RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 MT-ATP8P03928 68 aa9.51□□□□□ -0.89
TPM1-214ENST00000558544 LINC00643Q86TS7 51 aa9.51□□□□□ -0.89
TPM1-214ENST00000558544 UBL5Q9BZL1 73 aa9.51□□□□□ -0.89
TPM1-214ENST00000558544 RNF213Q63HN8 5207 aa9.51□□□□□ -0.89
TPM1-214ENST00000558544 NREPQ16612 68 aa9.46□□□□□ -0.9
TPM1-214ENST00000558544 IGKV3D-7A0A0C4DH55 119 aa9.45□□□□□ -0.9
TPM1-214ENST00000558544 DSCR10P59022 87 aa9.45□□□□□ -0.9
TPM1-214ENST00000558544 J3KT08 172 aa9.44□□□□□ -0.9
TPM1-214ENST00000558544 IGHV6-1A0A0B4J1U7 121 aa9.42□□□□□ -0.9
TPM1-214ENST00000558544 SEC61BP60468 96 aaKnown RBP9.42□□□□□ -0.9
TPM1-214ENST00000558544 ATP5EP2Q5VTU8 51 aa9.41□□□□□ -0.9
TPM1-214ENST00000558544 A0A1B0GVX0 72 aa9.4□□□□□ -0.9
TPM1-214ENST00000558544 RPL37P61927 97 aaKnown RBP9.4□□□□□ -0.9
TPM1-214ENST00000558544 LINC00313P59037 77 aa9.39□□□□□ -0.91
TPM1-214ENST00000558544 NOTCH2NLQ7Z3S9 236 aa9.38□□□□□ -0.91
TPM1-214ENST00000558544 MUC2Q02817 5179 aa9.38□□□□□ -0.91
TPM1-214ENST00000558544 CXCL6P80162 114 aa9.37□□□□□ -0.91
TPM1-214ENST00000558544 NDUFB1O75438 58 aa9.37□□□□□ -0.91
TPM1-214ENST00000558544 PCOTHQ58A44 107 aa9.37□□□□□ -0.91
TPM1-214ENST00000558544 A8MWP4 228 aa9.36□□□□□ -0.91
TPM1-214ENST00000558544 BPY2O14599 106 aa9.36□□□□□ -0.91
TPM1-214ENST00000558544 C8orf87E5RJ46 101 aa9.35□□□□□ -0.91
TPM1-214ENST00000558544 KRTAP16-1A8MUX0 517 aa9.34□□□□□ -0.91
TPM1-214ENST00000558544 Q75L30 129 aa9.34□□□□□ -0.91
TPM1-214ENST00000558544 C20orf166-AS1Q96NR2 134 aa9.33□□□□□ -0.92
TPM1-214ENST00000558544 IMUPQ9GZP8 106 aa9.33□□□□□ -0.92
TPM1-214ENST00000558544 Q8N9L7 120 aa9.32□□□□□ -0.92
TPM1-214ENST00000558544 A8MUU9 505 aa9.31□□□□□ -0.92
TPM1-214ENST00000558544 KRTAP4-1Q9BYQ7 146 aa9.3□□□□□ -0.92
TPM1-214ENST00000558544 A0A087WVE0 104 aa9.29□□□□□ -0.92
TPM1-214ENST00000558544 HIST1H4AP62805 103 aaKnown RBP9.29□□□□□ -0.92
TPM1-214ENST00000558544 PRR15Q8IV56 129 aa9.29□□□□□ -0.92
TPM1-214ENST00000558544 K7EQZ3 153 aa9.28□□□□□ -0.92
TPM1-214ENST00000558544 C8orf17Q9NRJ1 99 aa9.28□□□□□ -0.92
TPM1-214ENST00000558544 ATP11AUNQ6ZP68 121 aa9.26□□□□□ -0.93
TPM1-214ENST00000558544 MMP24-AS1A0A0U1RRL7 71 aa9.23□□□□□ -0.93
TPM1-214ENST00000558544 SCGB1A1P11684 91 aa9.22□□□□□ -0.93
TPM1-214ENST00000558544 FAM236AA0A1B0GUQ0 79 aa9.21□□□□□ -0.94
TPM1-214ENST00000558544 FAM236BA0A1B0GV22 79 aa9.21□□□□□ -0.94
TPM1-214ENST00000558544 TMEM254Q8TBM7 123 aa9.17□□□□□ -0.94
TPM1-214ENST00000558544 hDV103S1A0JD37 113 aa9.16□□□□□ -0.94
TPM1-214ENST00000558544 Q8N9P0 234 aaPredicted RBP9.16□□□□□ -0.94
TPM1-214ENST00000558544 MRPL34Q9BQ48 92 aaKnown RBP9.15□□□□□ -0.94
TPM1-214ENST00000558544 FAT4Q6V0I7 4981 aa9.14□□□□□ -0.95
TPM1-214ENST00000558544 A0A0U1RQV1 116 aa9.14□□□□□ -0.95
TPM1-214ENST00000558544 WFDC13Q8IUB5 93 aa9.14□□□□□ -0.95
TPM1-214ENST00000558544 HCG22E2RYF7 251 aa9.12□□□□□ -0.95
TPM1-214ENST00000558544 CASC2Q6XLA1 102 aa9.11□□□□□ -0.95
TPM1-214ENST00000558544 ZCCHC13Q8WW36 166 aaKnown RBP9.1□□□□□ -0.95
TPM1-214ENST00000558544 NDUFS5O43920 106 aa9.08□□□□□ -0.96
TPM1-214ENST00000558544 ATOX1O00244 68 aa9.06□□□□□ -0.96
TPM1-214ENST00000558544 ANAPC13Q9BS18 74 aa9.02□□□□□ -0.97
TPM1-214ENST00000558544 KRTAP19-2Q3LHN2 52 aa9□□□□□ -0.97
TPM1-214ENST00000558544 OCR1Q9BZK8 76 aa8.99□□□□□ -0.97
TPM1-214ENST00000558544 TRAV7A0A075B6U4 112 aa8.97□□□□□ -0.97
TPM1-214ENST00000558544 PCP4P48539 62 aa8.97□□□□□ -0.97
TPM1-214ENST00000558544 LCE2CQ5TA81 110 aa8.96□□□□□ -0.98
TPM1-214ENST00000558544 SERP2Q8N6R1 65 aa8.96□□□□□ -0.98
TPM1-214ENST00000558544 SMIM20Q8N5G0 67 aa8.95□□□□□ -0.98
TPM1-214ENST00000558544 Q5W150 140 aa8.94□□□□□ -0.98
TPM1-214ENST00000558544 SPINK7P58062 85 aa8.93□□□□□ -0.98
TPM1-214ENST00000558544 COX6B2Q6YFQ2 88 aa8.93□□□□□ -0.98
TPM1-214ENST00000558544 HRES1P13985 223 aa8.91□□□□□ -0.98
TPM1-214ENST00000558544 COX7CP15954 63 aa8.91□□□□□ -0.98
TPM1-214ENST00000558544 LCE2AQ5TA79 106 aaPredicted RBP8.91□□□□□ -0.98
TPM1-214ENST00000558544 CCDC179H3BU77 68 aa8.87□□□□□ -0.99
TPM1-214ENST00000558544 UQCRQO14949 82 aa8.86□□□□□ -0.99
TPM1-214ENST00000558544 TP53AIP1Q9HCN2 124 aa8.86□□□□□ -0.99
TPM1-214ENST00000558544 FLGP20930 4061 aaPredicted RBP8.86□□□□□ -0.99
TPM1-214ENST00000558544 IGKV2D-30A0A075B6S6 120 aa8.85□□□□□ -0.99
TPM1-214ENST00000558544 IGKV2-30P06310 120 aa8.85□□□□□ -0.99
TPM1-214ENST00000558544 MPLKIPQ8TAP9 179 aa8.85□□□□□ -0.99
TPM1-214ENST00000558544 RBM12B-AS1Q9P1G2 102 aa8.84□□□□□ -0.99
TPM1-214ENST00000558544 MT1HP80294 61 aa8.83□□□□□ -1
TPM1-214ENST00000558544 FAM236DA0A1B0GTK5 79 aa8.82□□□□□ -1
TPM1-214ENST00000558544 FAM236CP0DP71 79 aa8.82□□□□□ -1
TPM1-214ENST00000558544 C7orf65Q6ZTY9 151 aa8.82□□□□□ -1
TPM1-214ENST00000558544 H0Y9P7 68 aa8.79□□□□□ -1
TPM1-214ENST00000558544 C5orf47Q569G3 176 aa8.79□□□□□ -1
TPM1-214ENST00000558544 C20orf197Q8N268 126 aa8.79□□□□□ -1
TPM1-214ENST00000558544 TRAV22A0A0B4J277 110 aa8.78□□□□□ -1
TPM1-214ENST00000558544 CYSTM1Q9H1C7 97 aa8.75□□□□□ -1.01
TPM1-214ENST00000558544 SNURFQ9Y675 71 aa8.74□□□□□ -1.01
TPM1-214ENST00000558544 MP68P56378 58 aa8.73□□□□□ -1.01
TPM1-214ENST00000558544 KLKP1Q107X0 134 aa8.73□□□□□ -1.01
TPM1-214ENST00000558544 M0R2T5 61 aa8.71□□□□□ -1.02
TPM1-214ENST00000558544 LINC00208Q96KT6 92 aa8.71□□□□□ -1.02
TPM1-214ENST00000558544 H3BPC8 53 aa8.7□□□□□ -1.02
TPM1-214ENST00000558544 C1orf64Q8NEQ6 169 aa8.68□□□□□ -1.02
TPM1-214ENST00000558544 C4orf26Q17RF5 130 aa8.64□□□□□ -1.03
TPM1-214ENST00000558544 LOC101927531A0A1B0GV80 90 aa8.63□□□□□ -1.03
TPM1-214ENST00000558544 CYP4F30PQ9H0H9 118 aa8.62□□□□□ -1.03
TPM1-214ENST00000558544 H7BZZ5 65 aa8.61□□□□□ -1.03
TPM1-214ENST00000558544 KRTAP10-6P60371 365 aaPredicted RBP8.6□□□□□ -1.03
TPM1-214ENST00000558544 NDUFC1O43677 76 aa8.58□□□□□ -1.04
TPM1-214ENST00000558544 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
TPM1-214ENST00000558544 H1FX-AS1Q4G0G2 97 aa8.57□□□□□ -1.04
TPM1-214ENST00000558544 KRTAP3-1Q9BYR8 98 aa8.51□□□□□ -1.05
TPM1-214ENST00000558544 TMEM258P61165 79 aa8.5□□□□□ -1.05
TPM1-214ENST00000558544 SPANXA2-OT1Q8N9U9 137 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms