RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 MUC6Q6W4X9 2439 aa3.18□□□□□ -1.9
CHD9-210ENST00000564582 EPG5Q9HCE0 2579 aa3.18□□□□□ -1.9
CHD9-210ENST00000564582 ALMS1Q8TCU4 4167 aa3.18□□□□□ -1.9
CHD9-210ENST00000564582 ASPMQ8IZT6 3477 aa3.17□□□□□ -1.9
CHD9-210ENST00000564582 LRRK2Q5S007 2527 aa3.17□□□□□ -1.9
CHD9-210ENST00000564582 CHTF8P0CG12 524 aa3.17□□□□□ -1.9
CHD9-210ENST00000564582 IGF2RP11717 2491 aa3.17□□□□□ -1.9
CHD9-210ENST00000564582 KMT2BQ9UMN6 2715 aaPredicted RBP3.17□□□□□ -1.9
CHD9-210ENST00000564582 GCN1Q92616 2671 aaKnown RBP3.16□□□□□ -1.9
CHD9-210ENST00000564582 A0A1B0GU33 70 aa3.16□□□□□ -1.9
CHD9-210ENST00000564582 PANO1I0J062 215 aa3.16□□□□□ -1.9
CHD9-210ENST00000564582 COL12A1Q99715 3063 aa3.16□□□□□ -1.9
CHD9-210ENST00000564582 SPTBN4Q9H254 2564 aa3.16□□□□□ -1.9
CHD9-210ENST00000564582 TEX15Q9BXT5 2789 aa3.16□□□□□ -1.9
CHD9-210ENST00000564582 NBPF19A0A087WUL8 3843 aa3.15□□□□□ -1.91
CHD9-210ENST00000564582 NUPR2A6NF83 97 aa3.15□□□□□ -1.91
CHD9-210ENST00000564582 UBE2DNLQ8IWF7 75 aa3.15□□□□□ -1.91
CHD9-210ENST00000564582 CHD8Q9HCK8 2581 aa3.14□□□□□ -1.91
CHD9-210ENST00000564582 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
CHD9-210ENST00000564582 CASC10Q5T4H9 136 aa3.14□□□□□ -1.91
CHD9-210ENST00000564582 LINC00304Q8N9R0 145 aa3.14□□□□□ -1.91
CHD9-210ENST00000564582 SPACA4Q8TDM5 124 aa3.14□□□□□ -1.91
CHD9-210ENST00000564582 SVEP1Q4LDE5 3571 aa3.13□□□□□ -1.91
CHD9-210ENST00000564582 CRYBG3Q68DQ2 2970 aa3.13□□□□□ -1.91
CHD9-210ENST00000564582 NBEAL2Q6ZNJ1 2754 aa3.13□□□□□ -1.91
CHD9-210ENST00000564582 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
CHD9-210ENST00000564582 SPINK6Q6UWN8 80 aa3.12□□□□□ -1.91
CHD9-210ENST00000564582 KRTAP11-1Q8IUC1 163 aa3.12□□□□□ -1.91
CHD9-210ENST00000564582 ABCA12Q86UK0 2595 aa3.12□□□□□ -1.91
CHD9-210ENST00000564582 MYO18BQ8IUG5 2567 aa3.11□□□□□ -1.91
CHD9-210ENST00000564582 FAM208BQ5VWN6 2430 aa3.11□□□□□ -1.91
CHD9-210ENST00000564582 CELSR2Q9HCU4 2923 aa3.11□□□□□ -1.91
CHD9-210ENST00000564582 H1FX-AS1Q4G0G2 97 aa3.11□□□□□ -1.91
CHD9-210ENST00000564582 AKAP9Q99996 3911 aa3.11□□□□□ -1.91
CHD9-210ENST00000564582 SONP18583 2426 aaKnown RBP3.11□□□□□ -1.91
CHD9-210ENST00000564582 LAMA5O15230 3695 aa3.1□□□□□ -1.91
CHD9-210ENST00000564582 MTORP42345 2549 aa3.1□□□□□ -1.91
CHD9-210ENST00000564582 K7EIL1 84 aa3.1□□□□□ -1.91
CHD9-210ENST00000564582 KRTAP12-2P59991 146 aa3.1□□□□□ -1.91
CHD9-210ENST00000564582 RPS29P62273 56 aaKnown RBP3.1□□□□□ -1.91
CHD9-210ENST00000564582 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
CHD9-210ENST00000564582 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
CHD9-210ENST00000564582 F8P00451 2351 aa3.1□□□□□ -1.91
CHD9-210ENST00000564582 ZANQ9Y493 2812 aa3.1□□□□□ -1.91
CHD9-210ENST00000564582 SETD2Q9BYW2 2564 aaPredicted RBP3.09□□□□□ -1.91
CHD9-210ENST00000564582 Q6ZSA8 131 aa3.09□□□□□ -1.91
CHD9-210ENST00000564582 CIRBP-AS1Q8TBR5 109 aa3.09□□□□□ -1.91
CHD9-210ENST00000564582 PSORS1C2Q9UIG4 136 aa3.09□□□□□ -1.91
CHD9-210ENST00000564582 PIEZO1Q92508 2521 aa3.08□□□□□ -1.92
CHD9-210ENST00000564582 NBDYA0A0U1RRE5 68 aa3.08□□□□□ -1.92
CHD9-210ENST00000564582 SPINT4Q6UDR6 99 aa3.08□□□□□ -1.92
CHD9-210ENST00000564582 CFAP46Q8IYW2 2715 aa3.08□□□□□ -1.92
CHD9-210ENST00000564582 ITPR3Q14573 2671 aa3.07□□□□□ -1.92
CHD9-210ENST00000564582 RELNP78509 3460 aa3.07□□□□□ -1.92
CHD9-210ENST00000564582 NOTCH2Q04721 2471 aa3.07□□□□□ -1.92
CHD9-210ENST00000564582 H0YAA0 97 aa3.07□□□□□ -1.92
CHD9-210ENST00000564582 SPINK1P00995 79 aa3.07□□□□□ -1.92
CHD9-210ENST00000564582 RPL37P61927 97 aaKnown RBP3.07□□□□□ -1.92
CHD9-210ENST00000564582 CRIPTQ9P021 101 aa3.07□□□□□ -1.92
CHD9-210ENST00000564582 VPS13CQ709C8 3753 aa3.06□□□□□ -1.92
CHD9-210ENST00000564582 CCDC168Q8NDH2 2452 aa3.06□□□□□ -1.92
CHD9-210ENST00000564582 C20orf166-AS1Q96NR2 134 aa3.06□□□□□ -1.92
CHD9-210ENST00000564582 TENM2Q9NT68 2774 aa3.06□□□□□ -1.92
CHD9-210ENST00000564582 FBN2P35556 2912 aa3.06□□□□□ -1.92
CHD9-210ENST00000564582 POLQO75417 2590 aa3.06□□□□□ -1.92
CHD9-210ENST00000564582 NF1P21359 2839 aa3.05□□□□□ -1.92
CHD9-210ENST00000564582 APLNQ9ULZ1 77 aa3.05□□□□□ -1.92
CHD9-210ENST00000564582 MUC3AQ02505 3323 aa3.05□□□□□ -1.92
CHD9-210ENST00000564582 FLNAP21333 2647 aaKnown RBP3.04□□□□□ -1.92
CHD9-210ENST00000564582 CENPEQ02224 2701 aa3.03□□□□□ -1.92
CHD9-210ENST00000564582 FLNCQ14315 2725 aa3.03□□□□□ -1.92
CHD9-210ENST00000564582 A0A087WTM6 91 aa3.02□□□□□ -1.93
CHD9-210ENST00000564582 P0C880 135 aa3.02□□□□□ -1.93
CHD9-210ENST00000564582 Q6ZRN7 208 aaPredicted RBP3.02□□□□□ -1.93
CHD9-210ENST00000564582 NIPBLQ6KC79 2804 aaeCLIP3.01□□□□□ -1.93
CHD9-210ENST00000564582 UBR5O95071 2799 aaPredicted RBP3□□□□□ -1.93
CHD9-210ENST00000564582 J3QKU1 62 aa3□□□□□ -1.93
CHD9-210ENST00000564582 HIVEP1P15822 2718 aa2.99□□□□□ -1.93
CHD9-210ENST00000564582 ZNF462Q96JM2 2506 aa2.98□□□□□ -1.93
CHD9-210ENST00000564582 HELZ2Q9BYK8 2649 aaKnown RBP2.98□□□□□ -1.93
CHD9-210ENST00000564582 DNAH1Q9P2D7 4330 aa2.97□□□□□ -1.93
CHD9-210ENST00000564582 ANK3Q12955 4377 aaKnown RBP2.97□□□□□ -1.93
CHD9-210ENST00000564582 ACANP16112 2415 aa2.97□□□□□ -1.93
CHD9-210ENST00000564582 IGSF10Q6WRI0 2623 aa2.96□□□□□ -1.94
CHD9-210ENST00000564582 TEP1Q99973 2627 aaKnown RBP2.94□□□□□ -1.94
CHD9-210ENST00000564582 BAHCC1Q9P281 2608 aa2.94□□□□□ -1.94
CHD9-210ENST00000564582 OTOGQ6ZRI0 2925 aa2.94□□□□□ -1.94
CHD9-210ENST00000564582 VWFP04275 2813 aa2.94□□□□□ -1.94
CHD9-210ENST00000564582 FASNP49327 2511 aaKnown RBP2.93□□□□□ -1.94
CHD9-210ENST00000564582 CSMD2Q7Z408 3487 aa2.93□□□□□ -1.94
CHD9-210ENST00000564582 LUZP6Q538Z0 58 aa2.93□□□□□ -1.94
CHD9-210ENST00000564582 SMR3AQ99954 134 aa2.93□□□□□ -1.94
CHD9-210ENST00000564582 KRTAP13-2Q52LG2 175 aa2.91□□□□□ -1.94
CHD9-210ENST00000564582 ATRQ13535 2644 aa2.91□□□□□ -1.94
CHD9-210ENST00000564582 HECTD1Q9ULT8 2610 aa2.9□□□□□ -1.94
CHD9-210ENST00000564582 TENM4Q6N022 2769 aa2.9□□□□□ -1.94
CHD9-210ENST00000564582 SRRM2Q9UQ35 2752 aaKnown RBP2.9□□□□□ -1.94
CHD9-210ENST00000564582 M0QZ58 72 aa2.9□□□□□ -1.95
CHD9-210ENST00000564582 CAMK2N1Q7Z7J9 78 aa2.89□□□□□ -1.95
CHD9-210ENST00000564582 TPRXLQ17RH7 258 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms