RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 MT1FP04733 61 aa4.3□□□□□ -1.72
VRK1-206ENST00000557222 DSCR10P59022 87 aa4.3□□□□□ -1.72
VRK1-206ENST00000557222 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
VRK1-206ENST00000557222 HIST1H4GQ99525 98 aa4.3□□□□□ -1.72
VRK1-206ENST00000557222 H3BMG7 143 aa4.29□□□□□ -1.72
VRK1-206ENST00000557222 HRES1P13985 223 aa4.29□□□□□ -1.72
VRK1-206ENST00000557222 DLEU1O43261 78 aa4.27□□□□□ -1.73
VRK1-206ENST00000557222 MTURNQ8N3F0 131 aa4.27□□□□□ -1.73
VRK1-206ENST00000557222 SIGMAR1Q99720 223 aa4.27□□□□□ -1.73
VRK1-206ENST00000557222 A0A0B4J2C4 111 aa4.26□□□□□ -1.73
VRK1-206ENST00000557222 TRBV7-4A0A0J9YYF1 115 aa4.26□□□□□ -1.73
VRK1-206ENST00000557222 A0A1W2PNM2 257 aa4.26□□□□□ -1.73
VRK1-206ENST00000557222 H3BQ85 93 aa4.26□□□□□ -1.73
VRK1-206ENST00000557222 S100A2P29034 98 aa4.26□□□□□ -1.73
VRK1-206ENST00000557222 KRTAP10-5P60370 271 aa4.26□□□□□ -1.73
VRK1-206ENST00000557222 NOTCH2NLQ7Z3S9 236 aa4.26□□□□□ -1.73
VRK1-206ENST00000557222 HIST3H2BBQ8N257 126 aa4.26□□□□□ -1.73
VRK1-206ENST00000557222 RAB37Q96AX2 223 aa4.26□□□□□ -1.73
VRK1-206ENST00000557222 HIST1H2BLQ99880 126 aa4.26□□□□□ -1.73
VRK1-206ENST00000557222 IGKV4-1P06312 121 aa4.25□□□□□ -1.73
VRK1-206ENST00000557222 COX8AP10176 69 aa4.25□□□□□ -1.73
VRK1-206ENST00000557222 FAM218AQ96MZ4 157 aa4.25□□□□□ -1.73
VRK1-206ENST00000557222 FABP2P12104 132 aa4.24□□□□□ -1.73
VRK1-206ENST00000557222 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
VRK1-206ENST00000557222 ANKRD29Q8N6D5 301 aa4.23□□□□□ -1.73
VRK1-206ENST00000557222 LINC00472Q9H8W2 130 aa4.23□□□□□ -1.73
VRK1-206ENST00000557222 HIGD1BQ9P298 99 aa4.23□□□□□ -1.73
VRK1-206ENST00000557222 C8orf87E5RJ46 101 aa4.21□□□□□ -1.74
VRK1-206ENST00000557222 A8MWP4 228 aa4.2□□□□□ -1.74
VRK1-206ENST00000557222 PRO1854Q9UHT4 67 aa4.2□□□□□ -1.74
VRK1-206ENST00000557222 IGHV6-1A0A0B4J1U7 121 aa4.19□□□□□ -1.74
VRK1-206ENST00000557222 TMEM256-PLSCR3K7ERE1 68 aa4.19□□□□□ -1.74
VRK1-206ENST00000557222 S100A6P06703 90 aa4.19□□□□□ -1.74
VRK1-206ENST00000557222 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
VRK1-206ENST00000557222 ORMDL1Q9P0S3 153 aa4.19□□□□□ -1.74
VRK1-206ENST00000557222 A0A1B0GVX0 72 aa4.18□□□□□ -1.74
VRK1-206ENST00000557222 DNAL4O96015 105 aa4.18□□□□□ -1.74
VRK1-206ENST00000557222 TRACP01848 142 aa4.18□□□□□ -1.74
VRK1-206ENST00000557222 ZCCHC13Q8WW36 166 aaKnown RBP4.18□□□□□ -1.74
VRK1-206ENST00000557222 CCKP06307 115 aa4.17□□□□□ -1.74
VRK1-206ENST00000557222 SPINK7P58062 85 aa4.17□□□□□ -1.74
VRK1-206ENST00000557222 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
VRK1-206ENST00000557222 DEFB116Q30KQ4 102 aa4.17□□□□□ -1.74
VRK1-206ENST00000557222 CEND1Q8N111 149 aa4.17□□□□□ -1.74
VRK1-206ENST00000557222 C14orf144Q96I85 54 aa4.17□□□□□ -1.74
VRK1-206ENST00000557222 J3KT08 172 aa4.16□□□□□ -1.74
VRK1-206ENST00000557222 UBE2V1Q13404 147 aa4.16□□□□□ -1.74
VRK1-206ENST00000557222 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
VRK1-206ENST00000557222 C2orf91Q6ZV80 131 aa4.15□□□□□ -1.75
VRK1-206ENST00000557222 COX6CP09669 75 aa4.14□□□□□ -1.75
VRK1-206ENST00000557222 SPATA45Q537H7 98 aa4.13□□□□□ -1.75
VRK1-206ENST00000557222 FXYD2P54710 66 aa4.12□□□□□ -1.75
VRK1-206ENST00000557222 A0A1B0GV72 72 aa4.11□□□□□ -1.75
VRK1-206ENST00000557222 NDUFB1O75438 58 aa4.11□□□□□ -1.75
VRK1-206ENST00000557222 S100A1P23297 94 aa4.11□□□□□ -1.75
VRK1-206ENST00000557222 PSMB2P49721 201 aa4.11□□□□□ -1.75
VRK1-206ENST00000557222 RBM3P98179 157 aaKnown RBP4.11□□□□□ -1.75
VRK1-206ENST00000557222 DSCR8Q96T75 97 aa4.11□□□□□ -1.75
VRK1-206ENST00000557222 VAMP8Q9BV40 100 aa4.11□□□□□ -1.75
VRK1-206ENST00000557222 NEBP20929 6669 aa4.11□□□□□ -1.75
VRK1-206ENST00000557222 WFDC13Q8IUB5 93 aa4.1□□□□□ -1.75
VRK1-206ENST00000557222 VPS25Q9BRG1 176 aa4.09□□□□□ -1.75
VRK1-206ENST00000557222 A0A1B0GW54 56 aa4.08□□□□□ -1.76
VRK1-206ENST00000557222 Q6ZQT0 140 aa4.08□□□□□ -1.76
VRK1-206ENST00000557222 C9JAW5 83 aa4.07□□□□□ -1.76
VRK1-206ENST00000557222 HSD52Q0P140 79 aa4.07□□□□□ -1.76
VRK1-206ENST00000557222 LYRM7Q5U5X0 104 aa4.07□□□□□ -1.76
VRK1-206ENST00000557222 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
VRK1-206ENST00000557222 H1FX-AS1Q4G0G2 97 aa4.06□□□□□ -1.76
VRK1-206ENST00000557222 C8orf17Q9NRJ1 99 aa4.06□□□□□ -1.76
VRK1-206ENST00000557222 IGKV3D-7A0A0C4DH55 119 aa4.05□□□□□ -1.76
VRK1-206ENST00000557222 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
VRK1-206ENST00000557222 K7ERJ3 54 aa4.04□□□□□ -1.76
VRK1-206ENST00000557222 Q6ZVQ6 151 aa4.04□□□□□ -1.76
VRK1-206ENST00000557222 BAALC-AS2P0C853 105 aa4.03□□□□□ -1.76
VRK1-206ENST00000557222 SCGB1C2P0DMR2 95 aa4.03□□□□□ -1.76
VRK1-206ENST00000557222 PDE6GP18545 87 aa4.03□□□□□ -1.76
VRK1-206ENST00000557222 JMJD7-PLA2G4BH0Y9G9 81 aa4.02□□□□□ -1.77
VRK1-206ENST00000557222 LOC110117498A0A087WWA1 95 aa4.01□□□□□ -1.77
VRK1-206ENST00000557222 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
VRK1-206ENST00000557222 PRR15Q8IV56 129 aa4.01□□□□□ -1.77
VRK1-206ENST00000557222 TMEM254Q8TBM7 123 aa4.01□□□□□ -1.77
VRK1-206ENST00000557222 MRPL34Q9BQ48 92 aaKnown RBP4□□□□□ -1.77
VRK1-206ENST00000557222 MMP24-AS1A0A0U1RRL7 71 aa3.97□□□□□ -1.77
VRK1-206ENST00000557222 NREPQ16612 68 aa3.97□□□□□ -1.77
VRK1-206ENST00000557222 UQCR10Q9UDW1 63 aa3.97□□□□□ -1.77
VRK1-206ENST00000557222 hDV103S1A0JD37 113 aa3.96□□□□□ -1.78
VRK1-206ENST00000557222 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
VRK1-206ENST00000557222 A6NN06 94 aa3.95□□□□□ -1.78
VRK1-206ENST00000557222 ATXN8Q156A1 80 aa3.95□□□□□ -1.78
VRK1-206ENST00000557222 PYY3Q5JQD4 70 aa3.95□□□□□ -1.78
VRK1-206ENST00000557222 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
VRK1-206ENST00000557222 C7orf65Q6ZTY9 151 aa3.95□□□□□ -1.78
VRK1-206ENST00000557222 NDUFS5O43920 106 aa3.93□□□□□ -1.78
VRK1-206ENST00000557222 KRTAP19-8Q3LI54 63 aa3.92□□□□□ -1.78
VRK1-206ENST00000557222 Q5VV11 94 aa3.92□□□□□ -1.78
VRK1-206ENST00000557222 C14orf132Q9NPU4 83 aa3.92□□□□□ -1.78
VRK1-206ENST00000557222 KMT2DO14686 5537 aa3.92□□□□□ -1.78
VRK1-206ENST00000557222 MT1BP07438 61 aa3.91□□□□□ -1.78
VRK1-206ENST00000557222 KRTAP20-1Q3LI63 56 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms