RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 JMJD7-PLA2G4BH0Y9G9 81 aa5.26□□□□□ -1.57
SRP54-210ENST00000556380 RBM3P98179 157 aaKnown RBP5.26□□□□□ -1.57
SRP54-210ENST00000556380 COL5A1-AS1Q5SY13 56 aa5.26□□□□□ -1.57
SRP54-210ENST00000556380 DSCR8Q96T75 97 aa5.25□□□□□ -1.57
SRP54-210ENST00000556380 A0A087WSZ3 146 aa5.24□□□□□ -1.57
SRP54-210ENST00000556380 A0A1B0GV72 72 aa5.24□□□□□ -1.57
SRP54-210ENST00000556380 A0A1B0GW54 56 aa5.24□□□□□ -1.57
SRP54-210ENST00000556380 C9orf92A6NGG3 77 aa5.24□□□□□ -1.57
SRP54-210ENST00000556380 PDE6GP18545 87 aa5.24□□□□□ -1.57
SRP54-210ENST00000556380 FAT4Q6V0I7 4981 aa5.24□□□□□ -1.57
SRP54-210ENST00000556380 H3BT86 120 aa5.23□□□□□ -1.57
SRP54-210ENST00000556380 Q96NJ1 140 aa5.23□□□□□ -1.57
SRP54-210ENST00000556380 C9JAW5 83 aa5.22□□□□□ -1.57
SRP54-210ENST00000556380 CCKP06307 115 aa5.22□□□□□ -1.57
SRP54-210ENST00000556380 SEC61BP60468 96 aaKnown RBP5.22□□□□□ -1.57
SRP54-210ENST00000556380 KRTAP4-1Q9BYQ7 146 aa5.22□□□□□ -1.57
SRP54-210ENST00000556380 LOC110117498A0A087WWA1 95 aa5.2□□□□□ -1.58
SRP54-210ENST00000556380 OBSCN-AS1Q96MR7 158 aa5.2□□□□□ -1.58
SRP54-210ENST00000556380 SPCS1Q9Y6A9 102 aa5.2□□□□□ -1.58
SRP54-210ENST00000556380 LINC00472Q9H8W2 130 aa5.19□□□□□ -1.58
SRP54-210ENST00000556380 RPL37P61927 97 aaKnown RBP5.17□□□□□ -1.58
SRP54-210ENST00000556380 PCOTHQ58A44 107 aa5.17□□□□□ -1.58
SRP54-210ENST00000556380 Q6ZQT0 140 aa5.17□□□□□ -1.58
SRP54-210ENST00000556380 PCP4L1A6NKN8 68 aa5.16□□□□□ -1.58
SRP54-210ENST00000556380 K7EP34 96 aa5.15□□□□□ -1.59
SRP54-210ENST00000556380 VPS25Q9BRG1 176 aa5.15□□□□□ -1.59
SRP54-210ENST00000556380 J3KT08 172 aa5.14□□□□□ -1.59
SRP54-210ENST00000556380 GTF2H5Q6ZYL4 71 aa5.14□□□□□ -1.59
SRP54-210ENST00000556380 A0A0U1RQV1 116 aa5.13□□□□□ -1.59
SRP54-210ENST00000556380 IGKV4-1P06312 121 aa5.13□□□□□ -1.59
SRP54-210ENST00000556380 DEFB116Q30KQ4 102 aa5.13□□□□□ -1.59
SRP54-210ENST00000556380 Q75L30 129 aa5.13□□□□□ -1.59
SRP54-210ENST00000556380 C14orf132Q9NPU4 83 aa5.13□□□□□ -1.59
SRP54-210ENST00000556380 MTURNQ8N3F0 131 aa5.12□□□□□ -1.59
SRP54-210ENST00000556380 A8MUU9 505 aa5.11□□□□□ -1.59
SRP54-210ENST00000556380 DSCR10P59022 87 aa5.11□□□□□ -1.59
SRP54-210ENST00000556380 NOTCH2NLQ7Z3S9 236 aa5.11□□□□□ -1.59
SRP54-210ENST00000556380 C20orf166-AS1Q96NR2 134 aa5.11□□□□□ -1.59
SRP54-210ENST00000556380 SIGMAR1Q99720 223 aa5.11□□□□□ -1.59
SRP54-210ENST00000556380 KRTAP16-1A8MUX0 517 aa5.1□□□□□ -1.59
SRP54-210ENST00000556380 F8W1H4 67 aa5.1□□□□□ -1.59
SRP54-210ENST00000556380 PRO0461Q9UI25 63 aa5.1□□□□□ -1.59
SRP54-210ENST00000556380 LINC00313P59037 77 aa5.09□□□□□ -1.59
SRP54-210ENST00000556380 KRTAP19-2Q3LHN2 52 aa5.09□□□□□ -1.59
SRP54-210ENST00000556380 C8orf87E5RJ46 101 aa5.08□□□□□ -1.6
SRP54-210ENST00000556380 FLGP20930 4061 aaPredicted RBP5.07□□□□□ -1.6
SRP54-210ENST00000556380 A0A1B0GVX0 72 aa5.07□□□□□ -1.6
SRP54-210ENST00000556380 NDUFB1O75438 58 aa5.07□□□□□ -1.6
SRP54-210ENST00000556380 NREPQ16612 68 aa5.07□□□□□ -1.6
SRP54-210ENST00000556380 ATP11AUNQ6ZP68 121 aa5.06□□□□□ -1.6
SRP54-210ENST00000556380 IGHV6-1A0A0B4J1U7 121 aa5.05□□□□□ -1.6
SRP54-210ENST00000556380 A8MWP4 228 aa5.04□□□□□ -1.6
SRP54-210ENST00000556380 IGKV3D-7A0A0C4DH55 119 aa5.03□□□□□ -1.6
SRP54-210ENST00000556380 PRR15Q8IV56 129 aa5□□□□□ -1.61
SRP54-210ENST00000556380 UBL5Q9BZL1 73 aa5□□□□□ -1.61
SRP54-210ENST00000556380 BPY2O14599 106 aa4.99□□□□□ -1.61
SRP54-210ENST00000556380 ETDBQ3ZM63 59 aa4.99□□□□□ -1.61
SRP54-210ENST00000556380 Q6ZVQ6 151 aa4.99□□□□□ -1.61
SRP54-210ENST00000556380 C8orf17Q9NRJ1 99 aa4.99□□□□□ -1.61
SRP54-210ENST00000556380 Q8N9P0 234 aaPredicted RBP4.98□□□□□ -1.61
SRP54-210ENST00000556380 ACYP1P07311 99 aa4.96□□□□□ -1.62
SRP54-210ENST00000556380 MT1HP80294 61 aa4.96□□□□□ -1.62
SRP54-210ENST00000556380 LCE1AQ5T7P2 110 aa4.96□□□□□ -1.62
SRP54-210ENST00000556380 LINC00846Q9NV44 126 aa4.96□□□□□ -1.62
SRP54-210ENST00000556380 MMP24-AS1A0A0U1RRL7 71 aa4.95□□□□□ -1.62
SRP54-210ENST00000556380 TMEM254Q8TBM7 123 aa4.95□□□□□ -1.62
SRP54-210ENST00000556380 FAM240AA0A1B0GVK7 77 aa4.94□□□□□ -1.62
SRP54-210ENST00000556380 K7EQZ3 153 aa4.94□□□□□ -1.62
SRP54-210ENST00000556380 ZCCHC13Q8WW36 166 aaKnown RBP4.93□□□□□ -1.62
SRP54-210ENST00000556380 hDV103S1A0JD37 113 aa4.92□□□□□ -1.62
SRP54-210ENST00000556380 CXCL6P80162 114 aa4.92□□□□□ -1.62
SRP54-210ENST00000556380 MPLKIPQ8TAP9 179 aa4.92□□□□□ -1.62
SRP54-210ENST00000556380 MRPL34Q9BQ48 92 aaKnown RBP4.92□□□□□ -1.62
SRP54-210ENST00000556380 Q8N9L7 120 aa4.91□□□□□ -1.62
SRP54-210ENST00000556380 A0A1B0GV90 55 aa4.9□□□□□ -1.63
SRP54-210ENST00000556380 HRES1P13985 223 aa4.9□□□□□ -1.63
SRP54-210ENST00000556380 COX6B2Q6YFQ2 88 aa4.9□□□□□ -1.63
SRP54-210ENST00000556380 ATP5EP2Q5VTU8 51 aa4.88□□□□□ -1.63
SRP54-210ENST00000556380 SPINK7P58062 85 aa4.87□□□□□ -1.63
SRP54-210ENST00000556380 CASC2Q6XLA1 102 aa4.87□□□□□ -1.63
SRP54-210ENST00000556380 HCG22E2RYF7 251 aa4.86□□□□□ -1.63
SRP54-210ENST00000556380 J3QR89 54 aa4.85□□□□□ -1.63
SRP54-210ENST00000556380 KRTAP10-6P60371 365 aaPredicted RBP4.85□□□□□ -1.63
SRP54-210ENST00000556380 WFDC13Q8IUB5 93 aa4.85□□□□□ -1.63
SRP54-210ENST00000556380 NDUFS5O43920 106 aa4.84□□□□□ -1.63
SRP54-210ENST00000556380 Q5W150 140 aa4.84□□□□□ -1.63
SRP54-210ENST00000556380 RBM12B-AS1Q9P1G2 102 aa4.83□□□□□ -1.64
SRP54-210ENST00000556380 TP53AIP1Q9HCN2 124 aa4.82□□□□□ -1.64
SRP54-210ENST00000556380 M0R2T5 61 aa4.81□□□□□ -1.64
SRP54-210ENST00000556380 IGKV2-30P06310 120 aa4.81□□□□□ -1.64
SRP54-210ENST00000556380 LINC00643Q86TS7 51 aa4.81□□□□□ -1.64
SRP54-210ENST00000556380 FAM236DA0A1B0GTK5 79 aa4.78□□□□□ -1.64
SRP54-210ENST00000556380 FAM236CP0DP71 79 aa4.78□□□□□ -1.64
SRP54-210ENST00000556380 C7orf65Q6ZTY9 151 aa4.76□□□□□ -1.65
SRP54-210ENST00000556380 HIST1H4AP62805 103 aaKnown RBP4.74□□□□□ -1.65
SRP54-210ENST00000556380 IGKV2D-30A0A075B6S6 120 aa4.73□□□□□ -1.65
SRP54-210ENST00000556380 K7ERU9 68 aa4.72□□□□□ -1.65
SRP54-210ENST00000556380 UQCRQO14949 82 aa4.69□□□□□ -1.66
SRP54-210ENST00000556380 TRAV22A0A0B4J277 110 aa4.68□□□□□ -1.66
SRP54-210ENST00000556380 ATOX1O00244 68 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms