RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 BATFQ16520 125 aa4.55□□□□□ -1.68
AC004828.1-201ENST00000555303 KRTAP9-8Q9BYQ0 159 aa4.55□□□□□ -1.68
AC004828.1-201ENST00000555303 RBM12B-AS1Q9P1G2 102 aa4.55□□□□□ -1.68
AC004828.1-201ENST00000555303 C8orf87E5RJ46 101 aa4.54□□□□□ -1.68
AC004828.1-201ENST00000555303 K7ERJ3 54 aa4.54□□□□□ -1.68
AC004828.1-201ENST00000555303 MPLKIPQ8TAP9 179 aa4.54□□□□□ -1.68
AC004828.1-201ENST00000555303 IGHV6-1A0A0B4J1U7 121 aa4.53□□□□□ -1.68
AC004828.1-201ENST00000555303 A0A1B0GV72 72 aa4.53□□□□□ -1.68
AC004828.1-201ENST00000555303 HRES1P13985 223 aa4.52□□□□□ -1.69
AC004828.1-201ENST00000555303 A0A1B0GVX0 72 aa4.51□□□□□ -1.69
AC004828.1-201ENST00000555303 J3KT08 172 aa4.51□□□□□ -1.69
AC004828.1-201ENST00000555303 RBM3P98179 157 aaKnown RBP4.51□□□□□ -1.69
AC004828.1-201ENST00000555303 DEFB116Q30KQ4 102 aa4.51□□□□□ -1.69
AC004828.1-201ENST00000555303 NOTCH2NLQ7Z3S9 236 aa4.51□□□□□ -1.69
AC004828.1-201ENST00000555303 DSCR8Q96T75 97 aa4.51□□□□□ -1.69
AC004828.1-201ENST00000555303 MTURNQ8N3F0 131 aa4.5□□□□□ -1.69
AC004828.1-201ENST00000555303 VPS25Q9BRG1 176 aa4.5□□□□□ -1.69
AC004828.1-201ENST00000555303 SCGB1C2P0DMR2 95 aa4.49□□□□□ -1.69
AC004828.1-201ENST00000555303 A0A1B0GW54 56 aa4.48□□□□□ -1.69
AC004828.1-201ENST00000555303 C9JAW5 83 aa4.48□□□□□ -1.69
AC004828.1-201ENST00000555303 TAX1BP3O14907 124 aa4.48□□□□□ -1.69
AC004828.1-201ENST00000555303 MT2AP02795 61 aa4.48□□□□□ -1.69
AC004828.1-201ENST00000555303 ZCCHC13Q8WW36 166 aaKnown RBP4.47□□□□□ -1.69
AC004828.1-201ENST00000555303 USH2AO75445 5202 aa4.46□□□□□ -1.7
AC004828.1-201ENST00000555303 K7ERU9 68 aa4.46□□□□□ -1.7
AC004828.1-201ENST00000555303 NDUFB1O75438 58 aa4.46□□□□□ -1.7
AC004828.1-201ENST00000555303 Q6ZQT0 140 aa4.46□□□□□ -1.7
AC004828.1-201ENST00000555303 JMJD7-PLA2G4BH0Y9G9 81 aa4.45□□□□□ -1.7
AC004828.1-201ENST00000555303 BAALC-AS2P0C853 105 aa4.45□□□□□ -1.7
AC004828.1-201ENST00000555303 SSPOA2VEC9 5147 aa4.45□□□□□ -1.7
AC004828.1-201ENST00000555303 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.44□□□□□ -1.7
AC004828.1-201ENST00000555303 Q8N9P0 234 aaPredicted RBP4.44□□□□□ -1.7
AC004828.1-201ENST00000555303 LOC110117498A0A087WWA1 95 aa4.43□□□□□ -1.7
AC004828.1-201ENST00000555303 MT1FP04733 61 aa4.43□□□□□ -1.7
AC004828.1-201ENST00000555303 SCGB1A1P11684 91 aa4.43□□□□□ -1.7
AC004828.1-201ENST00000555303 PDE6GP18545 87 aa4.43□□□□□ -1.7
AC004828.1-201ENST00000555303 SPINK7P58062 85 aa4.43□□□□□ -1.7
AC004828.1-201ENST00000555303 A8MWP4 228 aa4.42□□□□□ -1.7
AC004828.1-201ENST00000555303 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
AC004828.1-201ENST00000555303 ATXN8Q156A1 80 aa4.42□□□□□ -1.7
AC004828.1-201ENST00000555303 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
AC004828.1-201ENST00000555303 KRTAP9-3Q9BYQ3 159 aa4.41□□□□□ -1.7
AC004828.1-201ENST00000555303 C8orf17Q9NRJ1 99 aa4.41□□□□□ -1.7
AC004828.1-201ENST00000555303 GTF2H5Q6ZYL4 71 aa4.4□□□□□ -1.71
AC004828.1-201ENST00000555303 C9orf118A6NHY6 69 aa4.39□□□□□ -1.71
AC004828.1-201ENST00000555303 K7EP34 96 aa4.39□□□□□ -1.71
AC004828.1-201ENST00000555303 LYRM7Q5U5X0 104 aa4.39□□□□□ -1.71
AC004828.1-201ENST00000555303 IGKV3D-7A0A0C4DH55 119 aa4.38□□□□□ -1.71
AC004828.1-201ENST00000555303 Q6ZVQ6 151 aa4.38□□□□□ -1.71
AC004828.1-201ENST00000555303 WFDC13Q8IUB5 93 aa4.38□□□□□ -1.71
AC004828.1-201ENST00000555303 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
AC004828.1-201ENST00000555303 KRTAP19-1Q8IUB9 90 aa4.36□□□□□ -1.71
AC004828.1-201ENST00000555303 PRR15Q8IV56 129 aa4.36□□□□□ -1.71
AC004828.1-201ENST00000555303 C14orf132Q9NPU4 83 aa4.36□□□□□ -1.71
AC004828.1-201ENST00000555303 LINC00846Q9NV44 126 aa4.36□□□□□ -1.71
AC004828.1-201ENST00000555303 NREPQ16612 68 aa4.35□□□□□ -1.71
AC004828.1-201ENST00000555303 TMEM254Q8TBM7 123 aa4.35□□□□□ -1.71
AC004828.1-201ENST00000555303 A0A1W2PPM0 123 aa4.34□□□□□ -1.71
AC004828.1-201ENST00000555303 MRPL34Q9BQ48 92 aaKnown RBP4.34□□□□□ -1.71
AC004828.1-201ENST00000555303 NAA38Q9BRA0 125 aaKnown RBP4.34□□□□□ -1.71
AC004828.1-201ENST00000555303 MMP24-AS1A0A0U1RRL7 71 aa4.33□□□□□ -1.72
AC004828.1-201ENST00000555303 SPCS1Q9Y6A9 102 aa4.33□□□□□ -1.72
AC004828.1-201ENST00000555303 hDV103S1A0JD37 113 aa4.31□□□□□ -1.72
AC004828.1-201ENST00000555303 H3BT86 120 aa4.3□□□□□ -1.72
AC004828.1-201ENST00000555303 J3QR89 54 aa4.3□□□□□ -1.72
AC004828.1-201ENST00000555303 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
AC004828.1-201ENST00000555303 H1FX-AS1Q4G0G2 97 aa4.3□□□□□ -1.72
AC004828.1-201ENST00000555303 F8W1H4 67 aa4.29□□□□□ -1.72
AC004828.1-201ENST00000555303 K7EQZ3 153 aa4.29□□□□□ -1.72
AC004828.1-201ENST00000555303 NDUFS5O43920 106 aa4.28□□□□□ -1.72
AC004828.1-201ENST00000555303 C7orf65Q6ZTY9 151 aa4.28□□□□□ -1.72
AC004828.1-201ENST00000555303 BPY2O14599 106 aa4.27□□□□□ -1.73
AC004828.1-201ENST00000555303 PRO0461Q9UI25 63 aa4.27□□□□□ -1.73
AC004828.1-201ENST00000555303 IGKV2D-30A0A075B6S6 120 aa4.25□□□□□ -1.73
AC004828.1-201ENST00000555303 IGKV2-30P06310 120 aa4.25□□□□□ -1.73
AC004828.1-201ENST00000555303 ETDBQ3ZM63 59 aa4.23□□□□□ -1.73
AC004828.1-201ENST00000555303 CASC2Q6XLA1 102 aa4.23□□□□□ -1.73
AC004828.1-201ENST00000555303 CXCL6P80162 114 aa4.22□□□□□ -1.73
AC004828.1-201ENST00000555303 Q5W150 140 aa4.21□□□□□ -1.74
AC004828.1-201ENST00000555303 MACF1Q9UPN3 7388 aaKnown RBP4.2□□□□□ -1.74
AC004828.1-201ENST00000555303 HCG22E2RYF7 251 aa4.2□□□□□ -1.74
AC004828.1-201ENST00000555303 MT-ATP8P03928 68 aa4.2□□□□□ -1.74
AC004828.1-201ENST00000555303 Q8N9L7 120 aa4.19□□□□□ -1.74
AC004828.1-201ENST00000555303 C4orf26Q17RF5 130 aa4.17□□□□□ -1.74
AC004828.1-201ENST00000555303 ANAPC13Q9BS18 74 aa4.17□□□□□ -1.74
AC004828.1-201ENST00000555303 UBL5Q9BZL1 73 aa4.17□□□□□ -1.74
AC004828.1-201ENST00000555303 KRTAP6-3Q3LI67 103 aa4.14□□□□□ -1.75
AC004828.1-201ENST00000555303 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
AC004828.1-201ENST00000555303 FAM236AA0A1B0GUQ0 79 aa4.13□□□□□ -1.75
AC004828.1-201ENST00000555303 FAM236BA0A1B0GV22 79 aa4.13□□□□□ -1.75
AC004828.1-201ENST00000555303 S4R3F8 94 aa4.13□□□□□ -1.75
AC004828.1-201ENST00000555303 CCDC179H3BU77 68 aa4.12□□□□□ -1.75
AC004828.1-201ENST00000555303 C5orf47Q569G3 176 aa4.12□□□□□ -1.75
AC004828.1-201ENST00000555303 TP53AIP1Q9HCN2 124 aa4.12□□□□□ -1.75
AC004828.1-201ENST00000555303 CSAG1Q6PB30 78 aa4.11□□□□□ -1.75
AC004828.1-201ENST00000555303 SMIM20Q8N5G0 67 aa4.11□□□□□ -1.75
AC004828.1-201ENST00000555303 C1orf64Q8NEQ6 169 aa4.1□□□□□ -1.75
AC004828.1-201ENST00000555303 KRTAP3-1Q9BYR8 98 aa4.09□□□□□ -1.75
AC004828.1-201ENST00000555303 Q5VV11 94 aa4.08□□□□□ -1.76
AC004828.1-201ENST00000555303 LCA10Q71F78 164 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms