RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 F8W1H4 67 aa9.27□□□□□ -0.93
NPC2-208ENST00000556009 C14orf132Q9NPU4 83 aa9.27□□□□□ -0.93
NPC2-208ENST00000556009 LOC110117498A0A087WWA1 95 aa9.26□□□□□ -0.93
NPC2-208ENST00000556009 Q6ZQT0 140 aa9.25□□□□□ -0.93
NPC2-208ENST00000556009 Q75L30 129 aa9.25□□□□□ -0.93
NPC2-208ENST00000556009 VPS25Q9BRG1 176 aa9.25□□□□□ -0.93
NPC2-208ENST00000556009 PDE6GP18545 87 aa9.24□□□□□ -0.93
NPC2-208ENST00000556009 ATP11AUNQ6ZP68 121 aa9.24□□□□□ -0.93
NPC2-208ENST00000556009 A0A087WSZ3 146 aa9.23□□□□□ -0.93
NPC2-208ENST00000556009 SS18L2Q9UHA2 77 aa9.2□□□□□ -0.94
NPC2-208ENST00000556009 C21orf62-AS1Q17RA5 79 aa9.17□□□□□ -0.94
NPC2-208ENST00000556009 ETDBQ3ZM63 59 aa9.17□□□□□ -0.94
NPC2-208ENST00000556009 A0A1B0GW54 56 aa9.14□□□□□ -0.95
NPC2-208ENST00000556009 Q96NJ1 140 aa9.13□□□□□ -0.95
NPC2-208ENST00000556009 C20orf166-AS1Q96NR2 134 aa9.11□□□□□ -0.95
NPC2-208ENST00000556009 A8MUU9 505 aa9.08□□□□□ -0.96
NPC2-208ENST00000556009 LINC00472Q9H8W2 130 aa9.07□□□□□ -0.96
NPC2-208ENST00000556009 USH2AO75445 5202 aa9.06□□□□□ -0.96
NPC2-208ENST00000556009 DEFB116Q30KQ4 102 aa9.05□□□□□ -0.96
NPC2-208ENST00000556009 KRTAP9-8Q9BYQ0 159 aa9.05□□□□□ -0.96
NPC2-208ENST00000556009 SSPOA2VEC9 5147 aa9.05□□□□□ -0.96
NPC2-208ENST00000556009 IGKV4-1P06312 121 aa9.04□□□□□ -0.96
NPC2-208ENST00000556009 NREPQ16612 68 aa9.04□□□□□ -0.96
NPC2-208ENST00000556009 SIGMAR1Q99720 223 aa9.03□□□□□ -0.96
NPC2-208ENST00000556009 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.99□□□□□ -0.97
NPC2-208ENST00000556009 LINC00846Q9NV44 126 aa8.99□□□□□ -0.97
NPC2-208ENST00000556009 J3KT08 172 aa8.98□□□□□ -0.97
NPC2-208ENST00000556009 Q6ZVQ6 151 aa8.97□□□□□ -0.97
NPC2-208ENST00000556009 KRTAP9-7A8MTY7 169 aa8.95□□□□□ -0.98
NPC2-208ENST00000556009 UBL5Q9BZL1 73 aa8.95□□□□□ -0.98
NPC2-208ENST00000556009 DSCR10P59022 87 aa8.94□□□□□ -0.98
NPC2-208ENST00000556009 KRTAP16-1A8MUX0 517 aa8.92□□□□□ -0.98
NPC2-208ENST00000556009 ACYP1P07311 99 aa8.92□□□□□ -0.98
NPC2-208ENST00000556009 IGHV6-1A0A0B4J1U7 121 aa8.91□□□□□ -0.98
NPC2-208ENST00000556009 FAM240AA0A1B0GVK7 77 aa8.91□□□□□ -0.98
NPC2-208ENST00000556009 A0A1B0GVX0 72 aa8.91□□□□□ -0.98
NPC2-208ENST00000556009 A8MWP4 228 aa8.91□□□□□ -0.98
NPC2-208ENST00000556009 BPY2O14599 106 aa8.91□□□□□ -0.98
NPC2-208ENST00000556009 LINC00313P59037 77 aa8.91□□□□□ -0.98
NPC2-208ENST00000556009 NDUFB1O75438 58 aa8.9□□□□□ -0.98
NPC2-208ENST00000556009 IGKV3D-7A0A0C4DH55 119 aa8.88□□□□□ -0.99
NPC2-208ENST00000556009 MT2AP02795 61 aa8.87□□□□□ -0.99
NPC2-208ENST00000556009 NOTCH2NLQ7Z3S9 236 aa8.87□□□□□ -0.99
NPC2-208ENST00000556009 MPLKIPQ8TAP9 179 aa8.87□□□□□ -0.99
NPC2-208ENST00000556009 FCGBPQ9Y6R7 5405 aaPredicted RBP8.85□□□□□ -0.99
NPC2-208ENST00000556009 C8orf87E5RJ46 101 aa8.85□□□□□ -0.99
NPC2-208ENST00000556009 J3QR89 54 aa8.85□□□□□ -0.99
NPC2-208ENST00000556009 PRR15Q8IV56 129 aa8.85□□□□□ -0.99
NPC2-208ENST00000556009 FAM236DA0A1B0GTK5 79 aa8.84□□□□□ -0.99
NPC2-208ENST00000556009 FAM236CP0DP71 79 aa8.84□□□□□ -0.99
NPC2-208ENST00000556009 K7EQZ3 153 aa8.83□□□□□ -1
NPC2-208ENST00000556009 HRES1P13985 223 aa8.83□□□□□ -1
NPC2-208ENST00000556009 RBM12B-AS1Q9P1G2 102 aa8.83□□□□□ -1
NPC2-208ENST00000556009 Q8N9L7 120 aa8.81□□□□□ -1
NPC2-208ENST00000556009 C8orf17Q9NRJ1 99 aa8.81□□□□□ -1
NPC2-208ENST00000556009 MT1FP04733 61 aa8.8□□□□□ -1
NPC2-208ENST00000556009 LCE2BO14633 110 aa8.79□□□□□ -1
NPC2-208ENST00000556009 CXCL6P80162 114 aa8.79□□□□□ -1
NPC2-208ENST00000556009 KRTAP9-3Q9BYQ3 159 aa8.77□□□□□ -1.01
NPC2-208ENST00000556009 MMP24-AS1A0A0U1RRL7 71 aa8.76□□□□□ -1.01
NPC2-208ENST00000556009 KRTAP19-1Q8IUB9 90 aa8.75□□□□□ -1.01
NPC2-208ENST00000556009 KRTAP10-10P60014 251 aa8.74□□□□□ -1.01
NPC2-208ENST00000556009 LINC00643Q86TS7 51 aa8.74□□□□□ -1.01
NPC2-208ENST00000556009 K7ERU9 68 aa8.73□□□□□ -1.01
NPC2-208ENST00000556009 ATP5EP2Q5VTU8 51 aa8.73□□□□□ -1.01
NPC2-208ENST00000556009 MACF1Q9UPN3 7388 aaKnown RBP8.73□□□□□ -1.01
NPC2-208ENST00000556009 hDV103S1A0JD37 113 aa8.71□□□□□ -1.02
NPC2-208ENST00000556009 TMEM254Q8TBM7 123 aa8.7□□□□□ -1.02
NPC2-208ENST00000556009 CASC2Q6XLA1 102 aa8.68□□□□□ -1.02
NPC2-208ENST00000556009 WFDC13Q8IUB5 93 aa8.68□□□□□ -1.02
NPC2-208ENST00000556009 Q8N9P0 234 aaPredicted RBP8.68□□□□□ -1.02
NPC2-208ENST00000556009 MRPL34Q9BQ48 92 aaKnown RBP8.68□□□□□ -1.02
NPC2-208ENST00000556009 SYNE2Q8WXH0 6885 aaKnown RBP8.68□□□□□ -1.02
NPC2-208ENST00000556009 HCG22E2RYF7 251 aa8.67□□□□□ -1.02
NPC2-208ENST00000556009 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
NPC2-208ENST00000556009 KRTAP3-2Q9BYR7 98 aa8.67□□□□□ -1.02
NPC2-208ENST00000556009 ZCCHC13Q8WW36 166 aaKnown RBP8.65□□□□□ -1.02
NPC2-208ENST00000556009 HIST1H4AP62805 103 aaKnown RBP8.64□□□□□ -1.03
NPC2-208ENST00000556009 SPINK7P58062 85 aa8.63□□□□□ -1.03
NPC2-208ENST00000556009 NDUFS5O43920 106 aa8.61□□□□□ -1.03
NPC2-208ENST00000556009 A0A087WVE0 104 aa8.57□□□□□ -1.04
NPC2-208ENST00000556009 MT-ATP8P03928 68 aa8.53□□□□□ -1.04
NPC2-208ENST00000556009 KRTAP19-6Q3LI70 58 aa8.53□□□□□ -1.04
NPC2-208ENST00000556009 Q5W150 140 aa8.48□□□□□ -1.05
NPC2-208ENST00000556009 IMUPQ9GZP8 106 aa8.48□□□□□ -1.05
NPC2-208ENST00000556009 TP53AIP1Q9HCN2 124 aa8.47□□□□□ -1.05
NPC2-208ENST00000556009 UQCRQO14949 82 aa8.37□□□□□ -1.07
NPC2-208ENST00000556009 IGKV2D-30A0A075B6S6 120 aa8.36□□□□□ -1.07
NPC2-208ENST00000556009 IGKV2-30P06310 120 aa8.36□□□□□ -1.07
NPC2-208ENST00000556009 SCGB1A1P11684 91 aa8.36□□□□□ -1.07
NPC2-208ENST00000556009 H1FX-AS1Q4G0G2 97 aa8.36□□□□□ -1.07
NPC2-208ENST00000556009 TRAV22A0A0B4J277 110 aa8.34□□□□□ -1.07
NPC2-208ENST00000556009 C7orf65Q6ZTY9 151 aa8.34□□□□□ -1.07
NPC2-208ENST00000556009 OCR1Q9BZK8 76 aa8.34□□□□□ -1.07
NPC2-208ENST00000556009 FAM236AA0A1B0GUQ0 79 aa8.33□□□□□ -1.08
NPC2-208ENST00000556009 FAM236BA0A1B0GV22 79 aa8.33□□□□□ -1.08
NPC2-208ENST00000556009 KRTAP6-3Q3LI67 103 aa8.3□□□□□ -1.08
NPC2-208ENST00000556009 H0Y9P7 68 aa8.29□□□□□ -1.08
NPC2-208ENST00000556009 ATOX1O00244 68 aa8.26□□□□□ -1.09
NPC2-208ENST00000556009 LOC101927531A0A1B0GV80 90 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms