P0C7H8 128 aa5.69□□□□□ -1.5
SNX29-207ENST00000568949 KRTAP2-4Q9BYR9 128 aa5.69□□□□□ -1.5
SNX29-207ENST00000568949 TP53AIP1Q9HCN2 124 aa5.69□□□□□ -1.5
SNX29-207ENST00000568949 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
SNX29-207ENST00000568949 J3QR89 54 aa5.67□□□□□ -1.5
SNX29-207ENST00000568949 Q5VV11 94 aa5.67□□□□□ -1.5
SNX29-207ENST00000568949 KRTAP10-5P60370 271 aa5.66□□□□□ -1.5
SNX29-207ENST00000568949 C7orf65Q6ZTY9 151 aa5.66□□□□□ -1.5
SNX29-207ENST00000568949 KRTAP19-8Q3LI54 63 aa5.64□□□□□ -1.51
SNX29-207ENST00000568949 A0A1B0GV90 55 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms