RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 AMELXQ99217 191 aa2.81□□□□□ -1.96
HERC1-213ENST00000561359 IGKV2-28A0A075B6P5 120 aa2.8□□□□□ -1.96
HERC1-213ENST00000561359 NDUFC1O43677 76 aa2.8□□□□□ -1.96
HERC1-213ENST00000561359 IGKV2D-28P01615 120 aa2.8□□□□□ -1.96
HERC1-213ENST00000561359 KRTAP10-5P60370 271 aa2.8□□□□□ -1.96
HERC1-213ENST00000561359 NKAPP1Q8N9T2 125 aa2.8□□□□□ -1.96
HERC1-213ENST00000561359 SCGB3A1Q96QR1 104 aa2.8□□□□□ -1.96
HERC1-213ENST00000561359 HIGD2AQ9BW72 106 aa2.8□□□□□ -1.96
HERC1-213ENST00000561359 TRBV6-5A0A0K0K1A5 114 aa2.79□□□□□ -1.96
HERC1-213ENST00000561359 H7BZZ5 65 aa2.79□□□□□ -1.96
HERC1-213ENST00000561359 LEPROTO15243 131 aa2.79□□□□□ -1.96
HERC1-213ENST00000561359 RPS29P62273 56 aaKnown RBP2.79□□□□□ -1.96
HERC1-213ENST00000561359 KLKP1Q107X0 134 aa2.79□□□□□ -1.96
HERC1-213ENST00000561359 Q1RN00 199 aa2.79□□□□□ -1.96
HERC1-213ENST00000561359 ATP5EP2Q5VTU8 51 aa2.79□□□□□ -1.96
HERC1-213ENST00000561359 SPRR4Q96PI1 79 aa2.79□□□□□ -1.96
HERC1-213ENST00000561359 SMIM2Q9BVW6 85 aa2.79□□□□□ -1.96
HERC1-213ENST00000561359 TRAV7A0A075B6U4 112 aa2.78□□□□□ -1.96
HERC1-213ENST00000561359 TRBV27A0A0K0K1C4 114 aa2.78□□□□□ -1.96
HERC1-213ENST00000561359 TRBV10-3A0A0K0K1G6 114 aa2.78□□□□□ -1.96
HERC1-213ENST00000561359 IGIPA6NJ69 53 aa2.78□□□□□ -1.96
HERC1-213ENST00000561359 MT2AP02795 61 aa2.78□□□□□ -1.96
HERC1-213ENST00000561359 LGALS3P17931 250 aaKnown RBP2.78□□□□□ -1.96
HERC1-213ENST00000561359 KRTAP10-10P60014 251 aa2.78□□□□□ -1.96
HERC1-213ENST00000561359 MUSTN1Q8IVN3 82 aa2.78□□□□□ -1.96
HERC1-213ENST00000561359 TMEM141Q96I45 108 aa2.78□□□□□ -1.96
HERC1-213ENST00000561359 TOMM7Q9P0U1 55 aa2.78□□□□□ -1.96
HERC1-213ENST00000561359 A0A0J9YXY3 114 aa2.77□□□□□ -1.97
HERC1-213ENST00000561359 TIMM17BO60830 172 aa2.77□□□□□ -1.97
HERC1-213ENST00000561359 PPP1R17O96001 155 aa2.77□□□□□ -1.97
HERC1-213ENST00000561359 CCKP06307 115 aa2.77□□□□□ -1.97
HERC1-213ENST00000561359 VPREB1P12018 145 aa2.77□□□□□ -1.97
HERC1-213ENST00000561359 POLR2KP53803 58 aaKnown RBP2.77□□□□□ -1.97
HERC1-213ENST00000561359 TSPEAR-AS2P59090 65 aa2.77□□□□□ -1.97
HERC1-213ENST00000561359 S100A7L2Q5SY68 101 aa2.77□□□□□ -1.97
HERC1-213ENST00000561359 ZNF706Q9Y5V0 76 aaPredicted RBP2.77□□□□□ -1.97
HERC1-213ENST00000561359 KMT2DO14686 5537 aa2.76□□□□□ -1.97
HERC1-213ENST00000561359 TRAV13-2A0A0B4J235 113 aa2.76□□□□□ -1.97
HERC1-213ENST00000561359 H7C2G1 150 aa2.76□□□□□ -1.97
HERC1-213ENST00000561359 MT1FP04733 61 aa2.76□□□□□ -1.97
HERC1-213ENST00000561359 MOBPQ13875 183 aa2.76□□□□□ -1.97
HERC1-213ENST00000561359 C2orf66Q6UXQ4 117 aa2.76□□□□□ -1.97
HERC1-213ENST00000561359 CLEC2BQ92478 149 aa2.76□□□□□ -1.97
HERC1-213ENST00000561359 OBSCN-AS1Q96MR7 158 aa2.76□□□□□ -1.97
HERC1-213ENST00000561359 TIMM17AQ99595 171 aa2.76□□□□□ -1.97
HERC1-213ENST00000561359 IGLV5-45A0A087WSX0 123 aa2.75□□□□□ -1.97
HERC1-213ENST00000561359 IGLV9-49A0A0B4J1Y8 123 aa2.75□□□□□ -1.97
HERC1-213ENST00000561359 IGLV6-57P01721 117 aa2.75□□□□□ -1.97
HERC1-213ENST00000561359 BAALC-AS2P0C853 105 aa2.75□□□□□ -1.97
HERC1-213ENST00000561359 RPL39P62891 51 aaKnown RBP2.75□□□□□ -1.97
HERC1-213ENST00000561359 C20orf197Q8N268 126 aa2.75□□□□□ -1.97
HERC1-213ENST00000561359 LITAFQ99732 161 aa2.75□□□□□ -1.97
HERC1-213ENST00000561359 IGKV3D-7A0A0C4DH55 119 aa2.74□□□□□ -1.97
HERC1-213ENST00000561359 SMIM1B2RUZ4 78 aa2.74□□□□□ -1.97
HERC1-213ENST00000561359 M0R378 163 aa2.74□□□□□ -1.97
HERC1-213ENST00000561359 ERC2-IT1O76042 136 aa2.74□□□□□ -1.97
HERC1-213ENST00000561359 DNAL4O96015 105 aa2.74□□□□□ -1.97
HERC1-213ENST00000561359 KRTAP10-12P60413 245 aa2.74□□□□□ -1.97
HERC1-213ENST00000561359 RBM3P98179 157 aaKnown RBP2.74□□□□□ -1.97
HERC1-213ENST00000561359 SSBP3-AS1Q7Z2R9 100 aa2.74□□□□□ -1.97
HERC1-213ENST00000561359 MDN1Q9NU22 5596 aa2.73□□□□□ -1.97
HERC1-213ENST00000561359 RPL37P61927 97 aaKnown RBP2.73□□□□□ -1.97
HERC1-213ENST00000561359 Q1T7F1 81 aa2.73□□□□□ -1.97
HERC1-213ENST00000561359 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
HERC1-213ENST00000561359 KTN1-AS1Q86SY8 53 aa2.73□□□□□ -1.97
HERC1-213ENST00000561359 Q8IZM0 81 aa2.73□□□□□ -1.97
HERC1-213ENST00000561359 FAM104AQ969W3 186 aa2.73□□□□□ -1.97
HERC1-213ENST00000561359 A0A087WVE0 104 aa2.72□□□□□ -1.97
HERC1-213ENST00000561359 F8WEM9 126 aa2.72□□□□□ -1.97
HERC1-213ENST00000561359 NDUFS5O43920 106 aa2.72□□□□□ -1.97
HERC1-213ENST00000561359 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
HERC1-213ENST00000561359 ADAMTSL4-AS1Q5T5F5 129 aa2.72□□□□□ -1.97
HERC1-213ENST00000561359 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
HERC1-213ENST00000561359 RBM12B-AS1Q9P1G2 102 aa2.72□□□□□ -1.97
HERC1-213ENST00000561359 TRAV23DV6A0A075B6W5 121 aa2.7□□□□□ -1.98
HERC1-213ENST00000561359 LINC00483Q53H64 154 aa2.7□□□□□ -1.98
HERC1-213ENST00000561359 TRBV7-4A0A0J9YYF1 115 aa2.69□□□□□ -1.98
HERC1-213ENST00000561359 H0YGX0 51 aa2.69□□□□□ -1.98
HERC1-213ENST00000561359 Q6ZVQ6 151 aa2.69□□□□□ -1.98
HERC1-213ENST00000561359 FAM19A3Q7Z5A8 133 aa2.69□□□□□ -1.98
HERC1-213ENST00000561359 LIMD2Q9BT23 127 aa2.69□□□□□ -1.98
HERC1-213ENST00000561359 IGLV4-3A0A075B6K6 122 aa2.68□□□□□ -1.98
HERC1-213ENST00000561359 JMJD7-PLA2G4BH0Y9G9 81 aa2.68□□□□□ -1.98
HERC1-213ENST00000561359 LINC00308Q8TCZ7 52 aa2.68□□□□□ -1.98
HERC1-213ENST00000561359 C14orf132Q9NPU4 83 aa2.68□□□□□ -1.98
HERC1-213ENST00000561359 UBL5Q9BZL1 73 aa2.67□□□□□ -1.98
HERC1-213ENST00000561359 CDKN2A-AS1Q9UH64 79 aa2.67□□□□□ -1.98
HERC1-213ENST00000561359 ETDCA0A1B0GVM5 59 aa2.66□□□□□ -1.98
HERC1-213ENST00000561359 hDV103S1A0JD37 113 aa2.66□□□□□ -1.98
HERC1-213ENST00000561359 C8orf87E5RJ46 101 aa2.66□□□□□ -1.98
HERC1-213ENST00000561359 CXCL6P80162 114 aa2.66□□□□□ -1.98
HERC1-213ENST00000561359 SOSTDC1Q6X4U4 206 aa2.66□□□□□ -1.98
HERC1-213ENST00000561359 ATP11AUNQ6ZP68 121 aa2.66□□□□□ -1.98
HERC1-213ENST00000561359 ZNF625Q96I27 306 aaPredicted RBP2.66□□□□□ -1.98
HERC1-213ENST00000561359 FAM218AQ96MZ4 157 aa2.66□□□□□ -1.98
HERC1-213ENST00000561359 C20orf166-AS1Q96NR2 134 aa2.66□□□□□ -1.98
HERC1-213ENST00000561359 SNURFQ9Y675 71 aa2.66□□□□□ -1.98
HERC1-213ENST00000561359 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.99
HERC1-213ENST00000561359 ZNF73O43830 326 aaPredicted RBP2.65□□□□□ -1.99
HERC1-213ENST00000561359 LCA10Q71F78 164 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms