RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 A6NN06 94 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 C5orf67F2Z3F1 127 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 K7EIM0 57 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 GNRH2O43555 120 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 APELAP0DMC3 54 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 CCL4P13236 92 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 LELP1Q5T871 98 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 Q5VV11 94 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 Q8NAQ8 132 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 DEFB108BQ8NET1 73 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 DIRC1Q969H9 104 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 PRR15LQ9BU68 103 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 RP1P56715 2156 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 ARFGEF3Q5TH69 2177 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 MUC5ACP98088 5654 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 TNCP24821 2201 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 LOC110117498A0A087WWA1 95 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 TRGV4A0A0C4DH28 118 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 SPTY2D1-AS1A0A0U1RR47 76 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 M0QY20 66 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 NDUFB1O75438 58 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 CCL3L1P16619 93 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 LINC00158P58513 81 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 DEFB133Q30KQ1 61 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 LINC01554Q52M75 96 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 C9orf116Q5BN46 136 aaPredicted RBP0.83□□□□□ -2.28
USP8-216ENST00000561206 FAM74A4Q5TZK3 123 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 CASC2Q6XLA1 102 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 Q8N814 137 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 FDCSPQ8NFU4 85 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 SMIM11BQ8TCY0 68 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 DEFB104AQ8WTQ1 72 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 GAFA1Q96PS6 74 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 CDC42SE1Q9NRR8 79 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 LRP2P98164 4655 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 MUC4Q99102 2169 aa0.83□□□□□ -2.28
USP8-216ENST00000561206 LRP1BQ9NZR2 4599 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 ABCA4P78363 2273 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 ARHGAP32A7KAX9 2087 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 FAT1Q14517 4588 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.82□□□□□ -2.28
USP8-216ENST00000561206 LOC101927531A0A1B0GV80 90 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 ETDCA0A1B0GVM5 59 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 TRBV6-4A0A1B0GX49 114 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 CLPSL1A2RUU4 121 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 C10orf142B7Z368 130 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 RNASE3P12724 160 aaKnown RBP0.82□□□□□ -2.28
USP8-216ENST00000561206 CCL18P55774 89 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 ELOF1P60002 83 aaKnown RBP0.82□□□□□ -2.28
USP8-216ENST00000561206 PRB3Q04118 309 aaPredicted RBP0.82□□□□□ -2.28
USP8-216ENST00000561206 DEFB114Q30KQ6 69 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 ASB16-AS1Q495Z4 193 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 Q6ZQT0 140 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 Q6ZTI0 123 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 COX7B2Q8TF08 81 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 LINC00208Q96KT6 92 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 RETNLBQ9BQ08 111 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 XAGE1AQ9HD64 81 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 TOMM7Q9P0U1 55 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 CDKN2A-AS1Q9UH64 79 aa0.82□□□□□ -2.28
USP8-216ENST00000561206 ANK3Q12955 4377 aaKnown RBP0.82□□□□□ -2.28
USP8-216ENST00000561206 PLECQ15149 4684 aaKnown RBP0.82□□□□□ -2.28
USP8-216ENST00000561206 PKD1P98161 4303 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 TRGV2A0A075B6R0 118 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 LCE6AA0A183 80 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 C19orf84I3L1E1 186 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 M0R2N4 97 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 NDUFA4O00483 81 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 COX7BP24311 80 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 COX6A2Q02221 97 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 SPAG11BQ08648 103 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.81□□□□□ -2.28
USP8-216ENST00000561206 DEFB124Q8NES8 71 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 Q9BRP9 147 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 LINC00467Q9BRT7 94 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 KRTAP2-1Q9BYU5 128 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 TTTY12Q9BZ98 90 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 WFDC10AQ9H1F0 79 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 CDC42SE2Q9NRR3 84 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 KLK9Q9UKQ9 250 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 MALRD1Q5VYJ5 2156 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 CADP27708 2225 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 MDN1Q9NU22 5596 aa0.81□□□□□ -2.28
USP8-216ENST00000561206 DNAH7Q8WXX0 4024 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 DNAJC13O75165 2243 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 ABCA1O95477 2261 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 HUWE1Q7Z6Z7 4374 aaKnown RBP0.8□□□□□ -2.28
USP8-216ENST00000561206 PKDREJQ9NTG1 2253 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 PLCE1Q9P212 2302 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 IGKV3-7A0A075B6H7 116 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 IGLV3-9A0A075B6K5 115 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 ODF3BA8MYP8 253 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 MSMBP08118 114 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 MINOS1Q5TGZ0 78 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 LINC00575Q6W349 94 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 COA5Q86WW8 74 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 DEFB119Q8N690 84 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 KAAG1Q9UBP8 84 aa0.8□□□□□ -2.28
USP8-216ENST00000561206 FAM215AQ9Y5M1 114 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms