RNA–Protein interactions for RNA: ENST00000555970.5

NEMF-208, Transcript of nuclear export mediator factor, human

TSL 2

Gene NEMF, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEMF-208	ENST00000555970	SRRM2	Q9UQ35	2752 aa	Known RBP	4.26	□□□□□ -1.73
NEMF-208	ENST00000555970	C8orf17	Q9NRJ1	99 aa		4.26	□□□□□ -1.73
NEMF-208	ENST00000555970	MP68	P56378	58 aa		4.25	□□□□□ -1.73
NEMF-208	ENST00000555970	HYDIN	Q4G0P3	5121 aa		4.25	□□□□□ -1.73
NEMF-208	ENST00000555970	SSBP3-AS1	Q7Z2R9	100 aa		4.25	□□□□□ -1.73
NEMF-208	ENST00000555970	WFDC13	Q8IUB5	93 aa		4.25	□□□□□ -1.73
NEMF-208	ENST00000555970	C1orf64	Q8NEQ6	169 aa		4.25	□□□□□ -1.73
NEMF-208	ENST00000555970		H0Y9P7	68 aa		4.24	□□□□□ -1.73
NEMF-208	ENST00000555970	PKHD1L1	Q86WI1	4243 aa		4.24	□□□□□ -1.73
NEMF-208	ENST00000555970	IGLV7-46	A0A075B6I9	117 aa		4.23	□□□□□ -1.73
NEMF-208	ENST00000555970	IGLV9-49	A0A0B4J1Y8	123 aa		4.23	□□□□□ -1.73
NEMF-208	ENST00000555970	CIRBP-AS1	Q8TBR5	109 aa		4.22	□□□□□ -1.73
NEMF-208	ENST00000555970	LRP1B	Q9NZR2	4599 aa		4.22	□□□□□ -1.73
NEMF-208	ENST00000555970	KRTAP10-2	P60368	255 aa		4.22	□□□□□ -1.73
NEMF-208	ENST00000555970	HRCT1	Q6UXD1	115 aa		4.21	□□□□□ -1.73
NEMF-208	ENST00000555970	MRPL34	Q9BQ48	92 aa	Known RBP	4.21	□□□□□ -1.74
NEMF-208	ENST00000555970	PKHD1	P08F94	4074 aa		4.21	□□□□□ -1.74
NEMF-208	ENST00000555970	C8orf87	E5RJ46	101 aa		4.21	□□□□□ -1.74
NEMF-208	ENST00000555970	KRTAP1-4	P0C5Y4	121 aa		4.21	□□□□□ -1.74
NEMF-208	ENST00000555970	LINC00208	Q96KT6	92 aa		4.2	□□□□□ -1.74
NEMF-208	ENST00000555970	KRTAP9-2	Q9BYQ4	174 aa		4.2	□□□□□ -1.74
NEMF-208	ENST00000555970	KRTAP13-2	Q52LG2	175 aa		4.2	□□□□□ -1.74
NEMF-208	ENST00000555970	C1orf195	Q5TG92	126 aa		4.2	□□□□□ -1.74
NEMF-208	ENST00000555970	VPS13B	Q7Z7G8	4022 aa		4.2	□□□□□ -1.74
NEMF-208	ENST00000555970	KRTAP10-1	P60331	282 aa		4.19	□□□□□ -1.74
NEMF-208	ENST00000555970		Q8N9P0	234 aa	Predicted RBP	4.19	□□□□□ -1.74
NEMF-208	ENST00000555970		A0A087X002	238 aa		4.18	□□□□□ -1.74
NEMF-208	ENST00000555970	KRTAP16-1	A8MUX0	517 aa		4.18	□□□□□ -1.74
NEMF-208	ENST00000555970	RPS29	P62273	56 aa	Known RBP	4.18	□□□□□ -1.74
NEMF-208	ENST00000555970	NOTCH2NL	Q7Z3S9	236 aa		4.18	□□□□□ -1.74
NEMF-208	ENST00000555970	PRO0628	Q9UI54	55 aa		4.18	□□□□□ -1.74
NEMF-208	ENST00000555970	APOB	P04114	4563 aa	Known RBP	4.17	□□□□□ -1.74
NEMF-208	ENST00000555970	LINC00336	Q6ZUF6	198 aa		4.17	□□□□□ -1.74
NEMF-208	ENST00000555970	KRTAP4-12	Q9BQ66	201 aa		4.17	□□□□□ -1.74
NEMF-208	ENST00000555970	ANAPC11	Q9NYG5	84 aa		4.17	□□□□□ -1.74
NEMF-208	ENST00000555970	KRTAP9-6	A0A140TA67	174 aa		4.16	□□□□□ -1.74
NEMF-208	ENST00000555970	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.16	□□□□□ -1.74
NEMF-208	ENST00000555970	LY6G6C	O95867	125 aa		4.16	□□□□□ -1.74
NEMF-208	ENST00000555970		V9GYY9	64 aa		4.16	□□□□□ -1.74
NEMF-208	ENST00000555970	LOC101927531	A0A1B0GV80	90 aa		4.16	□□□□□ -1.74
NEMF-208	ENST00000555970	IGHV6-1	A0A0B4J1U7	121 aa		4.14	□□□□□ -1.75
NEMF-208	ENST00000555970		Q5W150	140 aa		4.13	□□□□□ -1.75
NEMF-208	ENST00000555970	PRR26	Q8N8Z3	221 aa		4.13	□□□□□ -1.75
NEMF-208	ENST00000555970	CDK2AP2	O75956	126 aa		4.12	□□□□□ -1.75
NEMF-208	ENST00000555970	KRTAP10-4	P60372	401 aa	Predicted RBP	4.12	□□□□□ -1.75
NEMF-208	ENST00000555970		A0A1B0GVY2	172 aa		4.12	□□□□□ -1.75
NEMF-208	ENST00000555970	DYNC1H1	Q14204	4646 aa	Known RBP	4.11	□□□□□ -1.75
NEMF-208	ENST00000555970	COA5	Q86WW8	74 aa		4.11	□□□□□ -1.75
NEMF-208	ENST00000555970	LIMD2	Q9BT23	127 aa		4.11	□□□□□ -1.75
NEMF-208	ENST00000555970	LCE3B	Q5TA77	95 aa		4.1	□□□□□ -1.75
NEMF-208	ENST00000555970		Q5VV11	94 aa		4.1	□□□□□ -1.75
NEMF-208	ENST00000555970	SPINK6	Q6UWN8	80 aa		4.1	□□□□□ -1.75
NEMF-208	ENST00000555970		Q75L30	129 aa		4.09	□□□□□ -1.75
NEMF-208	ENST00000555970	FAM229A	H3BQW9	127 aa		4.09	□□□□□ -1.75
NEMF-208	ENST00000555970	MPLKIP	Q8TAP9	179 aa		4.09	□□□□□ -1.75
NEMF-208	ENST00000555970	DMAC1	Q96GE9	116 aa		4.09	□□□□□ -1.75
NEMF-208	ENST00000555970	LINC01558	Q9Y6Z2	57 aa		4.09	□□□□□ -1.75
NEMF-208	ENST00000555970	TG	P01266	2768 aa		4.09	□□□□□ -1.75
NEMF-208	ENST00000555970	SPINK1	P00995	79 aa		4.08	□□□□□ -1.76
NEMF-208	ENST00000555970	IGKV2-30	P06310	120 aa		4.08	□□□□□ -1.76
NEMF-208	ENST00000555970	HRES1	P13985	223 aa		4.08	□□□□□ -1.76
NEMF-208	ENST00000555970	LINC00313	P59037	77 aa		4.08	□□□□□ -1.76
NEMF-208	ENST00000555970	PRR4	Q16378	134 aa		4.07	□□□□□ -1.76
NEMF-208	ENST00000555970	RYR2	Q92736	4967 aa		4.05	□□□□□ -1.76
NEMF-208	ENST00000555970	SPAG11A	Q6PDA7	123 aa		4.05	□□□□□ -1.76
NEMF-208	ENST00000555970	PCOTH	Q58A44	107 aa		4.04	□□□□□ -1.76
NEMF-208	ENST00000555970	TNXB	P22105	4242 aa		4.04	□□□□□ -1.76
NEMF-208	ENST00000555970	NDUFS5	O43920	106 aa		4.04	□□□□□ -1.76
NEMF-208	ENST00000555970		A8MUN3	132 aa		4.03	□□□□□ -1.76
NEMF-208	ENST00000555970	KRTAP19-1	Q8IUB9	90 aa		4.03	□□□□□ -1.77
NEMF-208	ENST00000555970	HSPG2	P98160	4391 aa		4.02	□□□□□ -1.77
NEMF-208	ENST00000555970	PLA2G1B	P04054	148 aa	Known RBP	4.01	□□□□□ -1.77
NEMF-208	ENST00000555970	TYMSOS	Q8TAI1	123 aa		4.01	□□□□□ -1.77
NEMF-208	ENST00000555970	BRK1	Q8WUW1	75 aa		4.01	□□□□□ -1.77
NEMF-208	ENST00000555970	ACYP2	P14621	99 aa		4	□□□□□ -1.77
NEMF-208	ENST00000555970	C20orf166-AS1	Q96NR2	134 aa		4	□□□□□ -1.77
NEMF-208	ENST00000555970	KRTAP4-8	A0A0G2JLE6	195 aa		4	□□□□□ -1.77
NEMF-208	ENST00000555970	PSPHP1	O15172	72 aa		4	□□□□□ -1.77
NEMF-208	ENST00000555970		A8MUU9	505 aa		3.99	□□□□□ -1.77
NEMF-208	ENST00000555970	KRTAP9-9	Q9BYP9	154 aa		3.99	□□□□□ -1.77
NEMF-208	ENST00000555970	KRTAP9-4	Q9BYQ2	154 aa		3.99	□□□□□ -1.77
NEMF-208	ENST00000555970	LINC00304	Q8N9R0	145 aa		3.99	□□□□□ -1.77
NEMF-208	ENST00000555970	IGKV2D-30	A0A075B6S6	120 aa		3.98	□□□□□ -1.77
NEMF-208	ENST00000555970	PRR15L	Q9BU68	103 aa		3.97	□□□□□ -1.77
NEMF-208	ENST00000555970	CDC42SE1	Q9NRR8	79 aa		3.97	□□□□□ -1.77
NEMF-208	ENST00000555970	FAT1	Q14517	4588 aa		3.97	□□□□□ -1.77
NEMF-208	ENST00000555970	LCA10	Q71F78	164 aa		3.97	□□□□□ -1.77
NEMF-208	ENST00000555970	FAT3	Q8TDW7	4589 aa		3.95	□□□□□ -1.78
NEMF-208	ENST00000555970	ATP11AUN	Q6ZP68	121 aa		3.94	□□□□□ -1.78
NEMF-208	ENST00000555970	CHKB-CPT1B	H3BT56	60 aa		3.93	□□□□□ -1.78
NEMF-208	ENST00000555970	C7orf65	Q6ZTY9	151 aa		3.93	□□□□□ -1.78
NEMF-208	ENST00000555970		A8MU10	97 aa		3.92	□□□□□ -1.78
NEMF-208	ENST00000555970	KRTAP19-4	Q3LI73	84 aa		3.92	□□□□□ -1.78
NEMF-208	ENST00000555970		A6NN06	94 aa		3.91	□□□□□ -1.78
NEMF-208	ENST00000555970	KMT2C	Q8NEZ4	4911 aa	Known RBP	3.9	□□□□□ -1.78
NEMF-208	ENST00000555970	KRTAP10-8	P60410	259 aa		3.9	□□□□□ -1.78
NEMF-208	ENST00000555970	LCE1D	Q5T752	114 aa		3.9	□□□□□ -1.78
NEMF-208	ENST00000555970	SPINK7	P58062	85 aa		3.89	□□□□□ -1.79
NEMF-208	ENST00000555970	KRTAP4-7	Q9BYR0	210 aa		3.89	□□□□□ -1.79
NEMF-208	ENST00000555970	SPATA8	Q6RVD6	105 aa		3.88	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms