RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 FAT4Q6V0I7 4981 aa4.43□□□□□ -1.7
MAP1LC3B-205ENST00000564638 A8MWP4 228 aa4.42□□□□□ -1.7
MAP1LC3B-205ENST00000564638 TMEM258P61165 79 aa4.42□□□□□ -1.7
MAP1LC3B-205ENST00000564638 DEFB116Q30KQ4 102 aa4.42□□□□□ -1.7
MAP1LC3B-205ENST00000564638 LINC00472Q9H8W2 130 aa4.42□□□□□ -1.7
MAP1LC3B-205ENST00000564638 NDUFB1O75438 58 aa4.41□□□□□ -1.7
MAP1LC3B-205ENST00000564638 HRCT1Q6UXD1 115 aa4.41□□□□□ -1.7
MAP1LC3B-205ENST00000564638 KRTAP9-2Q9BYQ4 174 aa4.41□□□□□ -1.7
MAP1LC3B-205ENST00000564638 OCR1Q9BZK8 76 aa4.41□□□□□ -1.7
MAP1LC3B-205ENST00000564638 ANAPC11Q9NYG5 84 aa4.41□□□□□ -1.7
MAP1LC3B-205ENST00000564638 PKHD1L1Q86WI1 4243 aa4.41□□□□□ -1.7
MAP1LC3B-205ENST00000564638 KLKP1Q107X0 134 aa4.4□□□□□ -1.71
MAP1LC3B-205ENST00000564638 FAM229BQ4G0N7 80 aa4.4□□□□□ -1.71
MAP1LC3B-205ENST00000564638 WFDC13Q8IUB5 93 aa4.4□□□□□ -1.71
MAP1LC3B-205ENST00000564638 PRR15Q8IV56 129 aa4.4□□□□□ -1.71
MAP1LC3B-205ENST00000564638 CYSTM1Q9H1C7 97 aa4.4□□□□□ -1.71
MAP1LC3B-205ENST00000564638 KRTAP9-6A0A140TA67 174 aa4.39□□□□□ -1.71
MAP1LC3B-205ENST00000564638 CD164Q04900 197 aa4.39□□□□□ -1.71
MAP1LC3B-205ENST00000564638 SSBP3-AS1Q7Z2R9 100 aa4.39□□□□□ -1.71
MAP1LC3B-205ENST00000564638 TMEM254Q8TBM7 123 aa4.39□□□□□ -1.71
MAP1LC3B-205ENST00000564638 NDUFC1O43677 76 aa4.38□□□□□ -1.71
MAP1LC3B-205ENST00000564638 SPINK6Q6UWN8 80 aa4.38□□□□□ -1.71
MAP1LC3B-205ENST00000564638 CASC2Q6XLA1 102 aa4.38□□□□□ -1.71
MAP1LC3B-205ENST00000564638 Q96NJ1 140 aa4.37□□□□□ -1.71
MAP1LC3B-205ENST00000564638 SNURFQ9Y675 71 aa4.37□□□□□ -1.71
MAP1LC3B-205ENST00000564638 MUC2Q02817 5179 aa4.37□□□□□ -1.71
MAP1LC3B-205ENST00000564638 A0A0U1RQV1 116 aa4.36□□□□□ -1.71
MAP1LC3B-205ENST00000564638 MMP24-AS1A0A0U1RRL7 71 aa4.36□□□□□ -1.71
MAP1LC3B-205ENST00000564638 FAM236DA0A1B0GTK5 79 aa4.36□□□□□ -1.71
MAP1LC3B-205ENST00000564638 KRTAP29-1A8MX34 341 aaPredicted RBP4.36□□□□□ -1.71
MAP1LC3B-205ENST00000564638 FAM236CP0DP71 79 aa4.36□□□□□ -1.71
MAP1LC3B-205ENST00000564638 A0A1B0GVX0 72 aa4.35□□□□□ -1.71
MAP1LC3B-205ENST00000564638 H7BZZ5 65 aa4.35□□□□□ -1.71
MAP1LC3B-205ENST00000564638 OXTP01178 125 aa4.35□□□□□ -1.71
MAP1LC3B-205ENST00000564638 C5orf47Q569G3 176 aa4.35□□□□□ -1.71
MAP1LC3B-205ENST00000564638 ATP5EP56381 51 aaPredicted RBP4.34□□□□□ -1.71
MAP1LC3B-205ENST00000564638 C8orf17Q9NRJ1 99 aa4.34□□□□□ -1.71
MAP1LC3B-205ENST00000564638 TNXBP22105 4242 aa4.33□□□□□ -1.72
MAP1LC3B-205ENST00000564638 A0A087X002 238 aa4.33□□□□□ -1.72
MAP1LC3B-205ENST00000564638 IGHV6-1A0A0B4J1U7 121 aa4.33□□□□□ -1.72
MAP1LC3B-205ENST00000564638 hDV103S1A0JD37 113 aa4.33□□□□□ -1.72
MAP1LC3B-205ENST00000564638 MP68P56378 58 aa4.33□□□□□ -1.72
MAP1LC3B-205ENST00000564638 ASB16-AS1Q495Z4 193 aa4.33□□□□□ -1.72
MAP1LC3B-205ENST00000564638 KRTAP13-2Q52LG2 175 aa4.33□□□□□ -1.72
MAP1LC3B-205ENST00000564638 KRTAP1-4P0C5Y4 121 aa4.32□□□□□ -1.72
MAP1LC3B-205ENST00000564638 LIMD2Q9BT23 127 aa4.32□□□□□ -1.72
MAP1LC3B-205ENST00000564638 H3BPC8 53 aa4.31□□□□□ -1.72
MAP1LC3B-205ENST00000564638 C8orf87E5RJ46 101 aa4.3□□□□□ -1.72
MAP1LC3B-205ENST00000564638 H0Y9P7 68 aa4.3□□□□□ -1.72
MAP1LC3B-205ENST00000564638 RPS28P62857 69 aaKnown RBP4.3□□□□□ -1.72
MAP1LC3B-205ENST00000564638 Q5XG85 94 aa4.3□□□□□ -1.72
MAP1LC3B-205ENST00000564638 PRR26Q8N8Z3 221 aa4.3□□□□□ -1.72
MAP1LC3B-205ENST00000564638 ZCCHC13Q8WW36 166 aaKnown RBP4.3□□□□□ -1.72
MAP1LC3B-205ENST00000564638 TP53AIP1Q9HCN2 124 aa4.3□□□□□ -1.72
MAP1LC3B-205ENST00000564638 MT1HL1P0DM35 61 aa4.29□□□□□ -1.72
MAP1LC3B-205ENST00000564638 TYMSOSQ8TAI1 123 aa4.29□□□□□ -1.72
MAP1LC3B-205ENST00000564638 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
MAP1LC3B-205ENST00000564638 TRAV22A0A0B4J277 110 aa4.28□□□□□ -1.72
MAP1LC3B-205ENST00000564638 NDUFS5O43920 106 aa4.28□□□□□ -1.72
MAP1LC3B-205ENST00000564638 SERP1Q9Y6X1 66 aa4.28□□□□□ -1.72
MAP1LC3B-205ENST00000564638 KRTAP10-8P60410 259 aa4.27□□□□□ -1.73
MAP1LC3B-205ENST00000564638 LINC00208Q96KT6 92 aa4.27□□□□□ -1.73
MAP1LC3B-205ENST00000564638 SPINK1P00995 79 aa4.26□□□□□ -1.73
MAP1LC3B-205ENST00000564638 C1orf195Q5TG92 126 aa4.26□□□□□ -1.73
MAP1LC3B-205ENST00000564638 LINC00304Q8N9R0 145 aa4.26□□□□□ -1.73
MAP1LC3B-205ENST00000564638 C1orf64Q8NEQ6 169 aa4.25□□□□□ -1.73
MAP1LC3B-205ENST00000564638 RPS29P62273 56 aaKnown RBP4.24□□□□□ -1.73
MAP1LC3B-205ENST00000564638 SPAG11AQ6PDA7 123 aa4.24□□□□□ -1.73
MAP1LC3B-205ENST00000564638 LINC00313P59037 77 aa4.23□□□□□ -1.73
MAP1LC3B-205ENST00000564638 NOTCH2NLQ7Z3S9 236 aa4.23□□□□□ -1.73
MAP1LC3B-205ENST00000564638 LPAP08519 4548 aa4.23□□□□□ -1.73
MAP1LC3B-205ENST00000564638 SPANXA2-OT1Q8N9U9 137 aa4.21□□□□□ -1.74
MAP1LC3B-205ENST00000564638 FSIP2Q5CZC0 6907 aa4.21□□□□□ -1.74
MAP1LC3B-205ENST00000564638 LOC101927531A0A1B0GV80 90 aa4.2□□□□□ -1.74
MAP1LC3B-205ENST00000564638 CYP4F30PQ9H0H9 118 aa4.2□□□□□ -1.74
MAP1LC3B-205ENST00000564638 SMIM26A0A096LP01 95 aa4.18□□□□□ -1.74
MAP1LC3B-205ENST00000564638 PRR4Q16378 134 aa4.18□□□□□ -1.74
MAP1LC3B-205ENST00000564638 Q8N9P0 234 aaPredicted RBP4.18□□□□□ -1.74
MAP1LC3B-205ENST00000564638 KRTAP16-1A8MUX0 517 aa4.17□□□□□ -1.74
MAP1LC3B-205ENST00000564638 PCOTHQ58A44 107 aa4.17□□□□□ -1.74
MAP1LC3B-205ENST00000564638 KRTAP13-3Q3SY46 172 aa4.15□□□□□ -1.75
MAP1LC3B-205ENST00000564638 Q5W150 140 aa4.15□□□□□ -1.75
MAP1LC3B-205ENST00000564638 IGLV7-46A0A075B6I9 117 aa4.14□□□□□ -1.75
MAP1LC3B-205ENST00000564638 RETNLBQ9BQ08 111 aa4.13□□□□□ -1.75
MAP1LC3B-205ENST00000564638 IGKV2-30P06310 120 aa4.11□□□□□ -1.75
MAP1LC3B-205ENST00000564638 FP248Q71RG6 208 aaPredicted RBP4.11□□□□□ -1.75
MAP1LC3B-205ENST00000564638 XP32Q5T750 250 aa4.09□□□□□ -1.75
MAP1LC3B-205ENST00000564638 COA5Q86WW8 74 aa4.09□□□□□ -1.75
MAP1LC3B-205ENST00000564638 IGKV2D-30A0A075B6S6 120 aa4.08□□□□□ -1.76
MAP1LC3B-205ENST00000564638 C4orf26Q17RF5 130 aa4.08□□□□□ -1.76
MAP1LC3B-205ENST00000564638 C9orf92A6NGG3 77 aa4.07□□□□□ -1.76
MAP1LC3B-205ENST00000564638 HRES1P13985 223 aa4.07□□□□□ -1.76
MAP1LC3B-205ENST00000564638 MPLKIPQ8TAP9 179 aa4.07□□□□□ -1.76
MAP1LC3B-205ENST00000564638 A8MUU9 505 aa4.06□□□□□ -1.76
MAP1LC3B-205ENST00000564638 C7orf65Q6ZTY9 151 aa4.06□□□□□ -1.76
MAP1LC3B-205ENST00000564638 C20orf166-AS1Q96NR2 134 aa4.06□□□□□ -1.76
MAP1LC3B-205ENST00000564638 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
MAP1LC3B-205ENST00000564638 V9GYY9 64 aa4.06□□□□□ -1.76
MAP1LC3B-205ENST00000564638 LOC100996750A0A140TA64 210 aa4.05□□□□□ -1.76
MAP1LC3B-205ENST00000564638 Q1T7F1 81 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms